CSPI01G24320 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACCACTGGCTGCCCTTCTTCCCTTCTTCCTTCCCCCACTCCCAGCAGGCCCTCACCTTTCTCCATTTTTCTCTCTCGCTCAGATTCCCCCTTCTTCTTCCTTTCTCACTTTTTTTATCTCTCTTCTTCATTCCACTTCAATGGCTTCCACTTCTGGAGATGGATCGTCTCTCGATCCACCCACCTCCAGCGACGCCCAGCTGCCTCCAATTCAGCCTGTGAGGATGCCTACAGTTGAAGAGATTCGCGGCCAAGATATTTGGGACAACTGTGCTGTTCGTAGTGTTGTTAGTGGAGTCATGGGTATGTCACCCACTTTGCCTTTTTTTTTTTTTTTTTTTTTTTTGCAAGTTCTCTCCAGCATTCTCACTTACGTACTCTGCTCTGGGTTCTCTCCCCATCCGGACAAACGAATCTTCGTTGTTTTGATCGATTATAACTGTGATAACTTTCCATCTCTCTCAATATGATACGTTGAATTTGGTTTTTAAACGAGATTGGTTTATGTAGTTTGGGTTGGGTAGTACTTTTTATTGTTTTCAAGTGGATTAAGACTGGGAGGCTTAATCTTTCTCATATAAACATTGTTAGTTTAAACTTCACTAGAACAACCACTGTCTTAATTATCATTTTTTAGTTACTATTAGTTAATTACGTTTCTCCCTCACTATGAGATATATGCAGGTGGTGGGCTTGGATTTTTCGTGGGATTATTTTTGGCGTCAACGGATACTTCAATGGTGCAGGATGAGATGACTGCTAGACAACAGTTTGTTAATACTGCTAAACAGATGGGACGGCGGAGTTGGGGTTCTGCAAAATCGTTTGCAGTCATGGGTTTAATTTTCTCAGCAGCAGAATGTGTTGTAGAAAAGGTATCAATTTCGTGTCTTATGCACAATTGCACATGGTTTTTTATTTTACGGGTTCTAATTCCATTTCGCTGATGTGTGTAGGCTCGAGCTAAACATGATATGACGAATACAATAGTTGCTGGTTGTGTAACTGGTGGTTCAATATCAGCTAAAGGTTGGCCTTCTTACCCTTCGTACTTACCTTATTTTTCAGTCAGGTGTTGCATACATGTGAATTTTCAGCCAGCCATGTAAAGATATTTTTTTGGAAACAATCTTGTGATTATCAATTTGTGATTCTTACCCTTCGTACTTGTGATTCGTTACTCTGGTTGAAACTAAAATATTTGTAGGTACCGGTGGTTATCAATGTGTGTGGATTAGTAGTTCAACCGTCTTGCTATTTTACTCTACTTCCATAATCTCTGATTTCATTTTGTTGATATCTCATCTCTTAAGTTGCCGGGGAATAACCTGTTTATTTTTCATGGTTGGCATCGATTGCACTGCTGTGTCTGCATTCTGCACAAGATTGTGCCATTCTTTTTCTTTTCAGTTTTTGCTATTTGCTAATATGCTCTAAAATTCTTTCGTATCCAGTGGCCTTGGTGAAATTTAAATTTTAAAATTAGAAACAATTTCATTAATGTGTAAATTTTGCTAAAGTAAAAAAATTTAAGGAGACACCCTTGGAAAGACATTTCTCTTCTTCATCTCCCCTTTTCCCATTTTGTGTTTTGCGTTGTGGGTGAAGGTAAGGAAACACTTTTGTGGGAGGATCATTGGGTGGATGGATAGTCCGCTCTCTTCGGCGTTTCCTAGTTTATATCATCTGTCTTCTTTGAAAAATTGCTTGGTGTCAGATGTTTTGGTGTGGTCTGGGAACTCAGTCTCTTTCTCCTCTGGTTTTCGTCGTCCGTTCTCCAATGAAGAGTCGACTAATGTGACTTTTTTTCTTTCTTTGATTGACGGTTTAGATTTTAGATTGGGGAGAAGGGATGTTCGGGTTTGGAGCCCTAATTCGGTGGAGGGTTTTTCTTGCAAGTCTTTCTTTAGGATTTTAGTTAACCATTCTTCCGTTGTTGAGTCGGTCTTTGTTGTTTTATGGAGTTTAAAGATTCTTAAGAAAGTTAGGTTGTTTGTCTGGCAAGTCTTGCTTGGTTTTGTGAACTCAATGGATAAGGTCTCGAGAAAGCTGCCTTCGTTAATGGTCCTTTTTACTGCATTCTTTATCAGAAGGAAAAGGAAAACCTGAATCACTTTATTTGGGTGTGGCCGTATGCAAGATCAATTTGGATCCTTTTTTTGCAGGAGTTTGATGTTTCATTAGCTTGCCAGAGGAACATTCACATGATGATCGGGGAATTCCTCCTTCACCCTTCTTTCAGAGAGAAAGGGCGTTTCCTTTGGGGTGATGGGGTGTGTGATGTGATTTGGGTTTGTGGGGTGAGAAACAATAGTGTTCAAGGGTGTGGATAGGAACCCTAGTGAGGTTTGGTCCTTGACGAAGTTTCATGTTTCACTTCAACTATTTTACTTAGTCGGAAACCCTTTCTTTAGTGGGATTCTCTTTTAGGGGACTTTTTTTTTTGGATGCCTTTGTCTTCTTTCATTTCTTCTCAATGGAAGCATTTGTTTTAAAAAAATAATAATAGTAAAAAAAAAAATTAAGGAGTTTGCTCATAGACAGACACCCTGAATTGGTTTATAAATTATACATGGGAGGGGAGTAGTTACATTTACATAGTTGTTTTGAACAGAATCTGCAAAGAGAAGCAACAAAGGCAGTGATCTGCTGAAGTGTTGTTGGAGTTGGAGGATCCTTGAAAATTTCTCCTACTTCTGTTTAGCCAAACTTCACTAGAACAAATTTAAAAGCATTTAGTCAAAGTACTCTAGCTAATAGAATTGCTAAGAAGAGTGTTCTTGGTCGAGAAGAGCATAGCCTAGCTCATCTCAGAAGCACAAAAATTTCTCCACAACAACTGAAAGGTAAAGGACGACAGAAAAAATGTCTAGCATTCTCAGTATATTCTTGGAAATAAATTGCAATTTGAGAAATAAACCTGTGCTCTGTGCAGATTCCTTTCCTGGTCTTGTTCTTTGTTTATGTCTCCTAGTAAAGTCAAAAGTGAAGCTTTTACCTTCATAGGATATACCTGTCTTTTCCTGAGAAATTCGTCTTTGTTTGTGTAAGCCTCCAAGTAAAGTCCAAAGTGAAGCTGTTACCTTCATTGGATAATCGTGACTTTTCCTGAGAAGTTCATCTTTGTTTGTGTAAACCTCCAAGTGAAGTCCAAACTGAAACTTTTTCCTTCATTGGGTTCTTGTCATTTCGTTTCCTGATTAACCTGTCTTTCCCAATTCTCATTGCTACTAACATTACAGTTTTTCAGCATCAGAGAAGGATTTTCCACCTAAATCTTCCCGTCTTTCAAATTTCCATGCAAATTAAAGAACAGAGAGCTATGTTAGTGAACTGCCTTACAGATACAAGTTTGCTACTAGTTATATCATACATAGCCTGTGAATGGTGTTTGACAGTGGCTGGTCCACGATTCAAATATCTTAAAAAGTTTAACATATTTTCTCTGCCAACGTGTTTAAGGAAATCTAAACTTCTACAAAAAGAATGATTGGTAGAACTTAGGAGGAAAGACCACACATGAACATAGGTGAAACACCCATTGAATGAACTACTTTACAATTACCGCAAGAAGGGGGGAGGTTGTTAGGTTGGTTTGTAGTTTCTTCCTCTTGGATTTGTAGTAGGAGCTCAATTTTTTTGCATGCCATTTTGGCTCATACAACCAAAGACACATGTACATTTTTAATGTGGAGAAAATTCTAGGACAGTACGAGGAGAGTTTTGGTAAAGCTTTAGGAGCAATCTCAAGAAAAAAATTCTTTAGAATGATATAGGCATGCCATCTGATCTTCACTTAGGGAATGAGGTATGATTCTTGTTGACTTAACTCTCGTTAAACCTTTGATTATAAAACGTATCCCTGATTTTAAAAGATTTGGAGTAGAACCAACTGCCATCTAACAGTACACTTCTCGGCTCCTCTTCACTGTTAGCAAGAGCAAAGCCGAATTTATTGAAGAGCTATTTTGTTGGGTCCCGTTGGTCGAATATGAATTTGTAACCAAAAACTGAATTGATGTTCAGCAATTCAAGCACGTAGTTTGGGTTTCTAATCCCAGTCGTTCTCAGTTGAAGTAAACAATGAGGGAGGGACTTCCAATGGGTTTTTGGATAACAAGAGATCGTTAAAATTTTATTTTGATCTTGTACCTTGGACCTCATTTTATTTTGGTACTTCCAAATGTTTCTATACTATCAAAATATTAAAATCAGTCTATATTGTTAGTTTGAAGTTATTTGTTGTTGTTTTGTCAAACATGGTAAAGTAATAATAATAATACTTTTCATTAAGAAAAGTTACGATGTGAATCTGCTTCTAAAATATATAGAGGGAAGAATGAATACTCCCTCTAAGGATTTTATTTGAACACCAGAAGGCTTAGAGAGAAGAATGAGTTATGGTCACTACCTACCTAGGATTTAATAGTCGAGATGTGAGCAAATTGACCCATCTATATGGGATTTAAATATTAAGACTCTTTTTTAATATTTATTGAATATAAGGGGATTAAATTTAGACCATCCGGAAGTACAGAGAGGGAGTCATATATAGACCAAAATGATATTTAAACCAAAATCCTTGAAATTGAGATATGATTTCTTTTGGTGCCTTCTGTAGAAATCTGAATTGTAGTTTCTGCTTTAATTTTGCATAGCTATTCTGCATCAAACTTGATGACAATCTCTTTGGCCTCCTACCATTCTTTTATCTATTGATCAATGTATGAAGAGTGAATGGCAAAATAACATAACTGGCTATGTTAACTGAGATTGTCTTTATTTTAAAGTCGTCAATTATACACTCCTCATTTTCATCCCAAGCTGCCACATCTCATCTTATATGGTCTTAATCTCAGGTGGCCCAAAGGCAGCTTGTGCTGGTTGTGCAGGTTTTGCAGCATTCTCAGCGTTGATAGAGAAGTTTTTGGAAAGACATACTTGAGCTGCGTTTGTGCTCACAATTTTCTGATAGCAAAAACAAATCAATGGTAGAGAAATAATAGTTAGCCTGCAGCGTTACCATTCTTTTCATAGTAAAAATATGAACCTTCTTTTCTTTTGTTTTTTTTCTTTATTTGGGATAACTTTTAGAATATTGTCCCCATTGTTTTAGTAAAACATTGTTCACAATTCCATTTGATTTGGAAGTTGTTTATTTTAATAGAGAGGAAATTTAGCTATTTAGTTTGAACCTCAGTTGACATTCAGATGGTCTCCATATTTACAATAAACAAACGCCTATGAACTATAATGGTTGCTG ATGGCTTCCACTTCTGGAGATGGATCGTCTCTCGATCCACCCACCTCCAGCGACGCCCAGCTGCCTCCAATTCAGCCTGTGAGGATGCCTACAGTTGAAGAGATTCGCGGCCAAGATATTTGGGACAACTGTGCTGTTCGTAGTGTTGTTAGTGGAGTCATGGGTGGTGGGCTTGGATTTTTCGTGGGATTATTTTTGGCGTCAACGGATACTTCAATGGTGCAGGATGAGATGACTGCTAGACAACAGTTTGTTAATACTGCTAAACAGATGGGACGGCGGAGTTGGGGTTCTGCAAAATCGTTTGCAGTCATGGGTTTAATTTTCTCAGCAGCAGAATGTGTTGTAGAAAAGGCTCGAGCTAAACATGATATGACGAATACAATAGTTGCTGGTTGTGTAACTGGTGGTTCAATATCAGCTAAAGGTGGCCCAAAGGCAGCTTGTGCTGGTTGTGCAGGTTTTGCAGCATTCTCAGCGTTGATAGAGAAGTTTTTGGAAAGACATACTTGA ATGGCTTCCACTTCTGGAGATGGATCGTCTCTCGATCCACCCACCTCCAGCGACGCCCAGCTGCCTCCAATTCAGCCTGTGAGGATGCCTACAGTTGAAGAGATTCGCGGCCAAGATATTTGGGACAACTGTGCTGTTCGTAGTGTTGTTAGTGGAGTCATGGGTGGTGGGCTTGGATTTTTCGTGGGATTATTTTTGGCGTCAACGGATACTTCAATGGTGCAGGATGAGATGACTGCTAGACAACAGTTTGTTAATACTGCTAAACAGATGGGACGGCGGAGTTGGGGTTCTGCAAAATCGTTTGCAGTCATGGGTTTAATTTTCTCAGCAGCAGAATGTGTTGTAGAAAAGGCTCGAGCTAAACATGATATGACGAATACAATAGTTGCTGGTTGTGTAACTGGTGGTTCAATATCAGCTAAAGGTGGCCCAAAGGCAGCTTGTGCTGGTTGTGCAGGTTTTGCAGCATTCTCAGCGTTGATAGAGAAGTTTTTGGAAAGACATACTTGA
BLAST of CSPI01G24320 vs. Swiss-Prot
Match: TI221_ARATH (Mitochondrial import inner membrane translocase subunit TIM22-1 OS=Arabidopsis thaliana GN=TIM22-1 PE=1 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 7.4e-62 Identity = 113/158 (71.52%), Postives = 131/158 (82.91%), Query Frame = 1
BLAST of CSPI01G24320 vs. Swiss-Prot
Match: TI224_ARATH (Mitochondrial import inner membrane translocase subunit TIM22-4 OS=Arabidopsis thaliana GN=TIM22-4 PE=2 SV=3) HSP 1 Score: 222.6 bits (566), Expect = 3.2e-57 Identity = 105/142 (73.94%), Postives = 121/142 (85.21%), Query Frame = 1
BLAST of CSPI01G24320 vs. Swiss-Prot
Match: TIM22_ASPOR (Mitochondrial import inner membrane translocase subunit tim22 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=tim22 PE=3 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 2.0e-27 Identity = 62/132 (46.97%), Postives = 89/132 (67.42%), Query Frame = 1
BLAST of CSPI01G24320 vs. Swiss-Prot
Match: TIM22_DEBHA (Mitochondrial import inner membrane translocase subunit TIM22 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=TIM22 PE=3 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 6.8e-23 Identity = 56/136 (41.18%), Postives = 87/136 (63.97%), Query Frame = 1
BLAST of CSPI01G24320 vs. Swiss-Prot
Match: TIM22_YARLI (Mitochondrial import inner membrane translocase subunit TIM22 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=TIM22 PE=3 SV=2) HSP 1 Score: 108.2 bits (269), Expect = 8.9e-23 Identity = 66/166 (39.76%), Postives = 93/166 (56.02%), Query Frame = 1
BLAST of CSPI01G24320 vs. TrEMBL
Match: A0A0A0M0Y0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G533580 PE=4 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 1.4e-88 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1
BLAST of CSPI01G24320 vs. TrEMBL
Match: D7SJS5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g07140 PE=4 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 3.5e-66 Identity = 128/169 (75.74%), Postives = 147/169 (86.98%), Query Frame = 1
BLAST of CSPI01G24320 vs. TrEMBL
Match: A0A061FVU1_THECC (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein isoform 1 OS=Theobroma cacao GN=TCM_012890 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 9.4e-64 Identity = 123/169 (72.78%), Postives = 145/169 (85.80%), Query Frame = 1
BLAST of CSPI01G24320 vs. TrEMBL
Match: I1LP70_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G017200 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 2.7e-63 Identity = 124/169 (73.37%), Postives = 142/169 (84.02%), Query Frame = 1
BLAST of CSPI01G24320 vs. TrEMBL
Match: A0A151TLR3_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_021619 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 2.7e-63 Identity = 122/169 (72.19%), Postives = 143/169 (84.62%), Query Frame = 1
BLAST of CSPI01G24320 vs. TAIR10
Match: AT3G10110.1 (AT3G10110.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein) HSP 1 Score: 238.0 bits (606), Expect = 4.2e-63 Identity = 113/158 (71.52%), Postives = 131/158 (82.91%), Query Frame = 1
BLAST of CSPI01G24320 vs. TAIR10
Match: AT1G18320.1 (AT1G18320.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein) HSP 1 Score: 222.6 bits (566), Expect = 1.8e-58 Identity = 105/142 (73.94%), Postives = 121/142 (85.21%), Query Frame = 1
BLAST of CSPI01G24320 vs. TAIR10
Match: AT4G26670.1 (AT4G26670.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein) HSP 1 Score: 56.6 bits (135), Expect = 1.7e-08 Identity = 30/73 (41.10%), Postives = 43/73 (58.90%), Query Frame = 1
BLAST of CSPI01G24320 vs. TAIR10
Match: AT5G55510.1 (AT5G55510.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein) HSP 1 Score: 56.6 bits (135), Expect = 1.7e-08 Identity = 30/73 (41.10%), Postives = 43/73 (58.90%), Query Frame = 1
BLAST of CSPI01G24320 vs. NCBI nr
Match: gi|449472260|ref|XP_004153539.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-4-like [Cucumis sativus]) HSP 1 Score: 333.6 bits (854), Expect = 2.1e-88 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1
BLAST of CSPI01G24320 vs. NCBI nr
Match: gi|659114969|ref|XP_008457318.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-4-like [Cucumis melo]) HSP 1 Score: 298.9 bits (764), Expect = 5.7e-78 Identity = 149/170 (87.65%), Postives = 158/170 (92.94%), Query Frame = 1
BLAST of CSPI01G24320 vs. NCBI nr
Match: gi|225434486|ref|XP_002275144.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-4 [Vitis vinifera]) HSP 1 Score: 259.2 bits (661), Expect = 5.0e-66 Identity = 128/169 (75.74%), Postives = 147/169 (86.98%), Query Frame = 1
BLAST of CSPI01G24320 vs. NCBI nr
Match: gi|1021489595|ref|XP_016187810.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-4-like [Arachis ipaensis]) HSP 1 Score: 254.2 bits (648), Expect = 1.6e-64 Identity = 128/169 (75.74%), Postives = 144/169 (85.21%), Query Frame = 1
BLAST of CSPI01G24320 vs. NCBI nr
Match: gi|1009119800|ref|XP_015876578.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-4-like isoform X1 [Ziziphus jujuba]) HSP 1 Score: 253.1 bits (645), Expect = 3.6e-64 Identity = 124/168 (73.81%), Postives = 143/168 (85.12%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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