CSPI01G32070 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G32070
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Vacuolar protein sorting-associated protein, putative
Location	Chr1 : 26837382 .. 26846721 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTATTCTAATTGGGACTTGGATAATCTGAGGATTTTCTGGAAGTCTGCATCTTCAACATTGAACCTCCCCTTTTCAAACCAGATACAGTAGAAAGAGTCCACGATTTTGCAACTTTTGACTTCCATTTCCGAAAAAGATGGATCCGTGACTCCCCGGACTTGGATAATTATGACAAAGAAATATGTTCTCTGTACTTTTTGAGAAAAGATAATGATCTTATGTTATTAAACAAAGCTAAAGGTATATATATATATATAGGCCACACAGAAACCCTAATCTACGAGATAAGGAATTACAATAAAGGACGACTATACGTAATTATATTATACACATATTATAACAAGCTTAAACAGGACAATTGTACTAACAGGAAACTTGAGAACTCTTCAAACTTCTTGGAATGAAAATACCATGAAGAAGACTTGAGCCGCTTCTAAAACCTTTTATTAAGACAAATTGTTCTAAATTCTCAAAATATCCGTTGAAGGAAGGGGAAGAATTAGGCTCCCTTGTTTTTTCACCTCTCGAAGCAGTTGTCTCACAGCTTTTTCCAGTTCATGCTAAATGTTACTCTCGTAAGTGACTTTCAGCTCCAACCTCTAAAATTAATGACTTTAATTCTGATGTCTTGGAAGAAAGTTGTATTTGTGGACGAGTTCCAGTTTTGATTCTAAAAATCTGAGTTTAACTCTTCACGACTTTGCCACCTCAAGCCATCTGTTCCTCTATTATTTCACTGTTGAATGCAAAATGTAACCTTATCATGGAAGTGCACAATCATTTGATTTCAATGAAAAGTGTCGTTTTCTTTCTAAAAAAGGAAAAAAAACATAGAGAAACAAAATGTATACCATTGTTTTGTGTCCTTGTTGAGAAATTGGCAGGATCTCGTATCCTTATCATGTAGTATCTTTGTCCCATGTCTTTGTCAATGCTTATTTGTGAAGTTATGGCCCACCATCTTTTTCATTTTGTTTACATTCCTAAGTCTTCTTTGTTAGACTGTTATTGACGTTTTTTTCTCATCTAACAGACTCTATCGTCGGAGGTATGTCGAGTTTTACAAGAAAAAGTTGGAATTTCTGCACAATGATCAGGTAATTTGATCCTTCTCGTTTCCTTAGGGTAGACTTTGAAATTGAGCAAAAAAGTTGGACTAGTGGTTTAGTGTGACAACTAACACAAAATGTTCCACCTTTTGTTGAAACAGGAAACATTTCTTATTCTAGTTGTTCTTGTGTGTTTTTTTTAACTAGATACAAACTCTTTTCATTGATGTTTTTAAGGATAAAATTCTCTAATAGGCCTTAGGGAAAGTTTAAAAACTAAGAAAGGAAGTTACAAGCCTTTATTTATTTATTTTAAACGGAAACAAGACTATTTATTGATGTAATGAACGAGTTTAAAGCTTGGAGTACATGAGAGGAAACAAAATGAAAACTTCAAACTTGCCATTACAAGGCTAGAATCAAATTTATCATAAAGACTGAATTACATTATTAAGTCTAAAGCTCAGGATGCAATGTGCATTTTGTGCGAACTATTCCCGGTAGCAATGCCAACAAATTCCACACCAGACATCAAGAATCAGATTGTGAATCAATCGTGAGCGTGACTAGTGAAGAAATTGATCGTTCAGAAACAGGGGATGCACAAGAAAAAGCAGAAATTTTGGAATAGCTTCGGAAATGACATCAGTGATTTGTTGATCGAAGACAATATCACAAAATCGGGCACCTAAAGATTCACTCATTCACCTCATAAGCTGTAGCACTTGGTGTACAGAAATTTTGGAGTGAATGTGGAAGATCAGGAAGTCTGTACATTAGCCGCAAGGTTTAGTTGCAAAGTTGGCAAACTGCCATTCTTGTTTTTTGGATTACGGTTACCCAAAAGAGTATCTTTTTGGCAACCTATCATAGAAAAACTACAAATCAAGCCTTACAAATAGAGAAGATACAACTTATCAAGAAGGGGAAGAGCAACAGTTTGTATGTCTGTCCTTTCTAATCTACCCACTTACGATATGGCCCGTTTTAAATGCCTGAAGGTATGGAAACTCAATAGTGTGCATGATGAGAAACTTCTTTTGGGAGGGGTGGGCACAATGGAGGCAAAATAAATCATTTAATTAAATGGGAGGCAATATCTTGGAATCAAAAGGATGGAGGATTGGGCCTTGGCAGCTTTTGCCAAAATAATATAATTTACTGTGTATTTAACAATGAGAGAAGAGTTTTCTTAAATAGAAGAGCAACCCATTATAAAGAAGAAAAAAATAAATTTGGAAAATATAATACAACCAATACAATAAAATATAATACAAGAAAGGAAATACTCAACACTCTCCCTGAAGCTGTTTTGAAGATATCCGTCGTTGCTAGCTTGTTAATCAATTTGTTGAATTGCCACTTTGGAAGGGCTTTAGTTAACACATCTGCAATTTGTTTTGTTGTCGGAAGATAGGATATGCATATTACTCCTGCATCAATCTTTCCTTTAAATAGTGCTTATCAACTTCATTCTGTTTCGTCCTGTCATGAAGGACTGGATTGCAATATCTTTTCCTTTAATAACTCTATTAGTAATGAAGATTCTTGCCCAATTAATTCGGATGACAACTCAGTATTTTTTTTGGAAAAAACGTTTTTGAACGTTTCAGAACCAGATTCTTAACATTCTATCAGTGCAGGGGTCATTTTTCTCCTTCCAACCATTTCAAGCGTGTCAAAGGTAGTAAATATTCTCATGTCCCAAAAATACTCAAGCAGTGTATCCCCAAGCAAACCTCCTTCAACAATGTGTGGACTGCCCTTCTAAAGTCTCAATTAAATGGAGTCTGTGACCTTAAAATCTCCCTTTGGACTCTTTTCGGAACCATTCCATCAAGCACTCTGTTTCTGCCAATAACTCGGATCTTCTGGAAGTGTACAGCTCCAAAGTTCAGGTACCTGAATGCATCATTAGGCCAGTAAACCTTGTTTCTTCACCAAAGTGTCTCAATTTTTCTAAATCCTCCATCTCTAACTCAAAGGCATCGTTTCTACGAGGTTCCTCCTGCAAAGATGATGTTTCTCTCAAGAACCAGCTTCAAATTTCCTCACTTGTCAGTGTTAGTAGTGAAGATGCAGCCGAAACCCCAAACGAGATTGACCTTAAATTAGACTAAAAAATTGAAGGGATGAACCTTAATGTGTTGTTTAATGAGGAGAGTTTCACTTGTTTCTTTATAAAGAAATAGATAGAACTTTATTATATGAATACACTTGTTTCTTTATAAAGAAATAGATAGAACTTTAATACTTCTGTTAGCAAGTTGTGACTAATTGACATCTATGCTCCAACTTGAGGGGGAGTGTTGGAAATAGTGAGCTTGTTGATTTTTATTGTCAACTCAATAGTATTTTTGTAATTTTTTGTATCCTAGTTTATTTCCTTATTTGTTAGGGCATATTGTAGCCTATATATTTTTCCCCCTTGTATTTTTTGAATCATTAAAAAATAATAAGAAAGACTTCTATTGTGGTTTTTTCTCCCTGTAGTAGGGTTTTCTACCTATATCTTATGTTTTGTCTTCTTCCTTTCCAATACTTCAGAGGCTCATTTTGAACTTCTTCTCATTTTTTTGGGTTGGTTTTGAGTTGTAATGTTTTCTTGGGTTGTTGAGTTCTTTTGCTATTATTGGATTGGTTCAGCAGCTAGATAATTTGGTTAGATAAGTTTTGATAAAGTGGACTAACATATAGACAACCTTCTAATCTTTTGTTTATTTTTATTTATGGTACATTGAGCATTAGTCTCATTTCACTTACTTAATGAATGAGGTTTGTTTCCGTTTAAAAGAATAAGATCCCCATTTAAGGGGGCATTTTAAGCCAATTAAAATTAACAGTTCAACCCAACTTCTTCAAAATTCTAGAGTTTCTACACACTTTCTCCATGCTAGCAAGTGTCACCCTCTAGATTCTGGACTTGACCCATCATCTACCTTTTTAAAAAATGTTTAAAACCCACTATGCTACCTGAATCTTCTTTCTAACTTCATCAACATCGGTGACTTCAATTTCAAGACCCACAACTGCCGACGACTTATCTGACTTTTCTTACTTTTCTTTTCTTTTCTCATTTATGTCTTTTTCCTCATTTTTTTTATCTTTCTTTTTGTTCTTCTTCCATTTATTATGTGACTTCTCCTACTTTTGTAAATAGATGTGCACATATTCACATTTTGTTATTTTATGTACACATTTATTTTTGTAAAAAACTAGAAAAAAATGTATTGTCCTACTTTTTTTGGAAGTCAACATGTTGCCATGTTGGCGTCGATGTCGCGACACTTGTCAGTATTTATGTTTCTTCATAACAAGTTTGTTTGTTGGTAGCTGGGGATTTCTTTTTTTCTTTTTCTCTTTTGTATATCCTTCTGTATCTCTCATTTTTTTCAATGAAAATTCCATTTTTAACACAAAAAAGGAAAGAAGAAAGAAATTTAGAAAGTAGTCTGTCAAAAACCAAGCCAAGGAGGGAGAAACAAACTTGTATTGTTGATAATTTGGTTGGATATATTGTTTCCTTTTAAAAAAAAATTGATAGTACGTTCAACCAGACTGTTAACTTTTATTTGCTTTTTATTGAGGAGAATCTTGTTGTGTTGTACAACTTTTGTTTGTTTACTGTTTTGATTTTTATACTGATATTTCCGTGCTTTCTATTTCTAGTCAATTGATGATCATATTCTCAAAGAATTGGAGGTATTGGAGAAAGAGTCAGATATAGAAGATATTTTAAGTTATAGATCGACTGCTGAATGTGAATTACAGGTAAGATGAAATGATGGATCGAGTAAGAAGTAATTCTGATACCCAAATCATGTCTCTATTACTTGTCTATATCAATCTTGTTAGATAAGAGGCACATTTAGGCTACTCTATCTAGGTGGGCCACTTTCCCTGATTTGCACACACAATTGAGACTCTCGCTTCTAATCATAATTGGATGTAGATTATTGATATGGTGTTTGGGTTTTACGGCTTATGTTCTACGTTTACCAGTGTGTTTATTCTTTTCTTCTATTGACATGAAATAACATATGAACCTTATTTTTGTTTCCTTCCTCACTTATAGTACACCTTATGTCTTGCTTCTATTCGAAATAAGTCGTAAATTATTTATTTGGTGTTTGGGCTTCAACTTCCTAATTTCCTTGTTTTATCTTAGTATTTTCAATATGTTGGTTGTATTTTGCTTACCTATGTATTTGCTTTGAATTTGTGTTATTGCCGGTCTAGGTCTAAATATGATGAGTGCTAAGAGGGTATCGACCTAGTTGAGATGTCTGGGTGCACTCGTTGATCCTTAGGGCTTCGGCTTAGTCTCTTCATTGTATTTATCTCATTGTATTGTCTATTCATTTTCTTAATGAAGTGGATTGCTTTCTTTTTTTTAAAAAAAAAAACGTTATATATGTATATATATCTATCTGAAAATCTGTCTAACCCTTCAGTTGGACACACTGCTGAAATAATCATTCTGATTATTTTAGTGAATGGAATGCTTAAAAAATTGGGTACATAATGGAAAGGGACACGGCGTCTCTTCTCCGAAGGGGAGCTGAAGTTTTCCTATTTAAGTCGATGTTGTATTAGAAATCATTACAAAACAGCCGGGGCCTGCGGGGGACTTCAATTGAGTGGCGTGAACTGTCCAAGTTCTCACCAAATAAATAAAGAAAGAAAGAAAGAAAGAATGAAAAGAAGAAGAATCATCTTTGAGACATTTTGTCATTGCACCTTAGTTTTATCACTAAGCCACTGGGCAGGAAGAGCTTCAACCAACCAATACTCTGGTACCTCTGTTTCCACTTCTGTATTTCAAATATCTCACTTTGTACATAAAGTTTCAATAAGTAAAGAGGTGGAATGGTGGTTTTTCATTTCTTTTGTATAAAATAAACCTTGGAGGTGACTATTGAATAGAGGGGTCTTTTTTCTGCACACCATCCAGAGTTTTTATTTTCCATAAACTACTGTCTATAGGAAAAACTCAACTCTTTTAGGGACTGTCCTCAAATAAGATTACGCTGCTCCTTGTCCAAAACCCTTCCTAGCAACTGAAGGTTTTTGTGATGATTGGGGTGTGCTGAATCTGCTGATTGAGGATTTCTTTCTTCATCACATTTTTTCCATAAAAGAGGAAGGTGTTTGTGGTAGACAGTGGACCAGTGGTGTGTTCATATTGTTTTGGAAGCACCCTTGTGTGGACATTATCACCTTGGAGTGTAAATTTCCAAGATTGGGTAGGATCGCACTCAACCCAAATGGGTCTGTTTTAGATCATTGGGACTTGTCAACTAACTCTTGGTCCATCTATTTCAGAAGATTGCTTAATGATGAGGAAATATTAGATTTTCAGGCCTTGTTGAGTCAGATTTCTTCTTCACAGCCAGCCTTCTTTTCGGATCAAAGGTTTTGGTCCCTTGAAAACTCAGGTTCCTTCTCGGTTAAATCACTGGTTAAGCATCTTTCGACATCTTCTCCTTTGGAAAGTTCTTTGTACAAAAGGCTTTGGAAATCTAACAGTCCAAGAAGGATAAATATAAACATATGGATTATGCTGTGCGGAAATTTAAACTGTGCCTCACTACTTCAAAGAAAGCTTTCCTCCTATGCACTCTCACCTCATGCCTGCCCCCTTTGTGTTAATAACATGGAAAATATCCAGCACCTTTTACTTGATTGTGTCTTTGCATCTAAATGTTGGTTCTATCTTCTCCAAGCATTCAATTTTTGTTGGGTTTTTAATCATGTTTTTAAGAACAATTTGCTTCAAATTCTTGCCGGACCAGACTTGAAGAAGAAGACAGCTGAACTATTGTGGGCAAACGCAGTAAAAGCACTTTTAGCTGAAATTTGGTTTGAAAGAAACCAAAGAGTATTCCATGATAAATCATCGACTTGGTTGGAACGCTACGACTTTGCTGTTTTGAATGCATCTTCGTGGTGCTCATTTACTAAATATTTTCAGGATTACTCTTCGCAGGTGATTGTTCTAAATTGGCCCGTCTTTATAGCCTCCCCGTCCTGAAGTTCTGGAGTATCTTGCCTTCCGAATGAGCCTTTTGCTCCAATCAGTTTTTGCTCAATCAAGGACTATTATTTTGTTTTGTATTCGGCTTGCTGCCTTGCTTATGTTTATGTTTTGGATAGTTTGTTTGGCCTTGTATTGTGGCCTTTTAAACTCTTGTTTGGCCTTGTTTTATGTCCTTTGTTTGGCTCTTGTATTGCTTTTAGAAACATGGTATTTAGGTTTTTTTTTTTTTTGCTTTTTGGATGTGATGAGGGCGGTACGGAGGTGTCAACCTAGTTGAGATGCCGGGGTGCGCCTGCTGATCATCCCCTCCTATTGCTCTTGTATAACCCTTATGTACATTGAGCTTTGTCTCTCTTTTCAATATTAATAATAGTGAGACTCGTATCCTTTTCAAAAAAAGATAGACAGTGGTGTGTGCTGTTCTGTGGGGTCTTTGCAGGGAAAGTAAACAAAGTCTGTAGATGGCCTCCGACATCTTTAGGCTCTTGTGTCCCTTTGGGCTTCAGGAGTTAACTGTTTTGTTGGTCTTGTTAGGAATTTAGTTTGACTGGAGGCCCTTTCTTTAGGTTGTTTTTTACGTTCGTAGACAGTGTATAGCTTTTCTTTACATGTTCTCTTTCTTTTGTTGTTTTGTTGTTTTTTTTTAATTAATGTTAGGCTTTTCACTAAATTTTTCTGTGGAGTTTACATTACCTTCTTTTAGCTATATAAGCTCTACTTTTTGAAGCTATATTTGTTTCGCTAACTATCCTGATAAGCTATTTATTTTATTTTATTTTGAAGTTTATTTCCAGTTTAGTCTTTGATTTTTAATGGCTGACCATCTCTTTTTGCTTATTATGTATGAATTGGGTTCTCTAATATTTTGAGGAAGATTTCTATCGTTGTAAAATATTAAGTGTTGTTATTCTTTCTAAATCTCACTTCCCTTTTTTGAATTTGTTGTAAATGGATCAACTAGCATCTATTCGGCAGTTTGAAACCAGAAATGGCAATGACTGGTGCACAAACAACTGTTGAGAAGTCACAAGTTGATGATCGTGCAGTGGGAAAACCTCGAGGATGGCTTAACTGGCTATCCCTTGGTATGTTAGGTGCTGGGGGTACTGAAGATTCAAGTCAATTTTCTGGTGTCATTTCAGATGATGTTGTAAAGGTATTTGTCTTGTTTCACCTTTTCTATGATGAACAAAACACTTACTTTCATTTTTATTTGTAGGATATATATAAGGCTACCAAATTCCACCCTTCGGTTTTTTCTAATGTCAGTGCGGCCGATGAAGGAAGGATCTGCTTTTGTGCAATCGAATTTGACATTCATCACATCTCAGCAACTTTGATGAGCAAGTATTAATTCTGATCTTGAACCTCAATCAATGAGTTGTTTGTGTTTATATGCACAAGACTAGTGTTTGTGCTTGAACAAACTTTCAACTTTATGATTTTCTTTTATTCTTATTTTTATTGTTACAAAATCGACATTCGTATCCAACTTGCTAACTCCGTGTTACGTTACACTATTTACTAACGAATGAATCAATATCACATCCAAATAAAAGGGTTCTTAGGACATGAGAACATGGATAAGAAAGGCTTAAAAGAACTTAAAGGTGCACCTTCCTTTTCTGTGGCTTAATTATAAGAATTCCAAAGTTAAGCATGCTTAGCATAGAGTAACTCTATGTTGGATAACCTTTTGGGGATTTTTCGTGAATGTTTCTGAGTGAGAAAAGAACATGTTGAAAAGGACCCATGCTGGTCCATGGGACAATTTTCACACTTAGAAACATTCAAGACAAACATGGATGGTGTTGCTAGGTCGTAGGGGATGTAGGAGAATGCTGGGGCCATTAGTTGCCAACTCTGGATTCCGAATCCTAGGCCTAGGCTATGACAAATAGAGTCACAAAATTATTAAATTTCAGGTACATGACTGCATAAGTTAGATCAATCTCTTGATGAAAGGCATGTTCCTATTGACGCAATGGATGAGTTGCATGAAATTCATGCCCCTGTTTAAGTTTGGTTGAAAGGTTGATTAAAATGATTATTATTATTTCGATTGGATCTGCAGATTTTTTTCCGTCTACCATACCATTAAAAAATGTAATTATTCTTTTCTCAGGAAGTACGGTCAAGAAATTGCAAAGATGATATTCATCAAGACGATGGTGGAATGTAAAATTTGGGTGGAATCTGCAACCATCAATATAGTAGTCAATTCTATCGAGATGCTCAATCCACT

mRNA sequence

ATGAGCTATTCTAATTGGGACTTGGATAATCTGAGGATTTTCTGGAAGTCTGCATCTTCAACATTGAACCTCCCCTTTTCAAACCAGATACAACTCTATCGTCGGAGGTATGTCGAGTTTTACAAGAAAAAGTTGGAATTTCTGCACAATGATCAGTCAATTGATGATCATATTCTCAAAGAATTGGAGGTATTGGAGAAAGAGTCAGATATAGAAGATATTTTAAGTTATAGATCGACTGCTGAATGTGAATTACAGCATCTATTCGGCAGTTTGAAACCAGAAATGGCAATGACTGGTGCACAAACAACTGTTGAGAAGTCACAAGTTGATGATCGTGCAGTGGGAAAACCTCGAGGATGGCTTAACTGGCTATCCCTTGGTATGTTAGGTGCTGGGGGTACTGAAGATTCAAGTCAATTTTCTGGTGTCATTTCAGATGATGTTGTAAAGGATATATATAAGGCTACCAAATTCCACCCTTCGGTTTTTTCTAATGTCAGTGCGGCCGATGAAGGAAGGATCTGCTTTTGTGCAATCGAATTTGACATTCATCACATCTCAGCAACTTTGATGAGCAAGCATGTTCCTATTGACGCAATGGATGAGTTGCATGAAATTCATGCCCCTGAAGTACGGTCAAGAAATTGCAAAGATGATATTCATCAAGACGATGGTGGAATGTAA

Coding sequence (CDS)

ATGAGCTATTCTAATTGGGACTTGGATAATCTGAGGATTTTCTGGAAGTCTGCATCTTCAACATTGAACCTCCCCTTTTCAAACCAGATACAACTCTATCGTCGGAGGTATGTCGAGTTTTACAAGAAAAAGTTGGAATTTCTGCACAATGATCAGTCAATTGATGATCATATTCTCAAAGAATTGGAGGTATTGGAGAAAGAGTCAGATATAGAAGATATTTTAAGTTATAGATCGACTGCTGAATGTGAATTACAGCATCTATTCGGCAGTTTGAAACCAGAAATGGCAATGACTGGTGCACAAACAACTGTTGAGAAGTCACAAGTTGATGATCGTGCAGTGGGAAAACCTCGAGGATGGCTTAACTGGCTATCCCTTGGTATGTTAGGTGCTGGGGGTACTGAAGATTCAAGTCAATTTTCTGGTGTCATTTCAGATGATGTTGTAAAGGATATATATAAGGCTACCAAATTCCACCCTTCGGTTTTTTCTAATGTCAGTGCGGCCGATGAAGGAAGGATCTGCTTTTGTGCAATCGAATTTGACATTCATCACATCTCAGCAACTTTGATGAGCAAGCATGTTCCTATTGACGCAATGGATGAGTTGCATGAAATTCATGCCCCTGAAGTACGGTCAAGAAATTGCAAAGATGATATTCATCAAGACGATGGTGGAATGTAA

Homology

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BLAST of CSPI01G32070 vs. TrEMBL
Match: A0A0A0M027_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G652810 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 6.2e-87
Identity = 163/165 (98.79%), Postives = 164/165 (99.39%), Query Frame = 1


Query: 30  IQLYRRRYVEFYKKKLEFLHNDQSIDDHILKELEVLEKESDIEDILSYRSTAECELQHLF 89
           + LYRRRYVEFYKKKLEFLHNDQSIDDHILKELEVLEKESDIEDILSYRSTAECELQHLF
Sbjct: 3   LSLYRRRYVEFYKKKLEFLHNDQSIDDHILKELEVLEKESDIEDILSYRSTAECELQHLF 62

Query: 90  GSLKPEMAMTGAQTTVEKSQVDDRAVGKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDV 149
           GSLKPEMAMTGAQTTVEKSQVDDRAVGKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDV
Sbjct: 63  GSLKPEMAMTGAQTTVEKSQVDDRAVGKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDV 122

Query: 150 VKDIYKATKFHPSVFSNVSAADEGRICFCAIEFDIHHISATLMSK 195
           VKDIYKATKFHPSVFSNVSAADEGRICFCAIEFDIHHISATLMSK
Sbjct: 123 VKDIYKATKFHPSVFSNVSAADEGRICFCAIEFDIHHISATLMSK 167

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BLAST of CSPI01G32070 vs. TrEMBL
Match: R0GSB5_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10000020mg PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.2e-42
Identity = 96/172 (55.81%), Postives = 118/172 (68.60%), Query Frame = 1


Query: 26  FSNQIQLYRRRYVEFYKKKLEFLHNDQSIDDHILKELEVLEKESDIEDILSYRSTAECEL 85
           F  Q    RRRY+ FYK KL+FL  +QSID+ IL  LE +EK+SDI+DILSYRS AE ++
Sbjct: 350 FLEQRMRMRRRYINFYKIKLDFLRREQSIDETILLGLEEVEKKSDIDDILSYRSVAEGDM 409

Query: 86  QHLFGSLKPEMAMTGA------QTTVEKSQVDDRAVGKPRGWLNWLSLGMLGAGGTEDSS 145
           Q     +      TGA      Q+  EK Q DD    K RGWLNWLS GMLGAGGTEDSS
Sbjct: 410 QEACSDVIVNTGATGATGSVKEQSASEKEQSDDPISNKSRGWLNWLSRGMLGAGGTEDSS 469

Query: 146 QFSGVISDDVVKDIYKATKFHPSVFSNVSAADEGRICFCAIEFDIHHISATL 192
           QFSGV+SD+VVKDI+KATKFHP   S+ + +  G+IC C++  ++H ISATL
Sbjct: 470 QFSGVVSDEVVKDIHKATKFHPLSLSSKNTSATGKICTCSVRLNVHKISATL 521

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BLAST of CSPI01G32070 vs. TrEMBL
Match: B9RXC4_RICCO (Vacuolar protein sorting-associated protein, putative OS=Ricinus communis GN=RCOM_0902510 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.4e-41
Identity = 90/163 (55.21%), Postives = 120/163 (73.62%), Query Frame = 1


Query: 34  RRRYVEFYKKKLEFLHNDQSIDDHILKELEVLEKESDIEDILSYRSTAECELQHLF-GSL 93
           RR+Y+  YK KL+FL  +Q+ID+ I +ELE +EKE DI+DIL+YRS AE ELQ +   S 
Sbjct: 357 RRKYINLYKIKLDFLQQEQAIDEFIFRELEQMEKEFDIDDILNYRSAAERELQEVLPDSS 416

Query: 94  KPEMAMTGAQTTVEKSQVDDRAVGKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDVVKD 153
              M + G   +++KS+ D+R +G+ RGWLNWLS GMLGAGGT+DS+QFSGV+SD+VVKD
Sbjct: 417 ASNMGVNGIDISLKKSRNDERLLGRSRGWLNWLSRGMLGAGGTDDSTQFSGVVSDEVVKD 476

Query: 154 IYKATKFHPSVFSNVSAADEGRICFCAIEFDIHHISATLMSKH 196
           IY+ATKFHPSVFS+       ++  CAI+  I  I+A L SK+
Sbjct: 477 IYEATKFHPSVFSSGVVDATDKMFICAIKLSIGQITAALYSKY 519

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BLAST of CSPI01G32070 vs. TrEMBL
Match: A0A061DJI1_THECC (Vacuolar protein sorting-associated protein 13A, putative OS=Theobroma cacao GN=TCM_001701 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.0e-41
Identity = 97/160 (60.62%), Postives = 116/160 (72.50%), Query Frame = 1


Query: 34  RRRYVEFYKKKLEFLHNDQSIDDHILKELEVLEKESDIEDILSYRSTAECELQHLFGSLK 93
           RR+YV  YK KLEFL  DQ ID+ I++ELE +EKESDI+DILSYRS AE ELQ +    K
Sbjct: 352 RRKYVNLYKTKLEFLQQDQPIDESIIRELEQMEKESDIDDILSYRSAAEHELQEVLS--K 411

Query: 94  PEMAMTGAQTTVEKSQVDDRAVGKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDVVKDI 153
           P  A      +VEKS+ D ++ GK RGWLNWLS GMLGAGGT+DSSQFSGV+SD+ V+DI
Sbjct: 412 PSTA----NISVEKSRQDGQSSGKSRGWLNWLSRGMLGAGGTDDSSQFSGVVSDEDVQDI 471

Query: 154 YKATKFHPSVFSNVSAADEGRICFCAIEFDIHHISATLMS 194
           Y+ATKF+P VFS V A    ++    IEF I  ISATL S
Sbjct: 472 YEATKFYPPVFSAVDADTNEKMYTRVIEFSIDEISATLWS 505

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BLAST of CSPI01G32070 vs. TrEMBL
Match: A0A0D2V0U0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G024100 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.6e-40
Identity = 93/163 (57.06%), Postives = 120/163 (73.62%), Query Frame = 1


Query: 34  RRRYVEFYKKKLEFLHNDQSIDDHILKELEVLEKESDIEDILSYRSTAECELQHLFGSLK 93
           RR+YV  YK KLE L  DQ ID+ ++++LE +EKESDI+DILSYRS AE ELQ +   LK
Sbjct: 353 RRKYVNLYKTKLELLRQDQPIDESLIRDLEQMEKESDIDDILSYRSAAEHELQEVL--LK 412

Query: 94  PEMAMTGAQTTVEKSQVDDRAVGKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDVVKDI 153
              A+     +VEKS++D ++ GK RGWLNWLS GMLGAGGT+DSSQFSGV+SD+ V+DI
Sbjct: 413 SSTAIF----SVEKSRLDGQSSGKSRGWLNWLSRGMLGAGGTDDSSQFSGVVSDEDVQDI 472

Query: 154 YKATKFHPSVFSNVSAADEGRICFCAIEFDIHHISATLMSKHV 197
           Y+ATKF+P V S + A    +I   AIEF I+ ISAT+ S ++
Sbjct: 473 YEATKFYPPVLSGIDADTNDKIYSRAIEFSINEISATIWSMNL 509

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BLAST of CSPI01G32070 vs. TAIR10
Match: AT5G24740.1 (AT5G24740.1 Protein of unknown function (DUF1162))

HSP 1 Score: 149.8 bits (377), Expect = 2.0e-36
Identity = 82/145 (56.55%), Postives = 97/145 (66.90%), Query Frame = 1


Query: 53  SIDDHILKELEVLEKESDIEDILSYRSTAECELQHLFGSLKPEMAMTGA------QTTVE 112
           SID  I   LE LEK+SDI+DILSYRS AE E+Q     L   M  TGA      Q+  E
Sbjct: 342 SIDKSIRLGLEELEKKSDIDDILSYRSAAEGEMQEACSELTVNMGATGATRSEKEQSAPE 401

Query: 113 KSQVDDRAVGKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDVVKDIYKATKFHPSVFSN 172
           K   DD  + K RGWLNWLS GMLGAGGTEDSSQFSGV+SD+VVKDI+KATKF+P   S 
Sbjct: 402 KEPSDDPTLNKSRGWLNWLSRGMLGAGGTEDSSQFSGVVSDEVVKDIHKATKFYPLSSSP 461

Query: 173 VSAADEGRICFCAIEFDIHHISATL 192
            + +  G+IC C+I  ++   SATL
Sbjct: 462 RNTSATGKICTCSIRLNVRKFSATL 486

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BLAST of CSPI01G32070 vs. NCBI nr
Match: gi|700211553|gb|KGN66649.1| (hypothetical protein Csa_1G652810 [Cucumis sativus])

HSP 1 Score: 328.6 bits (841), Expect = 8.9e-87
Identity = 163/165 (98.79%), Postives = 164/165 (99.39%), Query Frame = 1


Query: 30  IQLYRRRYVEFYKKKLEFLHNDQSIDDHILKELEVLEKESDIEDILSYRSTAECELQHLF 89
           + LYRRRYVEFYKKKLEFLHNDQSIDDHILKELEVLEKESDIEDILSYRSTAECELQHLF
Sbjct: 3   LSLYRRRYVEFYKKKLEFLHNDQSIDDHILKELEVLEKESDIEDILSYRSTAECELQHLF 62

Query: 90  GSLKPEMAMTGAQTTVEKSQVDDRAVGKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDV 149
           GSLKPEMAMTGAQTTVEKSQVDDRAVGKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDV
Sbjct: 63  GSLKPEMAMTGAQTTVEKSQVDDRAVGKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDV 122

Query: 150 VKDIYKATKFHPSVFSNVSAADEGRICFCAIEFDIHHISATLMSK 195
           VKDIYKATKFHPSVFSNVSAADEGRICFCAIEFDIHHISATLMSK
Sbjct: 123 VKDIYKATKFHPSVFSNVSAADEGRICFCAIEFDIHHISATLMSK 167

[Close]

BLAST of CSPI01G32070 vs. NCBI nr
Match: gi|778664064|ref|XP_011660209.1| (PREDICTED: uncharacterized protein LOC101204937 isoform X1 [Cucumis sativus])

HSP 1 Score: 328.2 bits (840), Expect = 1.2e-86
Identity = 164/169 (97.04%), Postives = 165/169 (97.63%), Query Frame = 1


Query: 26  FSNQIQLYRRRYVEFYKKKLEFLHNDQSIDDHILKELEVLEKESDIEDILSYRSTAECEL 85
           +  Q  LYRRRYVEFYKKKLEFLHNDQSIDDHILKELEVLEKESDIEDILSYRSTAECEL
Sbjct: 343 YLGQRLLYRRRYVEFYKKKLEFLHNDQSIDDHILKELEVLEKESDIEDILSYRSTAECEL 402

Query: 86  QHLFGSLKPEMAMTGAQTTVEKSQVDDRAVGKPRGWLNWLSLGMLGAGGTEDSSQFSGVI 145
           QHLFGSLKPEMAMTGAQTTVEKSQVDDRAVGKPRGWLNWLSLGMLGAGGTEDSSQFSGVI
Sbjct: 403 QHLFGSLKPEMAMTGAQTTVEKSQVDDRAVGKPRGWLNWLSLGMLGAGGTEDSSQFSGVI 462

Query: 146 SDDVVKDIYKATKFHPSVFSNVSAADEGRICFCAIEFDIHHISATLMSK 195
           SDDVVKDIYKATKFHPSVFSNVSAADEGRICFCAIEFDIHHISATLMSK
Sbjct: 463 SDDVVKDIYKATKFHPSVFSNVSAADEGRICFCAIEFDIHHISATLMSK 511

[Close]

BLAST of CSPI01G32070 vs. NCBI nr
Match: gi|778664067|ref|XP_011660210.1| (PREDICTED: uncharacterized protein LOC101204937 isoform X2 [Cucumis sativus])

HSP 1 Score: 328.2 bits (840), Expect = 1.2e-86
Identity = 164/169 (97.04%), Postives = 165/169 (97.63%), Query Frame = 1


Query: 26  FSNQIQLYRRRYVEFYKKKLEFLHNDQSIDDHILKELEVLEKESDIEDILSYRSTAECEL 85
           +  Q  LYRRRYVEFYKKKLEFLHNDQSIDDHILKELEVLEKESDIEDILSYRSTAECEL
Sbjct: 343 YLGQRLLYRRRYVEFYKKKLEFLHNDQSIDDHILKELEVLEKESDIEDILSYRSTAECEL 402

Query: 86  QHLFGSLKPEMAMTGAQTTVEKSQVDDRAVGKPRGWLNWLSLGMLGAGGTEDSSQFSGVI 145
           QHLFGSLKPEMAMTGAQTTVEKSQVDDRAVGKPRGWLNWLSLGMLGAGGTEDSSQFSGVI
Sbjct: 403 QHLFGSLKPEMAMTGAQTTVEKSQVDDRAVGKPRGWLNWLSLGMLGAGGTEDSSQFSGVI 462

Query: 146 SDDVVKDIYKATKFHPSVFSNVSAADEGRICFCAIEFDIHHISATLMSK 195
           SDDVVKDIYKATKFHPSVFSNVSAADEGRICFCAIEFDIHHISATLMSK
Sbjct: 463 SDDVVKDIYKATKFHPSVFSNVSAADEGRICFCAIEFDIHHISATLMSK 511

[Close]

BLAST of CSPI01G32070 vs. NCBI nr
Match: gi|659085896|ref|XP_008443663.1| (PREDICTED: putative vacuolar protein sorting-associated protein 13A [Cucumis melo])

HSP 1 Score: 317.4 bits (812), Expect = 2.1e-83
Identity = 158/169 (93.49%), Postives = 161/169 (95.27%), Query Frame = 1


Query: 26  FSNQIQLYRRRYVEFYKKKLEFLHNDQSIDDHILKELEVLEKESDIEDILSYRSTAECEL 85
           +  Q  LYRRRYVEFYKKKLEFLHNDQSIDDHILKELEVLEKESDIEDILSYRSTAECEL
Sbjct: 343 YLGQRLLYRRRYVEFYKKKLEFLHNDQSIDDHILKELEVLEKESDIEDILSYRSTAECEL 402

Query: 86  QHLFGSLKPEMAMTGAQTTVEKSQVDDRAVGKPRGWLNWLSLGMLGAGGTEDSSQFSGVI 145
           QHLFGSL+PEM MTG QTTVEKSQVDDRAVGKPRGWLNWLSLGMLGAGGTEDSSQFSGVI
Sbjct: 403 QHLFGSLRPEMVMTGTQTTVEKSQVDDRAVGKPRGWLNWLSLGMLGAGGTEDSSQFSGVI 462

Query: 146 SDDVVKDIYKATKFHPSVFSNVSAADEGRICFCAIEFDIHHISATLMSK 195
           SDDVVKDIYKAT+FHPSVF NVSAADEGRICFCAIEFDIH ISATLMSK
Sbjct: 463 SDDVVKDIYKATEFHPSVFPNVSAADEGRICFCAIEFDIHQISATLMSK 511

[Close]

BLAST of CSPI01G32070 vs. NCBI nr
Match: gi|731419934|ref|XP_010661192.1| (PREDICTED: putative vacuolar protein sorting-associated protein 13A isoform X2 [Vitis vinifera])

HSP 1 Score: 186.4 bits (472), Expect = 5.5e-44
Identity = 97/187 (51.87%), Postives = 129/187 (68.98%), Query Frame = 1


Query: 34  RRRYVEFYKKKLEFLHNDQSIDDHILKELEVLEKESDIEDILSYRSTAECELQH-LFGSL 93
           RR+YV  YK KL+FL  ++ ID+HIL+ELE +EKES I++IL+YRSTAE ELQ  L  S 
Sbjct: 358 RRKYVNLYKTKLDFLRQEKPIDEHILRELEKIEKESGIDEILNYRSTAESELQDFLLTSS 417

Query: 94  KPEMAMTGAQTTVEKSQVDDRAVGKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDVVKD 153
              M  + A  TVEK   D+R+  + RGWLNWLSLGMLGAGGT+DS +FSGV+SD+V+KD
Sbjct: 418 TSTMGTSSANATVEKLPNDERSSSRSRGWLNWLSLGMLGAGGTDDSGEFSGVVSDEVIKD 477

Query: 154 IYKATKFHPSVFSNVSAADEGRICFCAIEFDIHHISATLMSKHVPIDAMDELHEIHAPEV 213
           IY+ATKFHP + SNV AA    I    ++F IH ISATL    +  +  D +   +   +
Sbjct: 478 IYEATKFHPVLLSNVDAAAADEIYLSTVKFSIHQISATLRRTELDREIADLV--FNGVTI 537

Query: 214 RSRNCKD 220
           +S+ C++
Sbjct: 538 KSKLCEE 542

The following BLAST results are available for this feature:

BLAST of CSPI01G32070 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI01G32070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M027_CUCSA	6.2e-87	98.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G652810 PE=4 SV=1	[more]
R0GSB5_9BRAS	1.2e-42	55.81	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10000020mg PE=4 SV=1	[more]
B9RXC4_RICCO	1.4e-41	55.21	Vacuolar protein sorting-associated protein, putative OS=Ricinus communis GN=RCO...	[more]
A0A061DJI1_THECC	3.0e-41	60.63	Vacuolar protein sorting-associated protein 13A, putative OS=Theobroma cacao GN=...	[more]
A0A0D2V0U0_GOSRA	2.6e-40	57.06	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G024100 PE=4 SV=1	[more]

BLAST of CSPI01G32070 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G24740.1	2.0e-36	56.55	Protein of unknown function (DUF1162)	[more]

BLAST of CSPI01G32070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700211553\|gb\|KGN66649.1\|	8.9e-87	98.79	hypothetical protein Csa_1G652810 [Cucumis sativus]	[more]
gi\|778664064\|ref\|XP_011660209.1\|	1.2e-86	97.04	PREDICTED: uncharacterized protein LOC101204937 isoform X1 [Cucumis sativus]	[more]
gi\|778664067\|ref\|XP_011660210.1\|	1.2e-86	97.04	PREDICTED: uncharacterized protein LOC101204937 isoform X2 [Cucumis sativus]	[more]
gi\|659085896\|ref\|XP_008443663.1\|	2.1e-83	93.49	PREDICTED: putative vacuolar protein sorting-associated protein 13A [Cucumis mel...	[more]
gi\|731419934\|ref\|XP_010661192.1\|	5.5e-44	51.87	PREDICTED: putative vacuolar protein sorting-associated protein 13A isoform X2 [...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR026847	VPS13

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G32070.1	CSPI01G32070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026847	Vacuolar protein sorting-associated protein 13	PANTHER	PTHR16166	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13	coord: 33..193 score: 1.9
None	No IPR available	PANTHER	PTHR16166:SF100	SUBFAMILY NOT NAMED	coord: 33..193 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G32070	Cla009520	Watermelon (97103) v1	cpiwmB013
CSPI01G32070	MELO3C010029	Melon (DHL92) v3.5.1	cpimeB044
CSPI01G32070	Lsi06G006810	Bottle gourd (USVL1VR-Ls)	cpilsiB059
CSPI01G32070	MELO3C010033.2	Melon (DHL92) v3.6.1	cpimedB038
CSPI01G32070	Cla97C03G061100	Watermelon (97103) v2	cpiwmbB035

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G32070	Cucumber (Gy14) v1	cgycpiB528
CSPI01G32070	Cucurbita maxima (Rimu)	cmacpiB084
CSPI01G32070	Cucurbita maxima (Rimu)	cmacpiB058
CSPI01G32070	Cucurbita moschata (Rifu)	cmocpiB050
CSPI01G32070	Cucurbita moschata (Rifu)	cmocpiB078
CSPI01G32070	Cucumber (Chinese Long) v2	cpicuB001
CSPI01G32070	Watermelon (Charleston Gray)	cpiwcgB041
CSPI01G32070	Cucurbita pepo (Zucchini)	cpecpiB000
CSPI01G32070	Cucurbita pepo (Zucchini)	cpecpiB350
CSPI01G32070	Cucumber (Gy14) v2	cgybcpiB002
CSPI01G32070	Silver-seed gourd	carcpiB0571
CSPI01G32070	Silver-seed gourd	carcpiB1005
CSPI01G32070	Cucumber (Chinese Long) v3	cpicucB000
CSPI01G32070	Wax gourd	cpiwgoB111