CSPI01G12990 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G12990
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	50S ribosomal protein L9
Location	Chr1 : 8479344 .. 8487913 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATGTGCAATTTAACCAAATATTGTATGCATATGTGGATATGGTTACATGTACCCCCTACAGATAAGATTGCAGCAAGGGCGATATAAAGAAGAAAGAACTTCAAAGTGGAAGGAGCTTTACAGTGTGTGAAAATTTGAAATGGCTTCTATCACAACCGCTCTGTCGTGGAGTTCTTCCCTTCTGGATATGGGTCTACCAAATGTAGCTGGAAACATCGAAGAAACTGCCAAGTTCTCATATGGAAGGACCGCCATGGTTGTTGTCGCCCAAAAGAAAGCTTCGAAGTCAAGAAAGGTAATGGCCCATAATGGGGTTTCTTCAAATTTCTCCCCAACGCCTTTTTTTTCTGTAGCTGCTTTCGTTTTTCTTTCTTTCTATCTGTTGGGTGTTAGTAGTTCAATTGTAATTTGGTTCTGTGGTGTGTGGAATTGGGGCAGATAATTTTGAAGGAGGATGTTGCGGACCTGGGAAAGAAAGGGCAGCTTATTGATGTGAAGGCTGGGTATTACAGAAACTATCTGTTCCCCATGGGCAAGGCCCAGATTGTCACTCCAGTTTTGCTCAAGTAATGTCTTACAGAACCTATTTAATTTATAGATGTCATTTGTTTTTTTTTTTTTTTTTTATCTATAATATTTCTGGTCTCAAAATTGTACTTTTGGAAATGATCCTACCGAATAAGGGATTTTAAAACGTTTCTATCAATTCTTAAATCTTGGTAATCAGGATGGAATTGTAAGTGTGACCAAATAGTTATTAGTAAGTTGCTGGGTCAGAGTGGTTATTTATTGGTTGTTATCAACTAAATTTGTGTAGCTGGTTAATGGAGTGAGTCTAACGAACTAATTTTCTGCTGTACATAGTCAATGAATGATAATGACAATGAGAGTTTGATGATAAGAAAGCGTGGAAGTTTCATGGTATCAGTCTTTGAGTGATAAGGTTCTGTTTGATATTTTCCTCTCTACTTGGTATTCAAACGAAATACAGGGGACTAGAGTTGGATTACACTGAAACAAAGAAGCAAATACAAACCACAGACAAATTGGAGGGTTGCTCTCTCCACAGTTTGAACTACTGTTCATACATAAAACACAAGACATCTAACCCTGGCCAAGACAAAGGTTTAAATACCAACATTCCCCTGCATACCACAATAGCTACCCAACGCCACCTCTTGTGTACTTGCTTAATGGGAGGTCTAGCAGTCCTCTCTCTATCTCTTTCCCTTTTACTTCCCTGTGATTTAAACCTTAAACAATGCGTGTCATGTCTACTATCTGAAAAATGATCCCTATTCAATTGGACTTTTGGGCAATTTCATCCGTGGAATTATATGATTATCTATGAATTAGGAGAGAACCCCCAAATCCATCTATCGTTACTGAAAACTACCTACCTCATTTTTCCTACCCACTTCATATGCTAGAGACCACAAAAAGAACTTCTAATTTTTAGGATGTTTGAACATCCAAATGATATCGACCAACGCAGCTTTCAAGAGGGTAGACTACTCTGTAAGATTTGTGAAGACAGACTTAGTGTGGAGGGACCATACAACCTTGTCTTTCCTGAAGTCCAACTTTACTGCATTGAGCATTTCAATTTATTAGATGGAAAGAACATTCTTATGAATTTCATTTTTGCTCAATATTGGAGAGCTGATATGTTATGCTTATGAACCAATTGTCTTATTTGAGGTCCATATCTCATGCCTTTCTAGCCCAATCATTTGATAGAGGATGTTAGTAAAATAAATTTTTGGTGCTCAGTCACAGTGGTATCACTATTTGGTTAACTAACTTTGTTGAACTGGTTATTGGAATTTGATGTTCATTGGCACTGTGCTTTAAATATTTCATGTGAATGGCAATATCACTTGACCAAACTATGACAATTCAAACATAAAAGCATGATGATATCTATCAAAAAGTAAAAATACGTTAAACAGTAAAGGGTCGCCTGAAATTAAGTGTGGATCAGAACTGTTGTCTATATGTACATTGGTGGAATTTCTTGGGATTTATTTTTATTTTTCTCAGGGAAATGCGGATTGAAGAGGAAAGAATTGAGGCTGAGAAAAAGCGGGTAACAAATCCTTTTCTTTTATTTCTTTATCTTCCATGCATAGTCTGTCCTTTCCATCTATTTCTTGACCATCATATTCTATCTTCAATAGTATTTTAGAACTATTTGAATCACTAATTACTCAATATAATTTAAATTCTTCACTATAAGCATCAACGACAAGGATTAGCTTTTACTCTTTGACATGATTTGGGCTCCTAGTTTGAAATACCTTTACATATTTTTATTGTACTTTGTTTTTTGGAAGTGAGGCACTTCTATAACAATTTTGGAAAGAACTAAGAAGCATCGGTAAAGTGCTTACTCTGAAAATATTTTACAGATTTTACTACTATCTATAATTTCCAAATGATTGGATGCTCATTTATTGGAACTTTGCGAGTTCGTTGGATTCATTCTGTTCCCTATGCTACAAGTGTCACGCCCTGTTCCGCATACATCCCAAAACAAGAATGTATTACAGTAGGAGACATGATTTAATAAGGTTCCTTCAAACTCAGATTTTACCGCCTAGTACACTTAAGATCTTAACAGTAAAACTTAATCATTTGGCAATAAGAAACAGTATAACGCAGTAGAGATATAGCAAACAACTTCTTTTATTCACTTTAACCATTCAACAATCATAAATTACATCATTCCTTGATACAAAATATAATAACTTAAAACTTAAACATCTCGCCAAGCTTTCTCACCCAACCAAGCATTGTCCCTTCTTACCTGGCCTTTAATGCCTGGTCGCTTGGGGAGAGAGAACATAAAAACATAAGTCAAAAACTTAGTGAGGAAGCTTTTAAAAAAACCTTTGGGAAAAACATTTCATAATAAGATCATTATAGTCAAAACAGGTTCATCGCCTTGTTTCAGAATAACATTATTACAAAACACACATTAGTCTTTTATCCTTCTCGCTGAGAGCATAGTCATTCCCAACACCAAAACTCATCGCCTTGTGTTAAGACTACTTTGATGGCCTTTTCATCATCAGCATCCGGGAATCATCTGGCTCACTCCTCGTTGCTCAGGTGCCTAACACAATACCCATCTTTTATGCATTGGCTGGCTTCACTCCACCATGCAGGTCTTTTCCAAATGGCTGCCTTGAACCCTTGTGTGCACATAAAAGTTTGCTCAATGCTAGACATAAGACTAATGGTTCGAAACACACTTTTACATTCATAAACAACATGAAACTCCTTTAACCATAAGCCTTCTTTAGAAATATTTATGTATAAAACATTATTATACATAAACATTATTATTATACATAGATCAACATGAAATTTAAAGAAAACTTTAAAGTACAAAACACATCTCAAAATCACTCTCTAAGACTTGGTTTCCTTTAGCCCAACGTCTAACTTCAGCTCTTCTTCTTGCCTAGTCACTTACTTGACAGTTCCACACTTAGGCAAAATCTCATAAAATCAACAGACTCTTTAATTTAGCCAGCTTTATTTATACTAATCCAAAACTAGATTAGTCACCTTTGAGCTTCTCCCAAAATGTCAGCTTCTACTTATAACTTTACACGTGTAAGTTTAATATTTTGCTTAACTATGCTTAACCCTTAATCTTACACGTAAACCCATGTCAAATTAGAAATGACATCTTATCGCCTGGCTTCTCTCACGTGGTCTTTCAAAATACCTAACATCTTCTCATCTCACCTCATCCTAACATCGACTTCAAAACTCAAGCTTCTTCTCGAAACGCCTATTCCATACTTTATCAATACTTTGACCCTTCTATTCCAAACACGGGTCTCACAACAAGGGACATTTTTTATATGCATTCTTTTATCTTTTCCTGAACACCAGCAAATCTTAGACTGCATACTTTCATTCTGTAGATAAGATAACATATTATTGTCACTAAATTTCTAAACTGGACTTGGTCATATGCAGAGTAGTTAATTGAATATGGCAACAAATATTTTGTTTTCTTGACTATCACTACCTTTTCTATGGGGATTTATTCAAATGAGAATTAACTTATCAGGTAATAGAGGAGGCACAGCAACTCGCTCTGATTTTTCAAACTGTTGGAGCTTTCAAGGTGAAACGAAAAGGTGGAAAAGGAAAACAGATATTTGGAACGTGAGTTGAATTTTGGCAGTATTAAGATGAAATTTTCTATTTCTTTTCTTTTCATTAGGCCTACTCAATTGCACTTTTTTTTGCAGTGTCACCGCACAGGATCTTGTTGATATTATCAAGGCACAACTTCAGAGGTACTTTATCTATTTACTTTTCTATTTGTATAGAAACCTATTTTAGTTGATGATAGTTCAGAACTTAGGGGAGGGGGTTTGTGGTCCATCAGACGTCAACTACTGGGGAGAGTTGGCCTTTCGAGGTATCTTACCAGACTTTATGAATGGGGAAATGGCATTGTCGAGTATATCAAAACCCCACAAAGATGGAAAGTTGCTTTGCTTATACTAAACTGAAAGCAGTTTGTTTCCGTGCTGGTGTTGTGTAAGATGTTGGGTGGTCGGTAAGTCTGAGTCAGAGTGCTGAACTAGAACAAAGTTATTGTAGCTACCAAGAGGAACCTCCATGAAGACAGTGGAAAATCCTTGAGACACTCCAGGTTTGGACCCAAGACTCCTACCCTATCAACCCTTTTCATCCAAATAGCACTCCTATAATACTCTTCCATGGACACAGTAAGGCTTCTTCCAAGTTGCAATACACAAGGGACAGATTGTTTTAGGTCCTTCACTTTGAAGTTGGAAAACTTGAATTTTCACAAACGCTGGAGAATTAACTTGGTCCCTACCTACAGAGAATGGGTGAGATTCAGAAATATCTCCTAAACTATTGGATGTTGGCTATTTTAAAGATGATTAGCAATGGCTTCTAGGGCTTTTTAGACTATGCAGTTAATTCCTACCTCATTGAATGCTTGGAACTTGCCATCAAGTTATGAGAAAGTATCGTGGTTTCATTTCCAAAGAGGTTAAATAGATAGATAAGGACCAGGTCTTTATGGCCCAAGTAAGTTCCTTCTGGGGCTGCAGTTTGATGATTAAAAAAGAAGTTGCAACACAAGGCTGTTAAGAAGAAATGGATCATGGCATTATGCAGTTTTCGAAAGAAAATTTGGAAAGTCGAGTTCATTCGAGAAAAATTAGTAAAATAGGGTAATTTTTGTCTCTTTGCAAATGTATATTTCAAAGGCATACATTTGATTGAATACGTCTTGGATAAGTGTTCAAAGCCATGCATGTTTGTACAAAATCTTGGACAAATGCTGAAAGAGATGCATTTGGTTTGGAATACATCTTAGAATGTCCAAAATCACGTGTGATCAGTGTGCTTGGCTATAAATATGTTAAACCTCTTAGTTGGGAGGTGGGGACTGGAGGCTAAAGAGGGAAAGTGCTCAAAACCCTAAAAAATTCAAAATATATATCATTGCTCCGGAGCGAGTTCCAAATTGGCTGGTTTCTAAAATTTTCTAAACTGAACCAAATTGAAAATTTCTCCAACCCAGCCGTGTTACTCGAGGGAACTTTATCTTACCCTCTAATTCTAGGCCGGCTAAATCACTTTGTCATGGCAATGACCTAACAAGTCCATGTAAACCTAAATCATATGAGTGAACTACTAGCTCCAAAGATGTCATCTCAATTCTCAGATGCACCCCTACACATGATACACTGCTACAACCCCAAGAAGGAGGAACACCCCACAACGTGGTGCTAGGTGTTAACTTTCCCATGTAAGACTAGCTGAACATAGAGTTGAACATCCTAACCATCCAGTGAAAGAAGCTGGCACATTTTTTGTCTCTCCATGTGCAAAAGGGCTATGAAAACCCGAAAATGTAAGGGAGGTCGCCTGAGGATGGCAAGATAACAAGACAGGCCACAAAATGCAATCTCAAAGCTGACTTGAGTATTGATTTAAGTATTTCAAGTAGTTTGAAATCAGGAGAACAAGGAAGGGCACTCAACTTTCTTTCCTAACTTCTATAATCTTCATTTCAATACAGATAACTATTATTTGGTTCTTCTCAAATTCCCTTCTAAGTTCTAACATGGCTAAAAAATGTTCCCAGTAAAATCTTGAGCTCTGCTGGAAATGTGACAATCAAGCAACAGCCGTCTTGTGCTAGTCAAGCTTGATCTTTTACAAATTTTAAGCGTATACCTTTATGATTAAAGTTTAGAGAATGTTTTTGAGCTGTACCTCAAACTTCAATTTAATCCTTGAATGTTCTCCTCTGATACAAGTATAATACAATTATGTGCAGGGATATTGACAAACGGATTGTTGATCTTCCCGAGATCAGGGAAACAGGAGAATATGTTGCAGAGTTGAAGCTTCACCCTGAAGTTACTGCTCGAGTGAGAGTGAATGTTTTTGCCAACTGAAATTATTTCTAGATAACAAGTTCATGTAGCAGCAACACATTTTTCAAAAGGTAAATGATAACATCATTTTAAGTTCATTTTCATCAAATTCATCTAAACGTTTCAAATATGGTGATCTTTTTTTAAAGTGGACAACTTAGATTTTTTAACCATCTTCTAAGCATTGGATAATGATTCTACATGAAATATATTAGAAATTCAAAGTCGTTCAATCTTCAAAAACT

mRNA sequence

ATGGCTTCTATCACAACCGCTCTGTCGTGGAGTTCTTCCCTTCTGGATATGGGTCTACCAAATGTAGCTGGAAACATCGAAGAAACTGCCAAGTTCTCATATGGAAGGACCGCCATGGTTGTTGTCGCCCAAAAGAAAGCTTCGAAGTCAAGAAAGATAATTTTGAAGGAGGATGTTGCGGACCTGGGAAAGAAAGGGCAGCTTATTGATGTGAAGGCTGGGTATTACAGAAACTATCTGTTCCCCATGGGCAAGGCCCAGATTGTCACTCCAGTTTTGCTCAAGGAAATGCGGATTGAAGAGGAAAGAATTGAGGCTGAGAAAAAGCGGGTAATAGAGGAGGCACAGCAACTCGCTCTGATTTTTCAAACTGTTGGAGCTTTCAAGGTGAAACGAAAAGGTGGAAAAGGAAAACAGATATTTGGAACTGTCACCGCACAGGATCTTGTTGATATTATCAAGGCACAACTTCAGAGGGATATTGACAAACGGATTGTTGATCTTCCCGAGATCAGGGAAACAGGAGAATATGTTGCAGAGTTGAAGCTTCACCCTGAAGTTACTGCTCGAGTGAGAGTGAATGTTTTTGCCAACTGA

Coding sequence (CDS)

ATGGCTTCTATCACAACCGCTCTGTCGTGGAGTTCTTCCCTTCTGGATATGGGTCTACCAAATGTAGCTGGAAACATCGAAGAAACTGCCAAGTTCTCATATGGAAGGACCGCCATGGTTGTTGTCGCCCAAAAGAAAGCTTCGAAGTCAAGAAAGATAATTTTGAAGGAGGATGTTGCGGACCTGGGAAAGAAAGGGCAGCTTATTGATGTGAAGGCTGGGTATTACAGAAACTATCTGTTCCCCATGGGCAAGGCCCAGATTGTCACTCCAGTTTTGCTCAAGGAAATGCGGATTGAAGAGGAAAGAATTGAGGCTGAGAAAAAGCGGGTAATAGAGGAGGCACAGCAACTCGCTCTGATTTTTCAAACTGTTGGAGCTTTCAAGGTGAAACGAAAAGGTGGAAAAGGAAAACAGATATTTGGAACTGTCACCGCACAGGATCTTGTTGATATTATCAAGGCACAACTTCAGAGGGATATTGACAAACGGATTGTTGATCTTCCCGAGATCAGGGAAACAGGAGAATATGTTGCAGAGTTGAAGCTTCACCCTGAAGTTACTGCTCGAGTGAGAGTGAATGTTTTTGCCAACTGA

Homology

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BLAST of CSPI01G12990 vs. Swiss-Prot
Match: RK9_ARATH (50S ribosomal protein L9, chloroplastic OS=Arabidopsis thaliana GN=RPL9 PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 6.6e-70
Identity = 141/199 (70.85%), Postives = 168/199 (84.42%), Query Frame = 1


Query: 1   MASITT-ALSWSSSLLDMGLPNVAGNIEETAKFSYGRTAMVVVAQKKASKSRKIILKEDV 60
           MAS T  +LSWSSS       +  G   ET K S  R    VV+QKKA K RK+ILKEDV
Sbjct: 1   MASSTALSLSWSSS--PCWSHSFNGGANETLKVSERRFNFEVVSQKKAKKLRKVILKEDV 60

Query: 61  ADLGKKGQLIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLA 120
            DLGK+GQL+DVKAG++RN+L P GKAQ++TP+LLKE+++E+ERIEAEK+RV EEAQQLA
Sbjct: 61  TDLGKQGQLLDVKAGFFRNFLLPTGKAQLMTPLLLKELKMEDERIEAEKQRVKEEAQQLA 120

Query: 121 LIFQTVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYVA 180
           ++FQTVGAFKVKRKGGKGK IFG+VTAQDLVDIIK+QLQ+DIDKR+V LPEIRETGEY+A
Sbjct: 121 MVFQTVGAFKVKRKGGKGKLIFGSVTAQDLVDIIKSQLQKDIDKRLVSLPEIRETGEYIA 180

Query: 181 ELKLHPEVTARVRVNVFAN 199
           ELKLHP+VTARV++NVFAN
Sbjct: 181 ELKLHPDVTARVKINVFAN 197

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BLAST of CSPI01G12990 vs. Swiss-Prot
Match: RK9_IPOTF (50S ribosomal protein L9, chloroplastic OS=Ipomoea trifida GN=RPL9 PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.2e-68
Identity = 145/193 (75.13%), Postives = 160/193 (82.90%), Query Frame = 1


Query: 7   ALSWSSSLLDMGLPNVAGNIE-ETAKFSYGRTAMVVVAQKKASKSRKIILKEDVADLGKK 66
           ALSWSSS L +G   ++ N    TAK     +   +V QKK  K RKIILKEDV +LGKK
Sbjct: 8   ALSWSSSSL-LGNYKLSKNAPLGTAKLVERTSNFTIVCQKKTKKIRKIILKEDVQELGKK 67

Query: 67  GQLIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLALIFQTV 126
           GQL++V+AGYYRNYL PMG AQIVTP LLKEM+IEEERIEAEKKRV EEAQQLALIF+TV
Sbjct: 68  GQLMNVRAGYYRNYLLPMGMAQIVTPQLLKEMKIEEERIEAEKKRVKEEAQQLALIFETV 127

Query: 127 GAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYVAELKLHP 186
           G FKVKRKGGKGKQIFG+VTAQDLVDIIKAQLQR++DKRIV LPEIRETG Y AELKLHP
Sbjct: 128 GGFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQREVDKRIVSLPEIRETGAYTAELKLHP 187

Query: 187 EVTARVRVNVFAN 199
           EVTARV+V V AN
Sbjct: 188 EVTARVQVIVSAN 199

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BLAST of CSPI01G12990 vs. Swiss-Prot
Match: RK9_PEA (50S ribosomal protein L9, chloroplastic OS=Pisum sativum GN=RPL9 PE=2 SV=2)

HSP 1 Score: 259.2 bits (661), Expect = 3.6e-68
Identity = 128/176 (72.73%), Postives = 157/176 (89.20%), Query Frame = 1


Query: 23  AGNIEETAKFSYGRTAMVVVAQKKASKSRKIILKEDVADLGKKGQLIDVKAGYYRNYLFP 82
           A N++  ++F    +  +V AQKK  K+RKIILKED+ ++GKKG+L+DV+ G++RN+LFP
Sbjct: 19  AANLKTCSQFPNKSSGFMVFAQKKTKKTRKIILKEDIVNVGKKGELLDVRVGFFRNFLFP 78

Query: 83  MGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLALIFQTVGAFKVKRKGGKGKQIFG 142
            GKAQ+VTP +LKEM+IEEERIEAEK+RV+EEAQQLAL F+T GAFKVKRKGGKGKQIFG
Sbjct: 79  SGKAQLVTPGVLKEMKIEEERIEAEKRRVLEEAQQLALFFETFGAFKVKRKGGKGKQIFG 138

Query: 143 TVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYVAELKLHPEVTARVRVNVFAN 199
           +VTAQDLVDIIKAQLQR++DKRIV+LPEIRETGEY+AELKLHP+VTA+VRVNV AN
Sbjct: 139 SVTAQDLVDIIKAQLQREVDKRIVNLPEIRETGEYIAELKLHPDVTAKVRVNVIAN 194

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BLAST of CSPI01G12990 vs. Swiss-Prot
Match: RK9_WHEAT (50S ribosomal protein L9, chloroplastic OS=Triticum aestivum GN=RPL9 PE=2 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.2e-57
Identity = 116/189 (61.38%), Postives = 152/189 (80.42%), Query Frame = 1


Query: 17  MGLPNVAGNIEETAK-FSYGRT-------AMVVVAQKKASKSRKIILKEDVADL-GKKGQ 76
           M  P+ A  +  TA  FSY R        ++V+VAQ +  K R++ILK+D+ ++ GKKG 
Sbjct: 1   MASPSCASTLPWTAAAFSYPRRLQTRRAPSLVIVAQGRVKKYRQVILKDDIDEISGKKGD 60

Query: 77  LIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLALIFQTVGA 136
            + V+AG+YRN+L P GKA ++TP +LKEM++E+ERIEAEKKRV EEAQQLA +F+T+GA
Sbjct: 61  TMKVRAGFYRNFLLPKGKATLLTPDVLKEMQLEQERIEAEKKRVKEEAQQLARVFETIGA 120

Query: 137 FKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYVAELKLHPEV 196
           FKV RKGGKGKQIFG+VTAQDLVDIIK+QL RD+DKR+V++PEIRE GEYVAE+KLHP+V
Sbjct: 121 FKVPRKGGKGKQIFGSVTAQDLVDIIKSQLNRDVDKRLVEVPEIREVGEYVAEIKLHPDV 180

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BLAST of CSPI01G12990 vs. Swiss-Prot
Match: RL9_CYAP7 (50S ribosomal protein L9 OS=Cyanothece sp. (strain PCC 7424) GN=rplI PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 7.4e-29
Identity = 65/151 (43.05%), Postives = 103/151 (68.21%), Query Frame = 1


Query: 48  SKSRKIILKEDVADLGKKGQLIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAE 107
           +K  +++L ++V  LGK G L++V  GY RNYL P G A I TP +L+++   E+R E E
Sbjct: 2   AKRVQVVLTKNVNKLGKSGDLVEVAPGYARNYLLPQGIANIATPGILRQV---EQRREKE 61

Query: 108 KKRVI---EEAQQLALIFQTVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKR 167
           ++R++   +EA+      QT+G F ++++ G+G+ IFGTVT Q++ D+IK    ++ID+R
Sbjct: 62  RQRLLAERQEAEARKTALQTIGRFVIRKQVGEGEAIFGTVTTQEVADVIKENTSQEIDRR 121

Query: 168 IVDLPEIRETGEYVAELKLHPEVTARVRVNV 196
            + LPEI +TG Y A++KLHPEVTA + + V
Sbjct: 122 GITLPEISKTGFYKAQVKLHPEVTAEIEIQV 149

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BLAST of CSPI01G12990 vs. TrEMBL
Match: A0A0A0LXN8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G095030 PE=3 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.1e-100
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1


Query: 1   MASITTALSWSSSLLDMGLPNVAGNIEETAKFSYGRTAMVVVAQKKASKSRKIILKEDVA 60
           MASITTALSWSSSLLDMGLPNVAGNIEETAKFSYGRTAMVVVAQKKASKSRKIILKEDVA
Sbjct: 1   MASITTALSWSSSLLDMGLPNVAGNIEETAKFSYGRTAMVVVAQKKASKSRKIILKEDVA 60

Query: 61  DLGKKGQLIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLAL 120
           DLGKKGQLIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLAL
Sbjct: 61  DLGKKGQLIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLAL 120

Query: 121 IFQTVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYVAE 180
           IFQTVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYVAE
Sbjct: 121 IFQTVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYVAE 180

Query: 181 LKLHPEVTARVRVNVFAN 199
           LKLHPEVTARVRVNVFAN
Sbjct: 181 LKLHPEVTARVRVNVFAN 198

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BLAST of CSPI01G12990 vs. TrEMBL
Match: F6GW80_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g00770 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 7.3e-76
Identity = 157/198 (79.29%), Postives = 169/198 (85.35%), Query Frame = 1


Query: 1   MASITTALSWSSSLLDMGLPNVAGNIEETAKFSYGRTAMVVVAQKKASKSRKIILKEDVA 60
           MAS   ALSWSSS     L     N  +  KFS  R   VVVAQKKA K RKIILKEDVA
Sbjct: 1   MASTAAALSWSSSTW---LQTSVNNFNQPRKFSDNRMVFVVVAQKKAKKLRKIILKEDVA 60

Query: 61  DLGKKGQLIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLAL 120
           +LGKKGQL+DVKAGYYRNYL PMG AQIVTP+LLKEMR+EEERIEAEKKRV EEAQQ+AL
Sbjct: 61  ELGKKGQLLDVKAGYYRNYLQPMGMAQIVTPLLLKEMRMEEERIEAEKKRVKEEAQQMAL 120

Query: 121 IFQTVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYVAE 180
           +F+TVGAFKVKRKGGKGKQIFG+VTAQDL DIIKAQLQRD+DKRIV LPEIRETGEYVAE
Sbjct: 121 MFETVGAFKVKRKGGKGKQIFGSVTAQDLTDIIKAQLQRDVDKRIVSLPEIRETGEYVAE 180

Query: 181 LKLHPEVTARVRVNVFAN 199
           LKLHPEVTARVR+NV+AN
Sbjct: 181 LKLHPEVTARVRLNVYAN 195

[Close]

BLAST of CSPI01G12990 vs. TrEMBL
Match: A0A067L6A4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05424 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 4.8e-75
Identity = 159/200 (79.50%), Postives = 174/200 (87.00%), Query Frame = 1


Query: 1   MASITTA--LSWSSSLLDMGLPNVAGNIEETAKFSYGRTAMVVVAQKKASKSRKIILKED 60
           MAS +TA  LSWSSS     L + +G I E +K    R  MVV AQKKA K+RKIILKED
Sbjct: 1   MASPSTAATLSWSSS---SWLHSFSGPINEISKLPDKRMPMVVFAQKKAKKTRKIILKED 60

Query: 61  VADLGKKGQLIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQL 120
           VADLGKKGQLIDVKAGYYRN+L PMGKAQIVTP+LLKEM+IEEERIEAEKKRV EEAQQL
Sbjct: 61  VADLGKKGQLIDVKAGYYRNFLLPMGKAQIVTPILLKEMKIEEERIEAEKKRVKEEAQQL 120

Query: 121 ALIFQTVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYV 180
           AL+F+TVGAFKVKRKGGKGK IFG+VTAQD+VDIIKAQLQRD+DKRIV LPEIRETGEY+
Sbjct: 121 ALMFETVGAFKVKRKGGKGKLIFGSVTAQDIVDIIKAQLQRDVDKRIVSLPEIRETGEYI 180

Query: 181 AELKLHPEVTARVRVNVFAN 199
           AELKLHPEVTARVR+NV AN
Sbjct: 181 AELKLHPEVTARVRLNVSAN 197

[Close]

BLAST of CSPI01G12990 vs. TrEMBL
Match: A0A067F2G6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029171mg PE=3 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.1e-74
Identity = 150/197 (76.14%), Postives = 173/197 (87.82%), Query Frame = 1


Query: 2   ASITTALSWSSSLLDMGLPNVAGNIEETAKFSYGRTAMVVVAQKKASKSRKIILKEDVAD 61
           +S    LSWSSS       N    + E+ K    R+A++V+AQKKA K+RKIILKEDVA+
Sbjct: 5   SSTAATLSWSSSSFFQTFGNT---VNESVKLPDKRSALLVLAQKKAKKTRKIILKEDVAE 64

Query: 62  LGKKGQLIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLALI 121
           LGKKGQL+DVKAG+YRNYL PMGKAQIVTP+LLKEM++EEERIEAEKKRV EEAQQLALI
Sbjct: 65  LGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALI 124

Query: 122 FQTVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYVAEL 181
           F+TVGAFKVKRKGGKGKQIFG+VTAQD+VDIIKAQLQRD+DK+IVDLPEIRETGEY+A+L
Sbjct: 125 FETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQL 184

Query: 182 KLHPEVTARVRVNVFAN 199
           KLHPEVTAR+R+NVFAN
Sbjct: 185 KLHPEVTARIRLNVFAN 198

[Close]

BLAST of CSPI01G12990 vs. TrEMBL
Match: V4UEF5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029219mg PE=3 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 3.4e-73
Identity = 148/197 (75.13%), Postives = 171/197 (86.80%), Query Frame = 1


Query: 2   ASITTALSWSSSLLDMGLPNVAGNIEETAKFSYGRTAMVVVAQKKASKSRKIILKEDVAD 61
           +S    LSWSSS       N    + E+ K    R+A++V+AQKKA K+RKIILKEDV +
Sbjct: 34  SSTAATLSWSSSSFFQTFGNT---VNESVKLPDKRSALLVLAQKKAKKTRKIILKEDVGE 93

Query: 62  LGKKGQLIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLALI 121
           LGKKGQL+DVKAG+YRNYL PMGKAQIVTP+LLKEM++EEERIEAEKKRV EEAQQLALI
Sbjct: 94  LGKKGQLLDVKAGFYRNYLHPMGKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALI 153

Query: 122 FQTVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYVAEL 181
           F+TVGAFKVKRKGGKGKQIFG+VTAQD+VDIIKAQLQRD+DK+IV LPEIRETGEY+A+L
Sbjct: 154 FETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVVLPEIRETGEYIAQL 213

Query: 182 KLHPEVTARVRVNVFAN 199
           KLHPEVTAR+R+NVFAN
Sbjct: 214 KLHPEVTARIRLNVFAN 227

[Close]

BLAST of CSPI01G12990 vs. TAIR10
Match: AT3G44890.1 (AT3G44890.1 ribosomal protein L9)

HSP 1 Score: 265.0 bits (676), Expect = 3.7e-71
Identity = 141/199 (70.85%), Postives = 168/199 (84.42%), Query Frame = 1


Query: 1   MASITT-ALSWSSSLLDMGLPNVAGNIEETAKFSYGRTAMVVVAQKKASKSRKIILKEDV 60
           MAS T  +LSWSSS       +  G   ET K S  R    VV+QKKA K RK+ILKEDV
Sbjct: 1   MASSTALSLSWSSS--PCWSHSFNGGANETLKVSERRFNFEVVSQKKAKKLRKVILKEDV 60

Query: 61  ADLGKKGQLIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLA 120
            DLGK+GQL+DVKAG++RN+L P GKAQ++TP+LLKE+++E+ERIEAEK+RV EEAQQLA
Sbjct: 61  TDLGKQGQLLDVKAGFFRNFLLPTGKAQLMTPLLLKELKMEDERIEAEKQRVKEEAQQLA 120

Query: 121 LIFQTVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYVA 180
           ++FQTVGAFKVKRKGGKGK IFG+VTAQDLVDIIK+QLQ+DIDKR+V LPEIRETGEY+A
Sbjct: 121 MVFQTVGAFKVKRKGGKGKLIFGSVTAQDLVDIIKSQLQKDIDKRLVSLPEIRETGEYIA 180

Query: 181 ELKLHPEVTARVRVNVFAN 199
           ELKLHP+VTARV++NVFAN
Sbjct: 181 ELKLHPDVTARVKINVFAN 197

[Close]

BLAST of CSPI01G12990 vs. NCBI nr
Match: gi|449459082|ref|XP_004147275.1| (PREDICTED: 50S ribosomal protein L9, chloroplastic [Cucumis sativus])

HSP 1 Score: 374.0 bits (959), Expect = 1.6e-100
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1


Query: 1   MASITTALSWSSSLLDMGLPNVAGNIEETAKFSYGRTAMVVVAQKKASKSRKIILKEDVA 60
           MASITTALSWSSSLLDMGLPNVAGNIEETAKFSYGRTAMVVVAQKKASKSRKIILKEDVA
Sbjct: 1   MASITTALSWSSSLLDMGLPNVAGNIEETAKFSYGRTAMVVVAQKKASKSRKIILKEDVA 60

Query: 61  DLGKKGQLIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLAL 120
           DLGKKGQLIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLAL
Sbjct: 61  DLGKKGQLIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLAL 120

Query: 121 IFQTVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYVAE 180
           IFQTVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYVAE
Sbjct: 121 IFQTVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYVAE 180

Query: 181 LKLHPEVTARVRVNVFAN 199
           LKLHPEVTARVRVNVFAN
Sbjct: 181 LKLHPEVTARVRVNVFAN 198

[Close]

BLAST of CSPI01G12990 vs. NCBI nr
Match: gi|659072090|ref|XP_008463369.1| (PREDICTED: 50S ribosomal protein L9, chloroplastic [Cucumis melo])

HSP 1 Score: 364.8 bits (935), Expect = 9.8e-98
Identity = 193/198 (97.47%), Postives = 195/198 (98.48%), Query Frame = 1


Query: 1   MASITTALSWSSSLLDMGLPNVAGNIEETAKFSYGRTAMVVVAQKKASKSRKIILKEDVA 60
           MASITTALSWSSSL+DMGLPNVAGNIEETAKFSYGRTAM VVAQKKASKSRKIILKEDV 
Sbjct: 1   MASITTALSWSSSLVDMGLPNVAGNIEETAKFSYGRTAMAVVAQKKASKSRKIILKEDVP 60

Query: 61  DLGKKGQLIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLAL 120
           DLGKKGQLIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLAL
Sbjct: 61  DLGKKGQLIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLAL 120

Query: 121 IFQTVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYVAE 180
           IF+TVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIV LPEIRETGEYVAE
Sbjct: 121 IFETVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVVLPEIRETGEYVAE 180

Query: 181 LKLHPEVTARVRVNVFAN 199
           LKLHPEVTARVRVNVFAN
Sbjct: 181 LKLHPEVTARVRVNVFAN 198

[Close]

BLAST of CSPI01G12990 vs. NCBI nr
Match: gi|1009179471|ref|XP_015871097.1| (PREDICTED: 50S ribosomal protein L9, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 294.3 bits (752), Expect = 1.6e-76
Identity = 156/198 (78.79%), Postives = 174/198 (87.88%), Query Frame = 1


Query: 1   MASITTALSWSSSLLDMGLPNVAGNIEETAKFSYGRTAMVVVAQKKASKSRKIILKEDVA 60
           MAS  + LSWSSS L     +  GN     K S  RTAMV++AQKKA K+R IILKEDVA
Sbjct: 1   MASTASTLSWSSSSL---FQSFGGNANGPTKLSDRRTAMVILAQKKAKKTRTIILKEDVA 60

Query: 61  DLGKKGQLIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLAL 120
           DLGK+GQL++VKAGYYRN+L P+GKAQIVTP+LLKEM+IEEERIEAEKKRV +EAQQLAL
Sbjct: 61  DLGKQGQLLNVKAGYYRNFLHPLGKAQIVTPLLLKEMKIEEERIEAEKKRVKDEAQQLAL 120

Query: 121 IFQTVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYVAE 180
           IF+TVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRD+DKRIV LPEIRETGEY+AE
Sbjct: 121 IFETVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDVDKRIVSLPEIRETGEYIAE 180

Query: 181 LKLHPEVTARVRVNVFAN 199
           LKLHPEVTARVR+NV+AN
Sbjct: 181 LKLHPEVTARVRLNVYAN 195

[Close]

BLAST of CSPI01G12990 vs. NCBI nr
Match: gi|225436446|ref|XP_002274311.1| (PREDICTED: 50S ribosomal protein L9, chloroplastic [Vitis vinifera])

HSP 1 Score: 291.6 bits (745), Expect = 1.1e-75
Identity = 157/198 (79.29%), Postives = 169/198 (85.35%), Query Frame = 1


Query: 1   MASITTALSWSSSLLDMGLPNVAGNIEETAKFSYGRTAMVVVAQKKASKSRKIILKEDVA 60
           MAS   ALSWSSS     L     N  +  KFS  R   VVVAQKKA K RKIILKEDVA
Sbjct: 1   MASTAAALSWSSSTW---LQTSVNNFNQPRKFSDNRMVFVVVAQKKAKKLRKIILKEDVA 60

Query: 61  DLGKKGQLIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLAL 120
           +LGKKGQL+DVKAGYYRNYL PMG AQIVTP+LLKEMR+EEERIEAEKKRV EEAQQ+AL
Sbjct: 61  ELGKKGQLLDVKAGYYRNYLQPMGMAQIVTPLLLKEMRMEEERIEAEKKRVKEEAQQMAL 120

Query: 121 IFQTVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYVAE 180
           +F+TVGAFKVKRKGGKGKQIFG+VTAQDL DIIKAQLQRD+DKRIV LPEIRETGEYVAE
Sbjct: 121 MFETVGAFKVKRKGGKGKQIFGSVTAQDLTDIIKAQLQRDVDKRIVSLPEIRETGEYVAE 180

Query: 181 LKLHPEVTARVRVNVFAN 199
           LKLHPEVTARVR+NV+AN
Sbjct: 181 LKLHPEVTARVRLNVYAN 195

[Close]

BLAST of CSPI01G12990 vs. NCBI nr
Match: gi|1009174613|ref|XP_015868432.1| (PREDICTED: 50S ribosomal protein L9, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 291.6 bits (745), Expect = 1.1e-75
Identity = 153/198 (77.27%), Postives = 174/198 (87.88%), Query Frame = 1


Query: 1   MASITTALSWSSSLLDMGLPNVAGNIEETAKFSYGRTAMVVVAQKKASKSRKIILKEDVA 60
           MAS  + LSW+SS L     +  GN     K S  RT+MV++AQKKA K+R IILKEDVA
Sbjct: 1   MASTASTLSWTSSSL---FQSFGGNANGPTKLSVRRTSMVILAQKKAKKTRTIILKEDVA 60

Query: 61  DLGKKGQLIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLAL 120
           DLGK+GQL++VKAGYYRN+L P+GKAQIVTP+LLKEM+IEEERIEAEKKRV +EA+QLAL
Sbjct: 61  DLGKQGQLLNVKAGYYRNFLHPLGKAQIVTPLLLKEMKIEEERIEAEKKRVKDEAEQLAL 120

Query: 121 IFQTVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYVAE 180
           IF+TVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRD+DKRIV LPEIRETGEY+AE
Sbjct: 121 IFETVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDVDKRIVSLPEIRETGEYIAE 180

Query: 181 LKLHPEVTARVRVNVFAN 199
           LKLHPEVTARVR+NV+AN
Sbjct: 181 LKLHPEVTARVRLNVYAN 195

The following BLAST results are available for this feature:

BLAST of CSPI01G12990 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RK9_ARATH	6.6e-70	70.85	50S ribosomal protein L9, chloroplastic OS=Arabidopsis thaliana GN=RPL9 PE=2 SV=...	[more]
RK9_IPOTF	1.2e-68	75.13	50S ribosomal protein L9, chloroplastic OS=Ipomoea trifida GN=RPL9 PE=3 SV=1	[more]
RK9_PEA	3.6e-68	72.73	50S ribosomal protein L9, chloroplastic OS=Pisum sativum GN=RPL9 PE=2 SV=2	[more]
RK9_WHEAT	2.2e-57	61.38	50S ribosomal protein L9, chloroplastic OS=Triticum aestivum GN=RPL9 PE=2 SV=1	[more]
RL9_CYAP7	7.4e-29	43.05	50S ribosomal protein L9 OS=Cyanothece sp. (strain PCC 7424) GN=rplI PE=3 SV=1	[more]

BLAST of CSPI01G12990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXN8_CUCSA	1.1e-100	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G095030 PE=3 SV=1	[more]
F6GW80_VITVI	7.3e-76	79.29	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g00770 PE=3 SV=...	[more]
A0A067L6A4_JATCU	4.8e-75	79.50	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05424 PE=3 SV=1	[more]
A0A067F2G6_CITSI	1.1e-74	76.14	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029171mg PE=3 SV=1	[more]
V4UEF5_9ROSI	3.4e-73	75.13	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029219mg PE=3 SV=1	[more]

BLAST of CSPI01G12990 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G44890.1	3.7e-71	70.85	ribosomal protein L9	[more]

BLAST of CSPI01G12990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449459082\|ref\|XP_004147275.1\|	1.6e-100	100.00	PREDICTED: 50S ribosomal protein L9, chloroplastic [Cucumis sativus]	[more]
gi\|659072090\|ref\|XP_008463369.1\|	9.8e-98	97.47	PREDICTED: 50S ribosomal protein L9, chloroplastic [Cucumis melo]	[more]
gi\|1009179471\|ref\|XP_015871097.1\|	1.6e-76	78.79	PREDICTED: 50S ribosomal protein L9, chloroplastic-like [Ziziphus jujuba]	[more]
gi\|225436446\|ref\|XP_002274311.1\|	1.1e-75	79.29	PREDICTED: 50S ribosomal protein L9, chloroplastic [Vitis vinifera]	[more]
gi\|1009174613\|ref\|XP_015868432.1\|	1.1e-75	77.27	PREDICTED: 50S ribosomal protein L9, chloroplastic-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000244	Ribosomal_L9
IPR009027	Ribosomal_L9/RNase_H1_N
IPR020069	Ribosomal_L9_C
IPR020070	Ribosomal_L9_N
IPR020594	Ribosomal_L9_bac/chp
IPR000244	Ribosomal_L9
IPR009027	Ribosomal_L9/RNase_H1_N
IPR020069	Ribosomal_L9_C
IPR020070	Ribosomal_L9_N
IPR020594	Ribosomal_L9_bac/chp

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0000311	plastid large ribosomal subunit
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0044435	plastid part
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G12990.2	CSPI01G12990.2	mRNA
CSPI01G12990.1	CSPI01G12990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000244	Ribosomal protein L9	PANTHER	PTHR21368	50S RIBOSOMAL PROTEIN L9	coord: 39..198 score: 8.9
IPR009027	Ribosomal protein L9/RNase H1, N-terminal	unknown	SSF55658	L9 N-domain-like	coord: 52..107 score: 2.09
IPR020069	Ribosomal protein L9, C-terminal	GENE3D	G3DSA:3.10.430.100		coord: 111..198 score: 4.2
IPR020069	Ribosomal protein L9, C-terminal	PFAM	PF03948	Ribosomal_L9_C	coord: 113..195 score: 5.4
IPR020069	Ribosomal protein L9, C-terminal	unknown	SSF55653	Ribosomal protein L9 C-domain	coord: 110..197 score: 4.97
IPR020070	Ribosomal protein L9, N-terminal	GENE3D	G3DSA:3.40.5.10		coord: 52..100 score: 2.9
IPR020070	Ribosomal protein L9, N-terminal	PFAM	PF01281	Ribosomal_L9_N	coord: 52..97 score: 9.1
IPR020070	Ribosomal protein L9, N-terminal	PROSITE	PS00651	RIBOSOMAL_L9	coord: 63..90 scor
IPR020594	Ribosomal protein L9, bacteria/chloroplast	HAMAP	MF_00503	Ribosomal_L9	coord: 51..198 score: 21
IPR020594	Ribosomal protein L9, bacteria/chloroplast	TIGRFAMs	TIGR00158	TIGR00158	coord: 52..197 score: 7.3
None	No IPR available	unknown	Coil	Coil	coord: 94..114 scor
None	No IPR available	PANTHER	PTHR21368:SF18	39S RIBOSOMAL PROTEIN L9, MITOCHONDRIAL	coord: 39..198 score: 8.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G12990	Cla005062	Watermelon (97103) v1	cpiwmB012
CSPI01G12990	Csa1G095030	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G12990	MELO3C004995	Melon (DHL92) v3.5.1	cpimeB011
CSPI01G12990	ClCG03G002460	Watermelon (Charleston Gray)	cpiwcgB040
CSPI01G12990	Lsi02G014540	Bottle gourd (USVL1VR-Ls)	cpilsiB023
CSPI01G12990	MELO3C004995.2	Melon (DHL92) v3.6.1	cpimedB011
CSPI01G12990	CsaV3_1G013140	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G12990	Cla97C03G053510	Watermelon (97103) v2	cpiwmbB034
CSPI01G12990	Bhi08G000245	Wax gourd	cpiwgoB049
CSPI01G12990	Cucsa.207500	Cucumber (Gy14) v1	cgycpiB327
CSPI01G12990	CmaCh13G002010	Cucurbita maxima (Rimu)	cmacpiB205
CSPI01G12990	CmoCh13G002060	Cucurbita moschata (Rifu)	cmocpiB192
CSPI01G12990	CsGy1G013070	Cucumber (Gy14) v2	cgybcpiB001

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G12990	Cucurbita maxima (Rimu)	cmacpiB434
CSPI01G12990	Cucurbita moschata (Rifu)	cmocpiB425
CSPI01G12990	Cucurbita pepo (Zucchini)	cpecpiB518
CSPI01G12990	Cucurbita pepo (Zucchini)	cpecpiB530
CSPI01G12990	Silver-seed gourd	carcpiB0477