CSPI02G16590 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G16590
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
Description60S ribosomal protein L34
LocationChr2 : 15944427 .. 15946535 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAATAAAGCCCATAGAAAAAAGATTTTTTTTTAAAGGACAAGATTAAATCTCAATCTCGTACTAACCGTCAGATCTAGGGCAGGGCAACGAGGTTAAAATCTCAATCTCAATCTCTGCAGCAGCCCAGAGCAAAGAAGAGAAAATGGTGCAGCGTCTTACATACCGCAAGCGCCATAGCTATGCTACCAAGTCTAACCAGCACCGCGTCGTCAAAACCCCTGGTAAACTATCGGATTCCTTCCCATAGCTATTCTATCAAGTGTTTTTTAACTTCAATGTCAATCAATCGGTTTTCGTATTTATTGTTTCTGCTTTTATCATCTCCTTCTATTTTGTGTTTAGGTGGGAAGCTTGTGTATCAGACTACCAAGAAAAGAGCTAGCGGACCCAAATGTCCGGTTACCGGCAAAAGGATTCAGGGGGTATGTATTTGATTACTCTTATCTGCTTCTTTTATCACTTAATCTTATTTGTGTTTTGCTTTTTTTAGGATGGTTATATTATCTCTTTGTACTTTAGATCTTTGCGGTAAATACCTTTGAAACTTGTTTTGTTGATAAGGAAAGATGAAATAAAAACTGATGCAGAAAGTTTGTTCTAGTTGCCGCATTTGTGTTGCATTAGAGAAAAAAATGGTTTCCCCTTACTGAAATTTTGGATTTTGGTTCTTTGTGATCGTTACACACCACCTTTTACTGAATATTTTAGTTGTTTTTTTTTCTCAGTTCATTTGTACTTTTTGTTTCCCTTTGTAAAAAAATAACTATGGCAGAGTGGTTTCTGATTGAGTTGTTATTAACGAATATTAAATGAATCTTGATTGGTTGATGCATGCATGTAAATTCTTGCATATACTGCTCTTATACCTTTGTTTGAATATCATATTTTTCACAGAAGGGTAAATTTATATTACTTCTCTTTAATGGTCGGAAGGATTCTTCACTGACCTAAACTTGTTTCAGATTTTTTTTAAAAAAAGGAATGCATTCGAGAACGTGTAGAACCGTATATTAAGTTGATTCAGAAAGTTCAAATCTTCAGTCTTTTAAACTGCATCCTAATGACACTCCTGCGGAATGTGCTTTCATTTTATATGTTAAGATAAGATAGCTGCATTATCTTAGGTCTGTCTTCCAAAAGTTGTGAATGGTTTTTGGGTTTTCAATTTTGCAAATACATATATTAATATGCACATTTTTGCACCACAGCAACATGTGTATCTATACTAAATTGGATCATTGTGGATTGGTTGATGCATGCATGTAAATTTTTGCAAGTTACATTCATTGTTTATATGCCGGTAGTCGCACATGCATTTACATTTGGTACTTTGGCTGTATTTTGAACTAAATGATAGTTTTCTAAATTTAAGTTTGTTTTTTAGAAGAGCGATATTTGTATTTTCGTTCATTTCTAATAATCTGACATAAACTCGGAATTTACGTGAAGATGGTTCAATCCTAATTTTGTGTTAAGTTAATCTGTGTAAGTTTATGATTATTGCAGATTCCTCACTTGAGGCCAGCTGAATACAAGAGGTCTAGACTAGCTAGGAACAGGAGGACTGTGAATCGTGCATACGGTGGCGTTTTATCTGGCAGTGCTGTGAGGGAGAGGTTGGCTTCCCACTCTTTCTCATCACTTGTTTTCTCATCTCTTTGATTATATTTATGGTAGTTAAGCATTGTGCTAATCCTTATTTTGGTTTGGGATAGGATCATCCGGGCCTTTTTGGTGGAAGAGCAGAAGATTGTGAAGAAGGTATTGAAGATTCAGAAGGCGAAGGAAAAGCTGGCATCAAAGAGCTAAATTAATTGTGTTGAAATTTTGACTTTTTTTGTGACGTGATGTTGAATTTTAGCAATTACTATTTAAAGTTTGTTTTTGGAAGAACGAGATTTTAGCTCCGGAGTTCCCTTCAATGATATCATGACATTTTTTTCCCTAGTTTTTATAATGGCATTTCTTCAACAAATTTCTTCAAGACCGTTTGATTAAGTATCTCCTTTCCCTTGTCTGCGGTTTTCCTCGAATTAAAATGTGTTCTGCTTATGGTGTTTTTGTGGGAAAAGCGACGACCATGAAATTTGGTTTGGCATCCGACCC

mRNA sequence

ATGGTGCAGCGTCTTACATACCGCAAGCGCCATAGCTATGCTACCAAGTCTAACCAGCACCGCGTCGTCAAAACCCCTGGTGGGAAGCTTGTGTATCAGACTACCAAGAAAAGAGCTAGCGGACCCAAATGTCCGGTTACCGGCAAAAGGATTCAGGGGATTCCTCACTTGAGGCCAGCTGAATACAAGAGGTCTAGACTAGCTAGGAACAGGAGGACTGTGAATCGTGCATACGGTGGCGTTTTATCTGGCAGTGCTGTGAGGGAGAGGATCATCCGGGCCTTTTTGGTGGAAGAGCAGAAGATTGTGAAGAAGGTATTGAAGATTCAGAAGGCGAAGGAAAAGCTGGCATCAAAGAGCTAA

Coding sequence (CDS)

ATGGTGCAGCGTCTTACATACCGCAAGCGCCATAGCTATGCTACCAAGTCTAACCAGCACCGCGTCGTCAAAACCCCTGGTGGGAAGCTTGTGTATCAGACTACCAAGAAAAGAGCTAGCGGACCCAAATGTCCGGTTACCGGCAAAAGGATTCAGGGGATTCCTCACTTGAGGCCAGCTGAATACAAGAGGTCTAGACTAGCTAGGAACAGGAGGACTGTGAATCGTGCATACGGTGGCGTTTTATCTGGCAGTGCTGTGAGGGAGAGGATCATCCGGGCCTTTTTGGTGGAAGAGCAGAAGATTGTGAAGAAGGTATTGAAGATTCAGAAGGCGAAGGAAAAGCTGGCATCAAAGAGCTAA
Homology
[Close]
BLAST of CSPI02G16590 vs. Swiss-Prot
Match: RL34_TOBAC (60S ribosomal protein L34 OS=Nicotiana tabacum GN=RPL34 PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 3.9e-57
Identity = 115/120 (95.83%), Postives = 119/120 (99.17%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA+KS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120

[Close]
BLAST of CSPI02G16590 vs. Swiss-Prot
Match: RL341_ARATH (60S ribosomal protein L34-1 OS=Arabidopsis thaliana GN=RPL34A PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 2.1e-55
Identity = 111/120 (92.50%), Postives = 117/120 (97.50%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPKA 120

[Close]
BLAST of CSPI02G16590 vs. Swiss-Prot
Match: RL34_PEA (60S ribosomal protein L34 OS=Pisum sativum GN=RPL34 PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 2.1e-55
Identity = 112/120 (93.33%), Postives = 116/120 (96.67%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYR+RHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLKIQK KEK A+K+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQAAKN 120

[Close]
BLAST of CSPI02G16590 vs. Swiss-Prot
Match: RL342_ARATH (60S ribosomal protein L34-2 OS=Arabidopsis thaliana GN=RPL34B PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.1e-54
Identity = 110/119 (92.44%), Postives = 114/119 (95.80%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASK 120
           EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPK 119

[Close]
BLAST of CSPI02G16590 vs. Swiss-Prot
Match: RL343_ARATH (60S ribosomal protein L34-3 OS=Arabidopsis thaliana GN=RPL34C PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 9.0e-54
Identity = 109/120 (90.83%), Postives = 112/120 (93.33%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQKIVKKVLK+QKAKEK A KS
Sbjct: 61  EYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAFLVEEQKIVKKVLKLQKAKEKTAPKS 120

[Close]
BLAST of CSPI02G16590 vs. TrEMBL
Match: A0A0A0LK03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G338890 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 7.9e-57
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CSPI02G16590 vs. TrEMBL
Match: A0A0A0LP37_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G009690 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.8e-56
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNRAYGGV+SGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVVSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CSPI02G16590 vs. TrEMBL
Match: A0A059D9F6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03442 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 5.1e-56
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CSPI02G16590 vs. TrEMBL
Match: A0A068TVQ9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032233001 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 5.1e-56
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           M QRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA+KS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120

[Close]
BLAST of CSPI02G16590 vs. TrEMBL
Match: K4BBU9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 5.1e-56
Identity = 117/120 (97.50%), Postives = 119/120 (99.17%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHR+VKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRIVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLPRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CSPI02G16590 vs. TAIR10
Match: AT1G26880.1 (AT1G26880.1 Ribosomal protein L34e superfamily protein)

HSP 1 Score: 216.1 bits (549), Expect = 1.2e-56
Identity = 111/120 (92.50%), Postives = 117/120 (97.50%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPKA 120

[Close]
BLAST of CSPI02G16590 vs. TAIR10
Match: AT1G69620.1 (AT1G69620.1 ribosomal protein L34)

HSP 1 Score: 213.8 bits (543), Expect = 6.0e-56
Identity = 110/119 (92.44%), Postives = 114/119 (95.80%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASK 120
           EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPK 119

[Close]
BLAST of CSPI02G16590 vs. TAIR10
Match: AT3G28900.1 (AT3G28900.1 Ribosomal protein L34e superfamily protein)

HSP 1 Score: 210.7 bits (535), Expect = 5.1e-55
Identity = 109/120 (90.83%), Postives = 112/120 (93.33%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQKIVKKVLK+QKAKEK A KS
Sbjct: 61  EYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAFLVEEQKIVKKVLKLQKAKEKTAPKS 120

[Close]
BLAST of CSPI02G16590 vs. NCBI nr
Match: gi|449459176|ref|XP_004147322.1| (PREDICTED: 60S ribosomal protein L34 [Cucumis sativus])

HSP 1 Score: 227.6 bits (579), Expect = 1.1e-56
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CSPI02G16590 vs. NCBI nr
Match: gi|778655948|ref|XP_004138165.2| (PREDICTED: 60S ribosomal protein L34-like [Cucumis sativus])

HSP 1 Score: 226.5 bits (576), Expect = 2.5e-56
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNRAYGGV+SGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVVSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CSPI02G16590 vs. NCBI nr
Match: gi|702277736|ref|XP_010044743.1| (PREDICTED: 60S ribosomal protein L34 [Eucalyptus grandis])

HSP 1 Score: 224.9 bits (572), Expect = 7.4e-56
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CSPI02G16590 vs. NCBI nr
Match: gi|661895753|emb|CDP00331.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 224.9 bits (572), Expect = 7.4e-56
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           M QRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA+KS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120

[Close]
BLAST of CSPI02G16590 vs. NCBI nr
Match: gi|460372822|ref|XP_004232223.1| (PREDICTED: 60S ribosomal protein L34 [Solanum lycopersicum])

HSP 1 Score: 224.9 bits (572), Expect = 7.4e-56
Identity = 117/120 (97.50%), Postives = 119/120 (99.17%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHR+VKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRIVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLPRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

The following BLAST results are available for this feature:
BLAST of CSPI02G16590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL34_TOBAC3.9e-5795.8360S ribosomal protein L34 OS=Nicotiana tabacum GN=RPL34 PE=2 SV=1[more]
RL341_ARATH2.1e-5592.5060S ribosomal protein L34-1 OS=Arabidopsis thaliana GN=RPL34A PE=2 SV=1[more]
RL34_PEA2.1e-5593.3360S ribosomal protein L34 OS=Pisum sativum GN=RPL34 PE=2 SV=1[more]
RL342_ARATH1.1e-5492.4460S ribosomal protein L34-2 OS=Arabidopsis thaliana GN=RPL34B PE=3 SV=1[more]
RL343_ARATH9.0e-5490.8360S ribosomal protein L34-3 OS=Arabidopsis thaliana GN=RPL34C PE=2 SV=1[more]
BLAST of CSPI02G16590 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LK03_CUCSA7.9e-57100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G338890 PE=4 SV=1[more]
A0A0A0LP37_CUCSA1.8e-5699.17Uncharacterized protein OS=Cucumis sativus GN=Csa_1G009690 PE=4 SV=1[more]
A0A059D9F6_EUCGR5.1e-5698.33Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03442 PE=4 SV=1[more]
A0A068TVQ9_COFCA5.1e-5698.33Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032233001 PE=4 SV=1[more]
K4BBU9_SOLLC5.1e-5697.50Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
BLAST of CSPI02G16590 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G26880.11.2e-5692.50 Ribosomal protein L34e superfamily protein[more]
AT1G69620.16.0e-5692.44 ribosomal protein L34[more]
AT3G28900.15.1e-5590.83 Ribosomal protein L34e superfamily protein[more]
BLAST of CSPI02G16590 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449459176|ref|XP_004147322.1|1.1e-56100.00PREDICTED: 60S ribosomal protein L34 [Cucumis sativus][more]
gi|778655948|ref|XP_004138165.2|2.5e-5699.17PREDICTED: 60S ribosomal protein L34-like [Cucumis sativus][more]
gi|702277736|ref|XP_010044743.1|7.4e-5698.33PREDICTED: 60S ribosomal protein L34 [Eucalyptus grandis][more]
gi|661895753|emb|CDP00331.1|7.4e-5698.33unnamed protein product [Coffea canephora][more]
gi|460372822|ref|XP_004232223.1|7.4e-5697.50PREDICTED: 60S ribosomal protein L34 [Solanum lycopersicum][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0022625 cytosolic large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G16590.1CSPI02G16590.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G16590Csa2G338890Cucumber (Chinese Long) v2cpicuB065
CSPI02G16590MELO3C023201Melon (DHL92) v3.5.1cpimeB094
CSPI02G16590MELO3C034552.2Melon (DHL92) v3.6.1cpimedB085
CSPI02G16590CsaV3_2G019790Cucumber (Chinese Long) v3cpicucB082
CSPI02G16590Cucsa.228030Cucumber (Gy14) v1cgycpiB339
CSPI02G16590CsGy2G016160Cucumber (Gy14) v2cgybcpiB058
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G16590Watermelon (Charleston Gray)cpiwcgB126
CSPI02G16590Watermelon (97103) v1cpiwmB152
CSPI02G16590Bottle gourd (USVL1VR-Ls)cpilsiB095
CSPI02G16590Watermelon (97103) v2cpiwmbB119
CSPI02G16590Wax gourdcpiwgoB183