CSPI02G10850 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G10850
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr2 : 11122782 .. 11123063 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAGAGGGCATCGACGAAGGTAAAGAATGGCGTCGGCAAAAGTTCTCCCATCGCAATTCTGCATGTCAGAATGATTGTCGGGAAACCTGCATTGGGATATCCATTCCTGACGAGCAAAGATCAAAGCATCGCGAATTCCTGTCCCCCGACATCTCTTTTACAGACGACGGAATCACGTCGAAGAAACTGCACTCCCAATGTCAGCATGTGACATCGGGCATAGGACTCTGTCGACGTATCTTCAGGCGTCAAAAGAAGAATTATCTCAACATTACCTAG

mRNA sequence

ATGCTAGAGGGCATCGACGAAGGTAAAGAATGGCGTCGGCAAAAGTTCTCCCATCGCAATTCTGCATGTCAGAATGATTGTCGGGAAACCTGCATTGGGATATCCATTCCTGACGAGCAAAGATCAAAGCATCGCGAATTCCTGTCCCCCGACATCTCTTTTACAGACGACGGAATCACGTCGAAGAAACTGCACTCCCAATGTCAGCATGTGACATCGGGCATAGGACTCTGTCGACGTATCTTCAGGCGTCAAAAGAAGAATTATCTCAACATTACCTAG

Coding sequence (CDS)

ATGCTAGAGGGCATCGACGAAGGTAAAGAATGGCGTCGGCAAAAGTTCTCCCATCGCAATTCTGCATGTCAGAATGATTGTCGGGAAACCTGCATTGGGATATCCATTCCTGACGAGCAAAGATCAAAGCATCGCGAATTCCTGTCCCCCGACATCTCTTTTACAGACGACGGAATCACGTCGAAGAAACTGCACTCCCAATGTCAGCATGTGACATCGGGCATAGGACTCTGTCGACGTATCTTCAGGCGTCAAAAGAAGAATTATCTCAACATTACCTAG
Homology
[Close]
BLAST of CSPI02G10850 vs. TrEMBL
Match: A0A0A0LNS2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G213960 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.9e-19
Identity = 47/48 (97.92%), Postives = 47/48 (97.92%), Query Frame = 1 

Query: 1  MLEGIDEGKEWRRQKFSHRNSACQNDCRETCIGISIPDEQRSKHREFL 49
          MLEGIDEGKEWRRQKFSHRNSACQNDCRET IGISIPDEQRSKHREFL
Sbjct: 1  MLEGIDEGKEWRRQKFSHRNSACQNDCRETRIGISIPDEQRSKHREFL 48

[Close]
BLAST of CSPI02G10850 vs. NCBI nr
Match: gi|700206532|gb|KGN61651.1| (hypothetical protein Csa_2G213960 [Cucumis sativus])

HSP 1 Score: 102.1 bits (253), Expect = 5.6e-19
Identity = 47/48 (97.92%), Postives = 47/48 (97.92%), Query Frame = 1 

Query: 1  MLEGIDEGKEWRRQKFSHRNSACQNDCRETCIGISIPDEQRSKHREFL 49
          MLEGIDEGKEWRRQKFSHRNSACQNDCRET IGISIPDEQRSKHREFL
Sbjct: 1  MLEGIDEGKEWRRQKFSHRNSACQNDCRETRIGISIPDEQRSKHREFL 48

The following BLAST results are available for this feature:
BLAST of CSPI02G10850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G10850 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNS2_CUCSA3.9e-1997.92Uncharacterized protein OS=Cucumis sativus GN=Csa_2G213960 PE=4 SV=1[more]
BLAST of CSPI02G10850 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI02G10850 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206532|gb|KGN61651.1|5.6e-1997.92hypothetical protein Csa_2G213960 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G10850.1CSPI02G10850.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G10850Csa2G213960Cucumber (Chinese Long) v2cpicuB065
CSPI02G10850CsaV3_2G013290Cucumber (Chinese Long) v3cpicucB080
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G10850Cucumber (Gy14) v1cgycpiB378
CSPI02G10850Cucumber (Gy14) v1cgycpiB572
CSPI02G10850Cucurbita maxima (Rimu)cmacpiB240
CSPI02G10850Cucurbita maxima (Rimu)cmacpiB354
CSPI02G10850Cucurbita maxima (Rimu)cmacpiB514
CSPI02G10850Cucurbita maxima (Rimu)cmacpiB825
CSPI02G10850Cucurbita maxima (Rimu)cmacpiB899
CSPI02G10850Cucurbita moschata (Rifu)cmocpiB228
CSPI02G10850Cucurbita moschata (Rifu)cmocpiB346
CSPI02G10850Cucurbita moschata (Rifu)cmocpiB812
CSPI02G10850Cucurbita moschata (Rifu)cmocpiB879
CSPI02G10850Cucumber (Chinese Long) v2cpicuB069
CSPI02G10850Melon (DHL92) v3.5.1cpimeB137
CSPI02G10850Melon (DHL92) v3.5.1cpimeB143
CSPI02G10850Melon (DHL92) v3.5.1cpimeB144
CSPI02G10850Watermelon (Charleston Gray)cpiwcgB139
CSPI02G10850Watermelon (Charleston Gray)cpiwcgB141
CSPI02G10850Watermelon (Charleston Gray)cpiwcgB156
CSPI02G10850Watermelon (Charleston Gray)cpiwcgB163
CSPI02G10850Watermelon (97103) v1cpiwmB125
CSPI02G10850Watermelon (97103) v1cpiwmB121
CSPI02G10850Watermelon (97103) v1cpiwmB156
CSPI02G10850Watermelon (97103) v1cpiwmB174
CSPI02G10850Cucurbita pepo (Zucchini)cpecpiB126
CSPI02G10850Cucurbita pepo (Zucchini)cpecpiB240
CSPI02G10850Cucurbita pepo (Zucchini)cpecpiB306
CSPI02G10850Cucurbita pepo (Zucchini)cpecpiB598
CSPI02G10850Cucurbita pepo (Zucchini)cpecpiB851
CSPI02G10850Bottle gourd (USVL1VR-Ls)cpilsiB085
CSPI02G10850Bottle gourd (USVL1VR-Ls)cpilsiB125
CSPI02G10850Bottle gourd (USVL1VR-Ls)cpilsiB127
CSPI02G10850Melon (DHL92) v3.6.1cpimedB136
CSPI02G10850Melon (DHL92) v3.6.1cpimedB130
CSPI02G10850Melon (DHL92) v3.6.1cpimedB137
CSPI02G10850Cucumber (Gy14) v2cgybcpiB056
CSPI02G10850Cucumber (Gy14) v2cgybcpiB100
CSPI02G10850Silver-seed gourdcarcpiB0259
CSPI02G10850Silver-seed gourdcarcpiB0265
CSPI02G10850Silver-seed gourdcarcpiB0354
CSPI02G10850Silver-seed gourdcarcpiB0782
CSPI02G10850Silver-seed gourdcarcpiB0995
CSPI02G10850Cucumber (Chinese Long) v3cpicucB086
CSPI02G10850Cucumber (Chinese Long) v3cpicucB088
CSPI02G10850Watermelon (97103) v2cpiwmbB131
CSPI02G10850Watermelon (97103) v2cpiwmbB133
CSPI02G10850Watermelon (97103) v2cpiwmbB149
CSPI02G10850Watermelon (97103) v2cpiwmbB157
CSPI02G10850Wax gourdcpiwgoB128
CSPI02G10850Wax gourdcpiwgoB143
CSPI02G10850Wax gourdcpiwgoB148
CSPI02G10850Wax gourdcpiwgoB210
CSPI02G10850Wild cucumber (PI 183967)cpicpiB056
CSPI02G10850Wild cucumber (PI 183967)cpicpiB057