CSPI01G16210 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G16210
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 11734971 .. 11735243 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGAAGGATACTCAAAAGCAAGAATTAGAAACTCATTTGAAGATGAGTTAAAGGTTCATAAACATGAATCTGTACGAAGACAAGTTTCCAAGAACACCACCATCGGTAATTTTGGGAGGGAGAAGCTCCTCAACCTCGATCTGAGTATCAGTTTGTTAAAGATAAAGAAAAGATTGATCAAATTTGTCCAACATCAAGGATCCAAGGTGAAAAGTCTTGTCGGTCTCGACCAAATGAAGATTGATCTAAGGAGACATCTAAAGCGTTAG

mRNA sequence

ATGGGGGAAGGATACTCAAAAGCAAGAATTAGAAACTCATTTGAAGATGAGTTAAAGGTTCATAAACATGAATCTGTACGAAGACAAGTTTCCAAGAACACCACCATCGGTAATTTTGGGAGGGAGAAGCTCCTCAACCTCGATCTGAGTATCAGTTTGTTAAAGATAAAGAAAAGATTGATCAAATTTGTCCAACATCAAGGATCCAAGGTGAAAAGTCTTGTCGGTCTCGACCAAATGAAGATTGATCTAAGGAGACATCTAAAGCGTTAG

Coding sequence (CDS)

ATGGGGGAAGGATACTCAAAAGCAAGAATTAGAAACTCATTTGAAGATGAGTTAAAGGTTCATAAACATGAATCTGTACGAAGACAAGTTTCCAAGAACACCACCATCGGTAATTTTGGGAGGGAGAAGCTCCTCAACCTCGATCTGAGTATCAGTTTGTTAAAGATAAAGAAAAGATTGATCAAATTTGTCCAACATCAAGGATCCAAGGTGAAAAGTCTTGTCGGTCTCGACCAAATGAAGATTGATCTAAGGAGACATCTAAAGCGTTAG
Homology
[Close]
BLAST of CSPI01G16210 vs. TrEMBL
Match: A0A0A0LW87_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G196245 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.1e-40
Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 1 

Query: 1  MGEGYSKARIRNSFEDELKVHKHESVRRQVSKNTTIGNFGREKLLNLDLSISLLKIKKRL 60
          MGEGYSKARIRNSFEDELKVHKHESVRRQVSKNTTIGNFGREKLLNL LSISLLKIKKRL
Sbjct: 1  MGEGYSKARIRNSFEDELKVHKHESVRRQVSKNTTIGNFGREKLLNLGLSISLLKIKKRL 60

Query: 61 IKFVQHQGSKVKSLVGLDQMKIDLRRHLKR 91
          IKFVQHQGSKVKSLVGLDQMKIDLRRHLKR
Sbjct: 61 IKFVQHQGSKVKSLVGLDQMKIDLRRHLKR 90

[Close]
BLAST of CSPI01G16210 vs. NCBI nr
Match: gi|700209986|gb|KGN65082.1| (hypothetical protein Csa_1G196245 [Cucumis sativus])

HSP 1 Score: 171.4 bits (433), Expect = 7.3e-40
Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 1 

Query: 1  MGEGYSKARIRNSFEDELKVHKHESVRRQVSKNTTIGNFGREKLLNLDLSISLLKIKKRL 60
          MGEGYSKARIRNSFEDELKVHKHESVRRQVSKNTTIGNFGREKLLNL LSISLLKIKKRL
Sbjct: 1  MGEGYSKARIRNSFEDELKVHKHESVRRQVSKNTTIGNFGREKLLNLGLSISLLKIKKRL 60

Query: 61 IKFVQHQGSKVKSLVGLDQMKIDLRRHLKR 91
          IKFVQHQGSKVKSLVGLDQMKIDLRRHLKR
Sbjct: 61 IKFVQHQGSKVKSLVGLDQMKIDLRRHLKR 90

The following BLAST results are available for this feature:
BLAST of CSPI01G16210 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G16210 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LW87_CUCSA5.1e-4098.89Uncharacterized protein OS=Cucumis sativus GN=Csa_1G196245 PE=4 SV=1[more]
BLAST of CSPI01G16210 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI01G16210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209986|gb|KGN65082.1|7.3e-4098.89hypothetical protein Csa_1G196245 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G16210.1CSPI01G16210.1mRNA