CSPI01G33670 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G33670
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 28631147 .. 28631389 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAGGAGGTTTGCAGGGAGTTGGCTTCATCCCATGTTTGCCGGAAATCCCATCCCCAAGTCTCAAAGTTTCCAGAGAAGCACAAAACGGCTATCAGTGACGATGAAGAAGTCGAAAGATCAAATTTAATGAAGACTGAGAAAGTTTCGGTCAAGCCAAAACTGTTGCCCAATAAGAAATCAAAGGAAGTTGAGAAGGTCTTCAAGGAGGACAGAGAAAGGAGTAGACAATATAATTAG

mRNA sequence

ATGGAAAAGGAGGTTTGCAGGGAGTTGGCTTCATCCCATGTTTGCCGGAAATCCCATCCCCAAGTCTCAAAGTTTCCAGAGAAGCACAAAACGGCTATCAGTGACGATGAAGAAGTCGAAAGATCAAATTTAATGAAGACTGAGAAAGTTTCGGTCAAGCCAAAACTGTTGCCCAATAAGAAATCAAAGGAAGTTGAGAAGGTCTTCAAGGAGGACAGAGAAAGGAGTAGACAATATAATTAG

Coding sequence (CDS)

ATGGAAAAGGAGGTTTGCAGGGAGTTGGCTTCATCCCATGTTTGCCGGAAATCCCATCCCCAAGTCTCAAAGTTTCCAGAGAAGCACAAAACGGCTATCAGTGACGATGAAGAAGTCGAAAGATCAAATTTAATGAAGACTGAGAAAGTTTCGGTCAAGCCAAAACTGTTGCCCAATAAGAAATCAAAGGAAGTTGAGAAGGTCTTCAAGGAGGACAGAGAAAGGAGTAGACAATATAATTAG
Homology
[Close]
BLAST of CSPI01G33670 vs. TrEMBL
Match: A0A0A0M3I8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690330 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 9.7e-35
Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 1 

Query: 1   MEKEVCRELASSHVCRKSHPQVSKFPEKHKTAISDDEEVERSNLMKTEKVSVKPKLLPNK 60
           MEKEVCRELASSHVCRKSHPQVSKFPEKHKTAISDDEE+ERSNLMKTEKVSVKPKLLPNK
Sbjct: 87  MEKEVCRELASSHVCRKSHPQVSKFPEKHKTAISDDEEIERSNLMKTEKVSVKPKLLPNK 146

Query: 61  KSKEVEKVFKEDRERSRQYN 81
           KSKEVEKVFKEDRERSRQYN
Sbjct: 147 KSKEVEKVFKEDRERSRQYN 166

[Close]
BLAST of CSPI01G33670 vs. NCBI nr
Match: gi|700211700|gb|KGN66796.1| (hypothetical protein Csa_1G690330 [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 1.4e-34
Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 1 

Query: 1   MEKEVCRELASSHVCRKSHPQVSKFPEKHKTAISDDEEVERSNLMKTEKVSVKPKLLPNK 60
           MEKEVCRELASSHVCRKSHPQVSKFPEKHKTAISDDEE+ERSNLMKTEKVSVKPKLLPNK
Sbjct: 87  MEKEVCRELASSHVCRKSHPQVSKFPEKHKTAISDDEEIERSNLMKTEKVSVKPKLLPNK 146

Query: 61  KSKEVEKVFKEDRERSRQYN 81
           KSKEVEKVFKEDRERSRQYN
Sbjct: 147 KSKEVEKVFKEDRERSRQYN 166

The following BLAST results are available for this feature:
BLAST of CSPI01G33670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G33670 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M3I8_CUCSA9.7e-3598.75Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690330 PE=4 SV=1[more]
BLAST of CSPI01G33670 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI01G33670 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211700|gb|KGN66796.1|1.4e-3498.75hypothetical protein Csa_1G690330 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G33670.1CSPI01G33670.1mRNA