CSPI01G18690 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G18690
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 14113444 .. 14113617 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGCAAAGAGGCCACTGAAGGAGAAGAAAGAGACCCCTGTCGCCATTAAACCTCAGTGGAGTTTAGGGCCCATCTCCTCAGCGGCACAACCTACCAAGCACAAGAGTGGGTTCAAGAAGAGAGAGACTGAAAAAAGCAAACCTAAACCATTAAAGGGGATGAAGAAGTAG

mRNA sequence

ATGGGAGCAAAGAGGCCACTGAAGGAGAAGAAAGAGACCCCTGTCGCCATTAAACCTCAGTGGAGTTTAGGGCCCATCTCCTCAGCGGCACAACCTACCAAGCACAAGAGTGGGTTCAAGAAGAGAGAGACTGAAAAAAGCAAACCTAAACCATTAAAGGGGATGAAGAAGTAG

Coding sequence (CDS)

ATGGGAGCAAAGAGGCCACTGAAGGAGAAGAAAGAGACCCCTGTCGCCATTAAACCTCAGTGGAGTTTAGGGCCCATCTCCTCAGCGGCACAACCTACCAAGCACAAGAGTGGGTTCAAGAAGAGAGAGACTGAAAAAAGCAAACCTAAACCATTAAAGGGGATGAAGAAGTAG
Homology
[Close]
BLAST of CSPI01G18690 vs. TrEMBL
Match: A0A0A0LWE6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G320330 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.8e-22
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1 

Query: 1  MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK 58
          MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK
Sbjct: 1  MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK 57

[Close]
BLAST of CSPI01G18690 vs. NCBI nr
Match: gi|700210218|gb|KGN65314.1| (hypothetical protein Csa_1G320330 [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 2.5e-22
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1 

Query: 1  MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK 58
          MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK
Sbjct: 1  MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK 57

The following BLAST results are available for this feature:
BLAST of CSPI01G18690 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G18690 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWE6_CUCSA1.8e-22100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G320330 PE=4 SV=1[more]
BLAST of CSPI01G18690 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI01G18690 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700210218|gb|KGN65314.1|2.5e-22100.00hypothetical protein Csa_1G320330 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G18690.1CSPI01G18690.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G18690Csa1G320330Cucumber (Chinese Long) v2cpicuB001
CSPI01G18690MELO3C010360Melon (DHL92) v3.5.1cpimeB060
CSPI01G18690MELO3C010360.2Melon (DHL92) v3.6.1cpimedB054
CSPI01G18690CsaV3_1G029910Cucumber (Chinese Long) v3cpicucB000
CSPI01G18690CmoCh10G006000Cucurbita moschata (Rifu)cmocpiB054
CSPI01G18690Cp4.1LG18g04820Cucurbita pepo (Zucchini)cpecpiB355
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G18690Cucurbita pepo (Zucchini)cpecpiB091
CSPI01G18690Cucurbita pepo (Zucchini)cpecpiB647
CSPI01G18690Cucurbita pepo (Zucchini)cpecpiB661
CSPI01G18690Bottle gourd (USVL1VR-Ls)cpilsiB009
CSPI01G18690Bottle gourd (USVL1VR-Ls)cpilsiB061
CSPI01G18690Melon (DHL92) v3.6.1cpimedB068
CSPI01G18690Cucumber (Gy14) v2cgybcpiB002
CSPI01G18690Cucumber (Gy14) v2cgybcpiB051
CSPI01G18690Silver-seed gourdcarcpiB0036
CSPI01G18690Silver-seed gourdcarcpiB0042
CSPI01G18690Silver-seed gourdcarcpiB0139
CSPI01G18690Silver-seed gourdcarcpiB0600
CSPI01G18690Cucumber (Chinese Long) v3cpicucB021
CSPI01G18690Watermelon (97103) v2cpiwmbB019
CSPI01G18690Watermelon (97103) v2cpiwmbB070
CSPI01G18690Wax gourdcpiwgoB002
CSPI01G18690Wax gourdcpiwgoB103
CSPI01G18690Wild cucumber (PI 183967)cpicpiB007
CSPI01G18690Cucumber (Gy14) v1cgycpiB185
CSPI01G18690Cucumber (Gy14) v1cgycpiB443
CSPI01G18690Cucurbita maxima (Rimu)cmacpiB064
CSPI01G18690Cucurbita maxima (Rimu)cmacpiB088
CSPI01G18690Cucurbita maxima (Rimu)cmacpiB108
CSPI01G18690Cucurbita maxima (Rimu)cmacpiB791
CSPI01G18690Cucurbita moschata (Rifu)cmocpiB082
CSPI01G18690Cucurbita moschata (Rifu)cmocpiB100
CSPI01G18690Cucumber (Chinese Long) v2cpicuB016
CSPI01G18690Melon (DHL92) v3.5.1cpimeB076
CSPI01G18690Watermelon (Charleston Gray)cpiwcgB008
CSPI01G18690Watermelon (Charleston Gray)cpiwcgB073
CSPI01G18690Watermelon (97103) v1cpiwmB083
CSPI01G18690Watermelon (97103) v1cpiwmB088