CSPI01G15450 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCTTTGACTCTAAGGAAAATCTTTTGTTGGCTCTTAAGAGGTATTGGGTGACACAACACTATGAAATTGTTGTAGTCGAATCAAACCAACATTTGTGGAATATTCGATGCAAACAGTGGAGTAATGGCTGCAACTGGAGGTTACGTGCTACGAAGCGTAAGAGCCACAAATTGTTTGAAATGACTAAGCTCCAAGGAGAGCACTCGTGTCTGTACTCAAATTTAACACAAGATCACTCACAGCTAGATTCAAATTTCATGAGTGTTCAAATTCAAAACATGGTGAAAGCTGATCCTATTATTATTGTGCCTATGCTTGTCGAAATCATAAGACAACAATACGGTTACCGTGTTAAGTATGGACGAGTTTGGCAAGGAAAGAAAAAAGCTTTGATAACCGTTTTTGGTGATTGGGAGAAATCATATAATGAGCTTCCATACTAG ATGATCTTTGACTCTAAGGAAAATCTTTTGTTGGCTCTTAAGAGGTATTGGGTGACACAACACTATGAAATTGTTGTAGTCGAATCAAACCAACATTTGTGGAATATTCGATGCAAACAGTGGAGTAATGGCTGCAACTGGAGGTTACGTGCTACGAAGCGTAAGAGCCACAAATTGTTTGAAATGACTAAGCTCCAAGGAGAGCACTCGTGTCTGTACTCAAATTTAACACAAGATCACTCACAGCTAGATTCAAATTTCATGAGTGTTCAAATTCAAAACATGGTGAAAGCTGATCCTATTATTATTGTGCCTATGCTTGTCGAAATCATAAGACAACAATACGGTTACCGTGTTAAGTATGGACGAGTTTGGCAAGGAAAGAAAAAAGCTTTGATAACCGTTTTTGGTGATTGGGAGAAATCATATAATGAGCTTCCATACTAG ATGATCTTTGACTCTAAGGAAAATCTTTTGTTGGCTCTTAAGAGGTATTGGGTGACACAACACTATGAAATTGTTGTAGTCGAATCAAACCAACATTTGTGGAATATTCGATGCAAACAGTGGAGTAATGGCTGCAACTGGAGGTTACGTGCTACGAAGCGTAAGAGCCACAAATTGTTTGAAATGACTAAGCTCCAAGGAGAGCACTCGTGTCTGTACTCAAATTTAACACAAGATCACTCACAGCTAGATTCAAATTTCATGAGTGTTCAAATTCAAAACATGGTGAAAGCTGATCCTATTATTATTGTGCCTATGCTTGTCGAAATCATAAGACAACAATACGGTTACCGTGTTAAGTATGGACGAGTTTGGCAAGGAAAGAAAAAAGCTTTGATAACCGTTTTTGGTGATTGGGAGAAATCATATAATGAGCTTCCATACTAG
BLAST of CSPI01G15450 vs. TrEMBL
Match: A5BJW1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008825 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.1e-39 Identity = 73/145 (50.34%), Postives = 106/145 (73.10%), Query Frame = 1
BLAST of CSPI01G15450 vs. TrEMBL
Match: A5B5G3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019818 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.1e-39 Identity = 73/145 (50.34%), Postives = 106/145 (73.10%), Query Frame = 1
BLAST of CSPI01G15450 vs. TrEMBL
Match: A5BXK2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022914 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 4.1e-39 Identity = 72/145 (49.66%), Postives = 105/145 (72.41%), Query Frame = 1
BLAST of CSPI01G15450 vs. TrEMBL
Match: A5BD12_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040275 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 7.3e-36 Identity = 66/145 (45.52%), Postives = 106/145 (73.10%), Query Frame = 1
BLAST of CSPI01G15450 vs. TrEMBL
Match: A5BUS6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042537 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.2e-35 Identity = 70/145 (48.28%), Postives = 99/145 (68.28%), Query Frame = 1
BLAST of CSPI01G15450 vs. TAIR10
Match: AT1G64255.1 (AT1G64255.1 MuDR family transposase) HSP 1 Score: 62.0 bits (149), Expect = 3.6e-10 Identity = 37/123 (30.08%), Postives = 64/123 (52.03%), Query Frame = 1
BLAST of CSPI01G15450 vs. NCBI nr
Match: gi|659101520|ref|XP_008451648.1| (PREDICTED: uncharacterized protein LOC103492881 [Cucumis melo]) HSP 1 Score: 246.5 bits (628), Expect = 2.9e-62 Identity = 108/148 (72.97%), Postives = 135/148 (91.22%), Query Frame = 1
BLAST of CSPI01G15450 vs. NCBI nr
Match: gi|731440008|ref|XP_010647557.1| (PREDICTED: uncharacterized protein LOC104878656, partial [Vitis vinifera]) HSP 1 Score: 172.6 bits (436), Expect = 5.3e-40 Identity = 71/145 (48.97%), Postives = 109/145 (75.17%), Query Frame = 1
BLAST of CSPI01G15450 vs. NCBI nr
Match: gi|147780218|emb|CAN72427.1| (hypothetical protein VITISV_008825 [Vitis vinifera]) HSP 1 Score: 171.0 bits (432), Expect = 1.6e-39 Identity = 73/145 (50.34%), Postives = 106/145 (73.10%), Query Frame = 1
BLAST of CSPI01G15450 vs. NCBI nr
Match: gi|731396581|ref|XP_010652563.1| (PREDICTED: uncharacterized protein LOC104879858 [Vitis vinifera]) HSP 1 Score: 171.0 bits (432), Expect = 1.6e-39 Identity = 73/145 (50.34%), Postives = 106/145 (73.10%), Query Frame = 1
BLAST of CSPI01G15450 vs. NCBI nr
Match: gi|147857559|emb|CAN78664.1| (hypothetical protein VITISV_019818 [Vitis vinifera]) HSP 1 Score: 171.0 bits (432), Expect = 1.6e-39 Identity = 73/145 (50.34%), Postives = 106/145 (73.10%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |