CSPI01G16180 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAACAAGGAGGAAGGTCGTGGATGGAAACACGGTTTTGAAGAAGCTATCTGTCTTTTAATAAGTCGAAGCCAAAAAGCATTTTAGAGGGAAGGAGATAAGAATTTCCCAATTTTAATTTTCCCCCCGATACGGATCGGACGCCCCACCCTGACGCCAGCGCCACCGATCCGACCGATTGATTGATTGATGGAGGGCGTTGGTGCCCGACTCGGCCGCTCTTCAACTCGCTACGGACCCGCCACCGTCTTCACTGGCCCGGTCAGGAAGTGGAAGAAGAAATGGATCCACGTTGCGCCGTCGACCACCGCTTCCAACAACCATTCCCACTCTCAGCGCCATACTAACCCCAACAATGTTACCGCCAATGCCACTGCCAACTCTTCTACTAACGCTTCGCATCTTTTACTTTTCAAGTGGACGCCTATTACACAGAGTCTCAACAATGGCAACGCCGATGAAAAGAACGCCGGCAAAGAGGACACCCCAACGGTGACAGAGGAGCCTCCTCGCCGAAAATTTAAATACATGCCGGTACCCGCCTTTTTCTTTCATTTGAATTATCTGGGTTTGTTGAATTTTGAAGTTTTAAATGCATTGCTGCAGCTTTGTTGGTCTACATTACTGGGATTTTTAGATTTTCGTGTCTGAGTGTACTTGTAGGCAATTGGCAAATGTGGACCTTTGTCATATCGTGATAATTTGACAGCTTCCTTATCCACGCAGTACGGTGCATATGTCCTATTTAGGCTTCCAGTTGGGGTGTAA ATGGAGGGCGTTGGTGCCCGACTCGGCCGCTCTTCAACTCGCTACGGACCCGCCACCGTCTTCACTGGCCCGGTCAGGAAGTGGAAGAAGAAATGGATCCACGTTGCGCCGTCGACCACCGCTTCCAACAACCATTCCCACTCTCAGCGCCATACTAACCCCAACAATGTTACCGCCAATGCCACTGCCAACTCTTCTACTAACGCTTCGCATCTTTTACTTTTCAAGTGGACGCCTATTACACAGAGTCTCAACAATGGCAACGCCGATGAAAAGAACGCCGGCAAAGAGGACACCCCAACGGTGACAGAGGAGCCTCCTCGCCGAAAATTTAAATACATGCCGGCAATTGGCAAATGTGGACCTTTGTCATATCGTGATAATTTGACAGCTTCCTTATCCACGCAGTACGGTGCATATGTCCTATTTAGGCTTCCAGTTGGGGTGTAA ATGGAGGGCGTTGGTGCCCGACTCGGCCGCTCTTCAACTCGCTACGGACCCGCCACCGTCTTCACTGGCCCGGTCAGGAAGTGGAAGAAGAAATGGATCCACGTTGCGCCGTCGACCACCGCTTCCAACAACCATTCCCACTCTCAGCGCCATACTAACCCCAACAATGTTACCGCCAATGCCACTGCCAACTCTTCTACTAACGCTTCGCATCTTTTACTTTTCAAGTGGACGCCTATTACACAGAGTCTCAACAATGGCAACGCCGATGAAAAGAACGCCGGCAAAGAGGACACCCCAACGGTGACAGAGGAGCCTCCTCGCCGAAAATTTAAATACATGCCGGCAATTGGCAAATGTGGACCTTTGTCATATCGTGATAATTTGACAGCTTCCTTATCCACGCAGTACGGTGCATATGTCCTATTTAGGCTTCCAGTTGGGGTGTAA
BLAST of CSPI01G16180 vs. TrEMBL
Match: A0A0A0LT57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G195240 PE=4 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 6.3e-80 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of CSPI01G16180 vs. TrEMBL
Match: A0A0B0NRB8_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_05180 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 2.9e-32 Identity = 77/118 (65.25%), Postives = 87/118 (73.73%), Query Frame = 1
BLAST of CSPI01G16180 vs. TrEMBL
Match: A0A0B0Q1D6_GOSAR (Protein FAM59A OS=Gossypium arboreum GN=F383_04771 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 8.4e-32 Identity = 75/117 (64.10%), Postives = 91/117 (77.78%), Query Frame = 1
BLAST of CSPI01G16180 vs. TrEMBL
Match: A0A0D2VGN6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G010300 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 8.4e-32 Identity = 75/117 (64.10%), Postives = 91/117 (77.78%), Query Frame = 1
BLAST of CSPI01G16180 vs. TrEMBL
Match: A0A0D2UKG0_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_011G010200 PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.1e-31 Identity = 75/117 (64.10%), Postives = 90/117 (76.92%), Query Frame = 1
BLAST of CSPI01G16180 vs. TAIR10
Match: AT4G22320.1 (AT4G22320.1 unknown protein) HSP 1 Score: 133.7 bits (335), Expect = 9.7e-32 Identity = 71/119 (59.66%), Postives = 87/119 (73.11%), Query Frame = 1
BLAST of CSPI01G16180 vs. TAIR10
Match: AT5G55210.1 (AT5G55210.1 unknown protein) HSP 1 Score: 79.7 bits (195), Expect = 1.7e-15 Identity = 53/118 (44.92%), Postives = 67/118 (56.78%), Query Frame = 1
BLAST of CSPI01G16180 vs. NCBI nr
Match: gi|700209984|gb|KGN65080.1| (hypothetical protein Csa_1G195240 [Cucumis sativus]) HSP 1 Score: 304.7 bits (779), Expect = 9.1e-80 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of CSPI01G16180 vs. NCBI nr
Match: gi|449465421|ref|XP_004150426.1| (PREDICTED: uncharacterized protein LOC101221727 isoform X1 [Cucumis sativus]) HSP 1 Score: 234.6 bits (597), Expect = 1.2e-58 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1
BLAST of CSPI01G16180 vs. NCBI nr
Match: gi|778659850|ref|XP_011655175.1| (PREDICTED: uncharacterized protein LOC101221727 isoform X2 [Cucumis sativus]) HSP 1 Score: 234.6 bits (597), Expect = 1.2e-58 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1
BLAST of CSPI01G16180 vs. NCBI nr
Match: gi|659118145|ref|XP_008458970.1| (PREDICTED: uncharacterized protein LOC103498224 isoform X2 [Cucumis melo]) HSP 1 Score: 229.9 bits (585), Expect = 2.8e-57 Identity = 112/115 (97.39%), Postives = 114/115 (99.13%), Query Frame = 1
BLAST of CSPI01G16180 vs. NCBI nr
Match: gi|659118143|ref|XP_008458968.1| (PREDICTED: uncharacterized protein LOC103498224 isoform X1 [Cucumis melo]) HSP 1 Score: 229.9 bits (585), Expect = 2.8e-57 Identity = 112/115 (97.39%), Postives = 114/115 (99.13%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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