CSPI01G14880 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G14880
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Envelope-like protein
Location	Chr1 : 10537388 .. 10537720 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTACAATATGGTCTATCAATGGAATTTTGGCTGCATCCTTGAGTTTAAAGTATGTCATTTTACACGAAATTGGAATTGCCAACTGGTTCCCCTCATCCCATGCATCAAGTGTCTCTAATGCTCTTGCTACGTTTTTATATCGAATTAGTACTGAATTGACTTTGGATGCTAGGCTGTTTATTTACTTGCAGTTGTTAAGGCATATTGGTACGTTTGGGGTAAAAATTCCACTCGCTCTTCCTCGGTTCTTCTTCAGTTTCTTGCTTCACTTACAACCTGATATTTTAACTAATCTTGATGCTCCGAGCCCAATCCATGCACCTTATTAT

mRNA sequence

ATGCTTACAATATGGTCTATCAATGGAATTTTGGCTGCATCCTTGAGTTTAAAGTATGTCATTTTACACGAAATTGGAATTGCCAACTGGTTCCCCTCATCCCATGCATCAAGTGTCTCTAATGCTCTTGCTACGTTTTTATATCGAATTAGTACTGAATTGACTTTGGATGCTAGGCTGTTTATTTACTTGCAGTTGTTAAGGCATATTGGTACGTTTGGGGTAAAAATTCCACTCGCTCTTCCTCGGTTCTTCTTCAGTTTCTTGCTTCACTTACAACCTGATATTTTAACTAATCTTGATGCTCCGAGCCCAATCCATGCACCTTATTAT

Coding sequence (CDS)

ATGCTTACAATATGGTCTATCAATGGAATTTTGGCTGCATCCTTGAGTTTAAAGTATGTCATTTTACACGAAATTGGAATTGCCAACTGGTTCCCCTCATCCCATGCATCAAGTGTCTCTAATGCTCTTGCTACGTTTTTATATCGAATTAGTACTGAATTGACTTTGGATGCTAGGCTGTTTATTTACTTGCAGTTGTTAAGGCATATTGGTACGTTTGGGGTAAAAATTCCACTCGCTCTTCCTCGGTTCTTCTTCAGTTTCTTGCTTCACTTACAACCTGATATTTTAACTAATCTTGATGCTCCGAGCCCAATCCATGCACCTTATTAT

Homology

[Close]

BLAST of CSPI01G14880 vs. TrEMBL
Match: E5GCP1_CUCME (Envelope-like protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.7e-27
Identity = 64/107 (59.81%), Postives = 82/107 (76.64%), Query Frame = 1


Query: 2   LTIWSINGILAASLSLKYVILHEIGIANWFPSSHASSVSNALATFLYRISTELTLDARLF 61
           L++W +NGI A + S+KYVILH+IGIANWFPSSHASSVS AL TFLYR+  +  +D   F
Sbjct: 203 LSLWPVNGIHAVAFSVKYVILHKIGIANWFPSSHASSVSAALGTFLYRVCNDNKVDTCAF 262

Query: 62  IYLQLLRHIGTFGVKIPLALPRFFFSFLLHLQPDILTNL-DAPSPIH 108
           IY QLL+H+G+FGVKIP+ALPRFF S LLHL   + +++ D    +H
Sbjct: 263 IYNQLLKHVGSFGVKIPIALPRFFSSLLLHLNATVGSHMPDMDHDVH 309

[Close]

BLAST of CSPI01G14880 vs. TrEMBL
Match: O64406_SOYBN (Envelope-like (Fragment) OS=Glycine max PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-12
Identity = 40/99 (40.40%), Postives = 60/99 (60.61%), Query Frame = 1


Query: 5   WSINGILAAS-LSLKYVILHEIGIANWFPSSHASSVSNALATFLYRISTELTLDARLFIY 64
           W   G L+A  LS+KY ILH IG ANW P++H S+V+  L  FLY + T+   +   +I+
Sbjct: 438 WPKKGKLSAGKLSVKYAILHRIGAANWVPTNHTSTVATGLGKFLYAVGTKSKFNFGKYIF 497

Query: 65  LQLLRHIGTFGVKIPLALPRFFFSFLLHLQPDILTNLDA 103
            Q ++H  +F VK+P+A P      +L   P+IL N+D+
Sbjct: 498 DQTVKHSESFAVKLPIAFPTVLCGIMLSQHPNILNNIDS 536

[Close]

BLAST of CSPI01G14880 vs. TrEMBL
Match: Q84VH9_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-12
Identity = 40/99 (40.40%), Postives = 60/99 (60.61%), Query Frame = 1


Query: 5   WSINGILAAS-LSLKYVILHEIGIANWFPSSHASSVSNALATFLYRISTELTLDARLFIY 64
           W   G L+A  LS+KY ILH IG ANW P++H S+V+  L  FLY + T+   +   +I+
Sbjct: 446 WPKKGKLSAGKLSVKYAILHRIGTANWVPTNHTSTVATGLGKFLYAVGTKSKFNFGNYIF 505

Query: 65  LQLLRHIGTFGVKIPLALPRFFFSFLLHLQPDILTNLDA 103
            Q ++H  +F VK+P+A P      +L   P+IL N+D+
Sbjct: 506 DQTVKHSESFAVKLPIAFPTVLCGIMLSQHPNILNNIDS 544

[Close]

BLAST of CSPI01G14880 vs. TrEMBL
Match: Q84VH5_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.1e-11
Identity = 40/106 (37.74%), Postives = 60/106 (56.60%), Query Frame = 1


Query: 5   WSINGILAAS-LSLKYVILHEIGIANWFPSSHASSVSNALATFLYRISTELTLDARLFIY 64
           W   G L+A  LS+KY ILH IG ANW P++H S+V+  L  FLY + T+   +   +I+
Sbjct: 468 WPKKGKLSAGKLSVKYAILHRIGAANWVPTNHTSTVATGLGKFLYAVGTKSKFNFGNYIF 527

Query: 65  LQLLRHIGTFGVKIPLALPRFFFSFLLHLQPDILTNLDAPSPIHAP 110
            Q ++H  +F VK+P+A P      +L   P+IL   D+     +P
Sbjct: 528 DQTVKHSESFAVKLPIAFPTVLCGIMLSQHPNILNYTDSVMKRESP 573

[Close]

BLAST of CSPI01G14880 vs. TrEMBL
Match: Q84VI1_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 6.0e-11
Identity = 38/106 (35.85%), Postives = 60/106 (56.60%), Query Frame = 1


Query: 5   WSINGILAAS-LSLKYVILHEIGIANWFPSSHASSVSNALATFLYRISTELTLDARLFIY 64
           W   G L+A  LS+KY ILH IG ANW P++H S+V+  L  FLY + T+   +   +I+
Sbjct: 462 WPKKGKLSAGKLSVKYAILHRIGAANWVPTNHTSTVATGLGKFLYAVGTKSKFNFGNYIF 521

Query: 65  LQLLRHIGTFGVKIPLALPRFFFSFLLHLQPDILTNLDAPSPIHAP 110
            Q ++H  +F +K+P+A P      +L   P++L   D+     +P
Sbjct: 522 DQTVKHSESFAIKLPIAFPTVLCGIMLSQHPNMLNYTDSVMKRESP 567

[Close]

BLAST of CSPI01G14880 vs. NCBI nr
Match: gi|659133526|ref|XP_008466770.1| (PREDICTED: uncharacterized protein LOC103504101 [Cucumis melo])

HSP 1 Score: 143.7 bits (361), Expect = 2.0e-31
Identity = 72/105 (68.57%), Postives = 85/105 (80.95%), Query Frame = 1


Query: 1   MLTIWSINGILAASLSLKYVILHEIGIANWFPSSHASSVSNALATFLYRISTELTLDARL 60
           +L+ WS+NGI AA+LS+KY ILH+IGIANWFPSSHASSVS AL TFLYRI  +  +DA  
Sbjct: 90  ILSSWSVNGIPAAALSVKYAILHKIGIANWFPSSHASSVSAALGTFLYRICNDDKVDAGA 149

Query: 61  FIYLQLLRHIGTFGVKIPLALPRFFFSFLLHLQPDILTNLDAPSP 106
           FIY QLLRH+G+FGVK+P+ALPRFF   LLHL   ILT+ DAP P
Sbjct: 150 FIYNQLLRHVGSFGVKLPIALPRFFSGLLLHLNVAILTSSDAPDP 194

[Close]

BLAST of CSPI01G14880 vs. NCBI nr
Match: gi|659124381|ref|XP_008462131.1| (PREDICTED: uncharacterized protein LOC103500560 [Cucumis melo])

HSP 1 Score: 136.3 bits (342), Expect = 3.2e-29
Identity = 68/104 (65.38%), Postives = 80/104 (76.92%), Query Frame = 1


Query: 2   LTIWSINGILAASLSLKYVILHEIGIANWFPSSHASSVSNALATFLYRISTELTLDARLF 61
           L+ W +NGI   +LS+KYVILH+IGIANWFPSSHASSVS AL TFLYRI  +  +DA  F
Sbjct: 303 LSSWPVNGIPVVALSVKYVILHKIGIANWFPSSHASSVSAALDTFLYRICNDDKVDASAF 362

Query: 62  IYLQLLRHIGTFGVKIPLALPRFFFSFLLHLQPDILTNLDAPSP 106
           IY QLLRH+ +FGVK+P+ALPRFF   LLHL   +LT  DAP P
Sbjct: 363 IYNQLLRHVRSFGVKLPIALPRFFSGLLLHLNAAVLTTSDAPGP 406

[Close]

BLAST of CSPI01G14880 vs. NCBI nr
Match: gi|659082086|ref|XP_008441663.1| (PREDICTED: uncharacterized protein LOC103485747 [Cucumis melo])

HSP 1 Score: 132.9 bits (333), Expect = 3.5e-28
Identity = 65/104 (62.50%), Postives = 80/104 (76.92%), Query Frame = 1


Query: 2   LTIWSINGILAASLSLKYVILHEIGIANWFPSSHASSVSNALATFLYRISTELTLDARLF 61
           L+ W +NGI A +LS+KY ILH+IGIANWFPSSHA SV  AL TFLYRI  +  +DA  F
Sbjct: 90  LSSWPVNGIPAVALSVKYAILHKIGIANWFPSSHAYSVFAALDTFLYRICNDDRVDAGAF 149

Query: 62  IYLQLLRHIGTFGVKIPLALPRFFFSFLLHLQPDILTNLDAPSP 106
           IY QLLRH+G+FGVK+P+ALP+FF+  LLHL   +LT  +AP P
Sbjct: 150 IYNQLLRHVGSFGVKLPIALPKFFYGLLLHLNVAVLTTSNAPGP 193

[Close]

BLAST of CSPI01G14880 vs. NCBI nr
Match: gi|659133333|ref|XP_008466681.1| (PREDICTED: uncharacterized protein LOC103504033 [Cucumis melo])

HSP 1 Score: 132.5 bits (332), Expect = 4.6e-28
Identity = 66/104 (63.46%), Postives = 80/104 (76.92%), Query Frame = 1


Query: 2   LTIWSINGILAASLSLKYVILHEIGIANWFPSSHASSVSNALATFLYRISTELTLDARLF 61
           L+ W +NGI AA+LS+KYVILH+IGIANWFPSSHASS+S AL  FLY+I  +  +D   F
Sbjct: 91  LSTWPMNGIPAAALSVKYVILHKIGIANWFPSSHASSISVALGAFLYQICNDDKVDTGAF 150

Query: 62  IYLQLLRHIGTFGVKIPLALPRFFFSFLLHLQPDILTNLDAPSP 106
           IY QLLRH+G+FGVK+P+AL R FFS LLHL   +LT  D P P
Sbjct: 151 IYNQLLRHVGSFGVKVPIALLRLFFSLLLHLNGAVLTASDTPRP 194

[Close]

BLAST of CSPI01G14880 vs. NCBI nr
Match: gi|659129246|ref|XP_008464590.1| (PREDICTED: uncharacterized protein LOC103502436 [Cucumis melo])

HSP 1 Score: 132.5 bits (332), Expect = 4.6e-28
Identity = 66/104 (63.46%), Postives = 80/104 (76.92%), Query Frame = 1


Query: 2   LTIWSINGILAASLSLKYVILHEIGIANWFPSSHASSVSNALATFLYRISTELTLDARLF 61
           L++W ++GI A +LS+ Y ILH+IGIANWFPSSHASSVS AL TFLY I  +  +DA  F
Sbjct: 259 LSLWLVDGIPAIALSVNYAILHKIGIANWFPSSHASSVSTALGTFLYCICNDDRVDAGAF 318

Query: 62  IYLQLLRHIGTFGVKIPLALPRFFFSFLLHLQPDILTNLDAPSP 106
           IY QLLRH+G+FGVK+ +ALPRFF   LLHL   +LT  DAPSP
Sbjct: 319 IYNQLLRHVGSFGVKLSIALPRFFSDLLLHLYAAVLTTSDAPSP 362

The following BLAST results are available for this feature:

BLAST of CSPI01G14880 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI01G14880 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GCP1_CUCME	2.7e-27	59.81	Envelope-like protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
O64406_SOYBN	1.1e-12	40.40	Envelope-like (Fragment) OS=Glycine max PE=4 SV=1	[more]
Q84VH9_SOYBN	1.4e-12	40.40	Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1	[more]
Q84VH5_SOYBN	2.1e-11	37.74	Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1	[more]
Q84VI1_SOYBN	6.0e-11	35.85	Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1	[more]

BLAST of CSPI01G14880 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI01G14880 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659133526\|ref\|XP_008466770.1\|	2.0e-31	68.57	PREDICTED: uncharacterized protein LOC103504101 [Cucumis melo]	[more]
gi\|659124381\|ref\|XP_008462131.1\|	3.2e-29	65.38	PREDICTED: uncharacterized protein LOC103500560 [Cucumis melo]	[more]
gi\|659082086\|ref\|XP_008441663.1\|	3.5e-28	62.50	PREDICTED: uncharacterized protein LOC103485747 [Cucumis melo]	[more]
gi\|659133333\|ref\|XP_008466681.1\|	4.6e-28	63.46	PREDICTED: uncharacterized protein LOC103504033 [Cucumis melo]	[more]
gi\|659129246\|ref\|XP_008464590.1\|	4.6e-28	63.46	PREDICTED: uncharacterized protein LOC103502436 [Cucumis melo]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G14880.1	CSPI01G14880.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G14880	Watermelon (97103) v2	cpiwmbB007
CSPI01G14880	Watermelon (97103) v2	cpiwmbB009
CSPI01G14880	Watermelon (97103) v2	cpiwmbB018
CSPI01G14880	Watermelon (97103) v2	cpiwmbB026
CSPI01G14880	Wax gourd	cpiwgoB049
CSPI01G14880	Wild cucumber (PI 183967)	cpicpiB015
CSPI01G14880	Cucumber (Gy14) v1	cgycpiB358
CSPI01G14880	Cucumber (Gy14) v1	cgycpiB482
CSPI01G14880	Cucurbita maxima (Rimu)	cmacpiB403
CSPI01G14880	Cucurbita moschata (Rifu)	cmocpiB386
CSPI01G14880	Cucurbita moschata (Rifu)	cmocpiB810
CSPI01G14880	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G14880	Melon (DHL92) v3.5.1	cpimeB011
CSPI01G14880	Melon (DHL92) v3.5.1	cpimeB067
CSPI01G14880	Watermelon (Charleston Gray)	cpiwcgB031
CSPI01G14880	Watermelon (Charleston Gray)	cpiwcgB019
CSPI01G14880	Watermelon (97103) v1	cpiwmB008
CSPI01G14880	Watermelon (97103) v1	cpiwmB044
CSPI01G14880	Watermelon (97103) v1	cpiwmB060
CSPI01G14880	Watermelon (97103) v1	cpiwmB070
CSPI01G14880	Cucurbita pepo (Zucchini)	cpecpiB017
CSPI01G14880	Bottle gourd (USVL1VR-Ls)	cpilsiB006
CSPI01G14880	Bottle gourd (USVL1VR-Ls)	cpilsiB020
CSPI01G14880	Bottle gourd (USVL1VR-Ls)	cpilsiB048
CSPI01G14880	Melon (DHL92) v3.6.1	cpimedB011
CSPI01G14880	Melon (DHL92) v3.6.1	cpimedB061
CSPI01G14880	Melon (DHL92) v3.6.1	cpimedB077
CSPI01G14880	Cucumber (Gy14) v2	cgybcpiB001
CSPI01G14880	Silver-seed gourd	carcpiB0000
CSPI01G14880	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G14880	Cucumber (Chinese Long) v3	cpicucB006
CSPI01G14880	Cucumber (Chinese Long) v3	cpicucB030