CSPI02G08300 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G08300
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr2 : 7792976 .. 7793467 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATGATGCAAACAAAACGGAGATATGTAGATTATCATGTGTTAAAACCCAAAGTTCTTTCAACCAAAGTTACAACGGCCATGAAACCATATAACATTTACCAAAGAAAGGAATCCAAGAGTGATCGTGAATTGGCAAATTACTTCAAATGCCCATCACCAAAGAAGAATAACATTGAGCTATTGCCCATAAAGCCAAACACTACTATTGTAGTGTTGTCACCAAGACGGGCTGCTCGAGTTGAAGTGCTAAAAGCCAAATTTGGAAGCACCATTTTGAAGGCTCAACAAAAACTTCAAAATTCCAATAATGATTCTAATAAGTATGAATATGTTGTCGTTGGTGCGACTCCAAAGGCATGCTCAATATTACAAGAACAAAAACGAGCTTCAAGGGAAGCTCTTGACAAGATCAACCCAGTGTTTAATTTCAACGAGAATCTCGATTCCATGAGAGAATTTGAAAAGATATTGGAGTCGGGCGCTTGA

mRNA sequence

ATGAAGATGATGCAAACAAAACGGAGATATGTAGATTATCATGTGTTAAAACCCAAAGTTCTTTCAACCAAAGTTACAACGGCCATGAAACCATATAACATTTACCAAAGAAAGGAATCCAAGAGTGATCGTGAATTGGCAAATTACTTCAAATGCCCATCACCAAAGAAGAATAACATTGAGCTATTGCCCATAAAGCCAAACACTACTATTGTAGTGTTGTCACCAAGACGGGCTGCTCGAGTTGAAGTGCTAAAAGCCAAATTTGGAAGCACCATTTTGAAGGCTCAACAAAAACTTCAAAATTCCAATAATGATTCTAATAAGTATGAATATGTTGTCGTTGGTGCGACTCCAAAGGCATGCTCAATATTACAAGAACAAAAACGAGCTTCAAGGGAAGCTCTTGACAAGATCAACCCAGTGTTTAATTTCAACGAGAATCTCGATTCCATGAGAGAATTTGAAAAGATATTGGAGTCGGGCGCTTGA

Coding sequence (CDS)

ATGAAGATGATGCAAACAAAACGGAGATATGTAGATTATCATGTGTTAAAACCCAAAGTTCTTTCAACCAAAGTTACAACGGCCATGAAACCATATAACATTTACCAAAGAAAGGAATCCAAGAGTGATCGTGAATTGGCAAATTACTTCAAATGCCCATCACCAAAGAAGAATAACATTGAGCTATTGCCCATAAAGCCAAACACTACTATTGTAGTGTTGTCACCAAGACGGGCTGCTCGAGTTGAAGTGCTAAAAGCCAAATTTGGAAGCACCATTTTGAAGGCTCAACAAAAACTTCAAAATTCCAATAATGATTCTAATAAGTATGAATATGTTGTCGTTGGTGCGACTCCAAAGGCATGCTCAATATTACAAGAACAAAAACGAGCTTCAAGGGAAGCTCTTGACAAGATCAACCCAGTGTTTAATTTCAACGAGAATCTCGATTCCATGAGAGAATTTGAAAAGATATTGGAGTCGGGCGCTTGA
Homology
[Close]
BLAST of CSPI02G08300 vs. TrEMBL
Match: A0A0A0KMZ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G164650 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 3.6e-68
Identity = 138/158 (87.34%), Postives = 146/158 (92.41%), Query Frame = 1 

Query: 1   MKMMQTKRRYVDYHVLKPKVLSTKVTTAMKPYNIYQRKESKSDRELANYFKCPSPKKNNI 60
           M+MMQTKRRY+DYH+LKPKVLSTKVT  MKPYNI+QRKES  D EL N FKC SPKKNNI
Sbjct: 1   MRMMQTKRRYIDYHMLKPKVLSTKVTKTMKPYNIHQRKESNGDHELTN-FKCLSPKKNNI 60

Query: 61  ELLPIKPNTTIVVLSPRRAARVEVLKAKFGSTILKAQQKLQNSNNDSNKYEYVVVGATPK 120
           ELLPIKPNTTIVVLSPRRAARVEVLKAKFGSTI KAQQKLQ SNNDSNKYEYVV+GATPK
Sbjct: 61  ELLPIKPNTTIVVLSPRRAARVEVLKAKFGSTIWKAQQKLQKSNNDSNKYEYVVIGATPK 120

Query: 121 ACSILQEQKRASREALDK-INPVFNFNENLDSMREFEK 158
            CSILQEQKRASREALDK INPVF+FNENLDSM+EFE+
Sbjct: 121 TCSILQEQKRASREALDKMINPVFDFNENLDSMKEFER 157

[Close]
BLAST of CSPI02G08300 vs. TrEMBL
Match: A0A0A0KRB6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G162640 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.3e-46
Identity = 108/133 (81.20%), Postives = 117/133 (87.97%), Query Frame = 1 

Query: 29  MKPYNIYQRKESKSDRELANYFKCPSPKKNNIELLPIKPNTTIVVLSPRRAARVEVLKAK 88
           M PYNI+Q KES SD +LAN FKCPSPK NNI +LPIKPNT IVVLSPRRAARVEVLKAK
Sbjct: 1   MTPYNIHQIKESNSDHDLAN-FKCPSPK-NNIAVLPIKPNT-IVVLSPRRAARVEVLKAK 60

Query: 89  FGSTILKAQQKLQNSNNDSNKYEYVVVGATPKACSILQEQKRASREALDKINPVFNFNEN 148
           FGSTILKAQQKL NSNNDSNK+EY +VGATP  CSI QEQ++A REALDKINP F+FNEN
Sbjct: 61  FGSTILKAQQKLHNSNNDSNKHEY-IVGATPNICSI-QEQRQALREALDKINPAFDFNEN 120

Query: 149 LDSMREFEKILES 162
           LDSMREF K+LES
Sbjct: 121 LDSMREFAKLLES 128

[Close]
BLAST of CSPI02G08300 vs. NCBI nr
Match: gi|700195092|gb|KGN50269.1| (hypothetical protein Csa_5G164650 [Cucumis sativus])

HSP 1 Score: 265.8 bits (678), Expect = 5.1e-68
Identity = 138/158 (87.34%), Postives = 146/158 (92.41%), Query Frame = 1 

Query: 1   MKMMQTKRRYVDYHVLKPKVLSTKVTTAMKPYNIYQRKESKSDRELANYFKCPSPKKNNI 60
           M+MMQTKRRY+DYH+LKPKVLSTKVT  MKPYNI+QRKES  D EL N FKC SPKKNNI
Sbjct: 1   MRMMQTKRRYIDYHMLKPKVLSTKVTKTMKPYNIHQRKESNGDHELTN-FKCLSPKKNNI 60

Query: 61  ELLPIKPNTTIVVLSPRRAARVEVLKAKFGSTILKAQQKLQNSNNDSNKYEYVVVGATPK 120
           ELLPIKPNTTIVVLSPRRAARVEVLKAKFGSTI KAQQKLQ SNNDSNKYEYVV+GATPK
Sbjct: 61  ELLPIKPNTTIVVLSPRRAARVEVLKAKFGSTIWKAQQKLQKSNNDSNKYEYVVIGATPK 120

Query: 121 ACSILQEQKRASREALDK-INPVFNFNENLDSMREFEK 158
            CSILQEQKRASREALDK INPVF+FNENLDSM+EFE+
Sbjct: 121 TCSILQEQKRASREALDKMINPVFDFNENLDSMKEFER 157

[Close]
BLAST of CSPI02G08300 vs. NCBI nr
Match: gi|700195089|gb|KGN50266.1| (hypothetical protein Csa_5G162640 [Cucumis sativus])

HSP 1 Score: 194.1 bits (492), Expect = 1.9e-46
Identity = 108/133 (81.20%), Postives = 117/133 (87.97%), Query Frame = 1 

Query: 29  MKPYNIYQRKESKSDRELANYFKCPSPKKNNIELLPIKPNTTIVVLSPRRAARVEVLKAK 88
           M PYNI+Q KES SD +LAN FKCPSPK NNI +LPIKPNT IVVLSPRRAARVEVLKAK
Sbjct: 1   MTPYNIHQIKESNSDHDLAN-FKCPSPK-NNIAVLPIKPNT-IVVLSPRRAARVEVLKAK 60

Query: 89  FGSTILKAQQKLQNSNNDSNKYEYVVVGATPKACSILQEQKRASREALDKINPVFNFNEN 148
           FGSTILKAQQKL NSNNDSNK+EY +VGATP  CSI QEQ++A REALDKINP F+FNEN
Sbjct: 61  FGSTILKAQQKLHNSNNDSNKHEY-IVGATPNICSI-QEQRQALREALDKINPAFDFNEN 120

Query: 149 LDSMREFEKILES 162
           LDSMREF K+LES
Sbjct: 121 LDSMREFAKLLES 128

The following BLAST results are available for this feature:
BLAST of CSPI02G08300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G08300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMZ1_CUCSA3.6e-6887.34Uncharacterized protein OS=Cucumis sativus GN=Csa_5G164650 PE=4 SV=1[more]
A0A0A0KRB6_CUCSA1.3e-4681.20Uncharacterized protein OS=Cucumis sativus GN=Csa_5G162640 PE=4 SV=1[more]
BLAST of CSPI02G08300 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI02G08300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700195092|gb|KGN50269.1|5.1e-6887.34hypothetical protein Csa_5G164650 [Cucumis sativus][more]
gi|700195089|gb|KGN50266.1|1.9e-4681.20hypothetical protein Csa_5G162640 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G08300.1CSPI02G08300.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G08300CsaV3_2G010700Cucumber (Chinese Long) v3cpicucB080
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G08300Watermelon (97103) v2cpiwmbB107
CSPI02G08300Watermelon (97103) v2cpiwmbB111
CSPI02G08300Wax gourdcpiwgoB140
CSPI02G08300Cucurbita maxima (Rimu)cmacpiB444
CSPI02G08300Cucurbita maxima (Rimu)cmacpiB802
CSPI02G08300Cucurbita moschata (Rifu)cmocpiB433
CSPI02G08300Cucurbita moschata (Rifu)cmocpiB784
CSPI02G08300Cucumber (Chinese Long) v2cpicuB065
CSPI02G08300Melon (DHL92) v3.5.1cpimeB142
CSPI02G08300Watermelon (Charleston Gray)cpiwcgB105
CSPI02G08300Watermelon (97103) v1cpiwmB160
CSPI02G08300Watermelon (97103) v1cpiwmB168
CSPI02G08300Cucurbita pepo (Zucchini)cpecpiB103
CSPI02G08300Cucurbita pepo (Zucchini)cpecpiB539
CSPI02G08300Bottle gourd (USVL1VR-Ls)cpilsiB096
CSPI02G08300Melon (DHL92) v3.6.1cpimedB135
CSPI02G08300Cucumber (Gy14) v2cgybcpiB056
CSPI02G08300Silver-seed gourdcarcpiB0734