CSPI02G04860 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTTCTTCAACATATTTTTTGTCATCTCAATTGTGGCTTACCTTGTTCATCGTTTTGATCACCGTTTTTCAGTTGGCTATAGCAGCTGATAGTGGAACTGAAGATAAAATCAAGAGAATATGTCGTCAGATGGAAGAGTTTGAGTTTTGCAGCCAAACCTTCCATCAGAATTTGAAAGGTGGTTCAGCAGACTATATAGGACTAACTGAAATAGCAAACAATCAAGTGTATACGAAGGCATCCAGTACACTTGTTTACATTGAACAACTTTTGAGAAGCGTAAGTGATCCAACAACAAGGAAGGCGTTACTAGTGTGTGAAAATGGATATTATGCAGTAAATGAAGCATTTGTAGAAGGGATCCGGTGGTTCTCACAAAAATATTACAAGGAAATGTTGAATGTTGAGAGGAGAGCACCAAGCGCACAAGCAAGTTGTACTTCGATATTCACCACTACACCACCACCCAAACAAAACCCACTTTTTCAAATTAATAGAGAGATGAGAATTCTCATTGCTATGGCTATAGTATCAGGCTCTAGCATTGGTTGA ATGACTTCTTCAACATATTTTTTGTCATCTCAATTGTGGCTTACCTTGTTCATCGTTTTGATCACCGTTTTTCAGTTGGCTATAGCAGCTGATAGTGGAACTGAAGATAAAATCAAGAGAATATGTCGTCAGATGGAAGAGTTTGAGTTTTGCAGCCAAACCTTCCATCAGAATTTGAAAGGTGGTTCAGCAGACTATATAGGACTAACTGAAATAGCAAACAATCAAGTGTATACGAAGGCATCCAGTACACTTGTTTACATTGAACAACTTTTGAGAAGCGTAAGTGATCCAACAACAAGGAAGGCGTTACTAGTGTGTGAAAATGGATATTATGCAGTAAATGAAGCATTTGTAGAAGGGATCCGGTGGTTCTCACAAAAATATTACAAGGAAATGTTGAATGTTGAGAGGAGAGCACCAAGCGCACAAGCAAGTTGTACTTCGATATTCACCACTACACCACCACCCAAACAAAACCCACTTTTTCAAATTAATAGAGAGATGAGAATTCTCATTGCTATGGCTATAGTATCAGGCTCTAGCATTGGTTGA ATGACTTCTTCAACATATTTTTTGTCATCTCAATTGTGGCTTACCTTGTTCATCGTTTTGATCACCGTTTTTCAGTTGGCTATAGCAGCTGATAGTGGAACTGAAGATAAAATCAAGAGAATATGTCGTCAGATGGAAGAGTTTGAGTTTTGCAGCCAAACCTTCCATCAGAATTTGAAAGGTGGTTCAGCAGACTATATAGGACTAACTGAAATAGCAAACAATCAAGTGTATACGAAGGCATCCAGTACACTTGTTTACATTGAACAACTTTTGAGAAGCGTAAGTGATCCAACAACAAGGAAGGCGTTACTAGTGTGTGAAAATGGATATTATGCAGTAAATGAAGCATTTGTAGAAGGGATCCGGTGGTTCTCACAAAAATATTACAAGGAAATGTTGAATGTTGAGAGGAGAGCACCAAGCGCACAAGCAAGTTGTACTTCGATATTCACCACTACACCACCACCCAAACAAAACCCACTTTTTCAAATTAATAGAGAGATGAGAATTCTCATTGCTATGGCTATAGTATCAGGCTCTAGCATTGGTTGA
BLAST of CSPI02G04860 vs. TrEMBL
Match: A0A0A0LGJ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G034680 PE=4 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 7.7e-96 Identity = 182/183 (99.45%), Postives = 182/183 (99.45%), Query Frame = 1
BLAST of CSPI02G04860 vs. TrEMBL
Match: A0A0A0LM47_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G034690 PE=4 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 3.0e-79 Identity = 149/156 (95.51%), Postives = 153/156 (98.08%), Query Frame = 1
BLAST of CSPI02G04860 vs. TrEMBL
Match: A0A067KYT8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15714 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 5.5e-33 Identity = 77/178 (43.26%), Postives = 116/178 (65.17%), Query Frame = 1
BLAST of CSPI02G04860 vs. TrEMBL
Match: B9RED7_RICCO (Enzyme inhibitor, putative OS=Ricinus communis GN=RCOM_1620790 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 2.1e-32 Identity = 79/175 (45.14%), Postives = 110/175 (62.86%), Query Frame = 1
BLAST of CSPI02G04860 vs. TrEMBL
Match: B9N451_POPTR (Invertase/pectin methylesterase inhibitor family protein OS=Populus trichocarpa GN=POPTR_0005s00890g PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.3e-31 Identity = 78/168 (46.43%), Postives = 108/168 (64.29%), Query Frame = 1
BLAST of CSPI02G04860 vs. TAIR10
Match: AT1G09360.1 (AT1G09360.1 Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 73.2 bits (178), Expect = 1.9e-13 Identity = 50/170 (29.41%), Postives = 74/170 (43.53%), Query Frame = 1
BLAST of CSPI02G04860 vs. TAIR10
Match: AT3G49330.1 (AT3G49330.1 Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 50.8 bits (120), Expect = 1.0e-06 Identity = 42/171 (24.56%), Postives = 73/171 (42.69%), Query Frame = 1
BLAST of CSPI02G04860 vs. NCBI nr
Match: gi|700205896|gb|KGN61015.1| (hypothetical protein Csa_2G034680 [Cucumis sativus]) HSP 1 Score: 357.8 bits (917), Expect = 1.1e-95 Identity = 182/183 (99.45%), Postives = 182/183 (99.45%), Query Frame = 1
BLAST of CSPI02G04860 vs. NCBI nr
Match: gi|778674028|ref|XP_004144806.2| (PREDICTED: uncharacterized protein LOC101217914 [Cucumis sativus]) HSP 1 Score: 302.8 bits (774), Expect = 4.2e-79 Identity = 149/156 (95.51%), Postives = 153/156 (98.08%), Query Frame = 1
BLAST of CSPI02G04860 vs. NCBI nr
Match: gi|659071546|ref|XP_008460526.1| (PREDICTED: uncharacterized protein LOC103499324 [Cucumis melo]) HSP 1 Score: 281.2 bits (718), Expect = 1.3e-72 Identity = 137/156 (87.82%), Postives = 145/156 (92.95%), Query Frame = 1
BLAST of CSPI02G04860 vs. NCBI nr
Match: gi|659071548|ref|XP_008460537.1| (PREDICTED: uncharacterized protein LOC103499331 [Cucumis melo]) HSP 1 Score: 252.3 bits (643), Expect = 6.6e-64 Identity = 125/157 (79.62%), Postives = 135/157 (85.99%), Query Frame = 1
BLAST of CSPI02G04860 vs. NCBI nr
Match: gi|659071542|ref|XP_008460509.1| (PREDICTED: uncharacterized protein LOC103499305 [Cucumis melo]) HSP 1 Score: 245.4 bits (625), Expect = 8.0e-62 Identity = 123/157 (78.34%), Postives = 135/157 (85.99%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|