CSPI02G17320 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTAAGGAGCTGTTTACCCTATTTAGGGTCACCCCATTGTGTTAACAACATCAATGATGAGTCAAAAAGCAGAGAGTTGGAGGAAGCTGGTAGGCATCATGGCCACAACAACAACAATAATCAGAATAATAATTCACCTTCTTCATTCGTATCCTCCATTAATTCCAAGCACATTTTCGTGAGAGTAGTCCATGCCGGTGGCAAAGTAGACCATTATCCTAACGCTGTTCTCGCCTCTAAAATCCTTCAAACCCTCCCCGGAAAATGGCTCACTCACCCTCAAGTATTCAAGCAACCACATCAGTCTATCATTTACCCTCAAGAACACCTTCTTCCTGGCCACAAATATTACGTACTTCCTCTTTCAACCATTGACAAGCTCATGAGAAAGCATAGCAACAACAACAACAACAACACCACCGCCATTAGATTCATAATTCCCCAAAATAATACTACTGGTACCAACCAACAAATCGAAACCGCTGATTCCGAAGCTAATATAGATCATCGTGACGGCCATACTCTAGAATCCACGGATCAAGAGGATTTTTCCTTCTATTCTGCAAGAGAATTTTATGCCAACAAAAACAAACGCTCTGCCTCGTCTGCTATGAATGGATCCGGCCGAGGATCGAGAAAGCCTCGGGTTTTGGTGCCATTGCCCAAACCAAAGCCAAAGCCTAAGCCAAAGCCAGTCTCTGCCTATGCCTGGGAGCCTGGCCTTACTTCTATACAAGAGCTTTCTCCATGA ATGTTAAGGAGCTGTTTACCCTATTTAGGGTCACCCCATTGTGTTAACAACATCAATGATGAGTCAAAAAGCAGAGAGTTGGAGGAAGCTGGTAGGCATCATGGCCACAACAACAACAATAATCAGAATAATAATTCACCTTCTTCATTCGTATCCTCCATTAATTCCAAGCACATTTTCGTGAGAGTAGTCCATGCCGGTGGCAAAGTAGACCATTATCCTAACGCTGTTCTCGCCTCTAAAATCCTTCAAACCCTCCCCGGAAAATGGCTCACTCACCCTCAAGTATTCAAGCAACCACATCAGTCTATCATTTACCCTCAAGAACACCTTCTTCCTGGCCACAAATATTACGTACTTCCTCTTTCAACCATTGACAAGCTCATGAGAAAGCATAGCAACAACAACAACAACAACACCACCGCCATTAGATTCATAATTCCCCAAAATAATACTACTGGTACCAACCAACAAATCGAAACCGCTGATTCCGAAGCTAATATAGATCATCGTGACGGCCATACTCTAGAATCCACGGATCAAGAGGATTTTTCCTTCTATTCTGCAAGAGAATTTTATGCCAACAAAAACAAACGCTCTGCCTCGTCTGCTATGAATGGATCCGGCCGAGGATCGAGAAAGCCTCGGGTTTTGGTGCCATTGCCCAAACCAAAGCCAAAGCCTAAGCCAAAGCCAGTCTCTGCCTATGCCTGGGAGCCTGGCCTTACTTCTATACAAGAGCTTTCTCCATGA ATGTTAAGGAGCTGTTTACCCTATTTAGGGTCACCCCATTGTGTTAACAACATCAATGATGAGTCAAAAAGCAGAGAGTTGGAGGAAGCTGGTAGGCATCATGGCCACAACAACAACAATAATCAGAATAATAATTCACCTTCTTCATTCGTATCCTCCATTAATTCCAAGCACATTTTCGTGAGAGTAGTCCATGCCGGTGGCAAAGTAGACCATTATCCTAACGCTGTTCTCGCCTCTAAAATCCTTCAAACCCTCCCCGGAAAATGGCTCACTCACCCTCAAGTATTCAAGCAACCACATCAGTCTATCATTTACCCTCAAGAACACCTTCTTCCTGGCCACAAATATTACGTACTTCCTCTTTCAACCATTGACAAGCTCATGAGAAAGCATAGCAACAACAACAACAACAACACCACCGCCATTAGATTCATAATTCCCCAAAATAATACTACTGGTACCAACCAACAAATCGAAACCGCTGATTCCGAAGCTAATATAGATCATCGTGACGGCCATACTCTAGAATCCACGGATCAAGAGGATTTTTCCTTCTATTCTGCAAGAGAATTTTATGCCAACAAAAACAAACGCTCTGCCTCGTCTGCTATGAATGGATCCGGCCGAGGATCGAGAAAGCCTCGGGTTTTGGTGCCATTGCCCAAACCAAAGCCAAAGCCTAAGCCAAAGCCAGTCTCTGCCTATGCCTGGGAGCCTGGCCTTACTTCTATACAAGAGCTTTCTCCATGA
BLAST of CSPI02G17320 vs. TrEMBL
Match: A0A0A0LND2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G349070 PE=4 SV=1) HSP 1 Score: 495.7 bits (1275), Expect = 3.2e-137 Identity = 248/250 (99.20%), Postives = 249/250 (99.60%), Query Frame = 1
BLAST of CSPI02G17320 vs. TrEMBL
Match: F6GZ14_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0291g00070 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.9e-20 Identity = 76/221 (34.39%), Postives = 113/221 (51.13%), Query Frame = 1
BLAST of CSPI02G17320 vs. TrEMBL
Match: A0A067K4E6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17817 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 5.5e-20 Identity = 86/253 (33.99%), Postives = 123/253 (48.62%), Query Frame = 1
BLAST of CSPI02G17320 vs. TrEMBL
Match: W9RKN0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027712 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.2e-19 Identity = 82/251 (32.67%), Postives = 124/251 (49.40%), Query Frame = 1
BLAST of CSPI02G17320 vs. TrEMBL
Match: B9SPL1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0024980 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 6.1e-19 Identity = 81/223 (36.32%), Postives = 115/223 (51.57%), Query Frame = 1
BLAST of CSPI02G17320 vs. NCBI nr
Match: gi|700207203|gb|KGN62322.1| (hypothetical protein Csa_2G349070 [Cucumis sativus]) HSP 1 Score: 495.7 bits (1275), Expect = 4.6e-137 Identity = 248/250 (99.20%), Postives = 249/250 (99.60%), Query Frame = 1
BLAST of CSPI02G17320 vs. NCBI nr
Match: gi|731436753|ref|XP_010646761.1| (PREDICTED: uncharacterized protein LOC104878311 [Vitis vinifera]) HSP 1 Score: 110.2 bits (274), Expect = 5.5e-21 Identity = 82/252 (32.54%), Postives = 121/252 (48.02%), Query Frame = 1
BLAST of CSPI02G17320 vs. NCBI nr
Match: gi|643713994|gb|KDP26659.1| (hypothetical protein JCGZ_17817 [Jatropha curcas]) HSP 1 Score: 106.3 bits (264), Expect = 7.9e-20 Identity = 86/253 (33.99%), Postives = 123/253 (48.62%), Query Frame = 1
BLAST of CSPI02G17320 vs. NCBI nr
Match: gi|703113497|ref|XP_010100401.1| (hypothetical protein L484_027712 [Morus notabilis]) HSP 1 Score: 105.1 bits (261), Expect = 1.8e-19 Identity = 82/251 (32.67%), Postives = 124/251 (49.40%), Query Frame = 1
BLAST of CSPI02G17320 vs. NCBI nr
Match: gi|255574025|ref|XP_002527930.1| (PREDICTED: uncharacterized protein LOC8273508 [Ricinus communis]) HSP 1 Score: 102.8 bits (255), Expect = 8.7e-19 Identity = 81/223 (36.32%), Postives = 115/223 (51.57%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |