CSPI01G07460 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTCACAATCTGTGGATCCAATCATTACCGAACTCTATCTTTTTCTTTCCTTCTTCATCGCCGTTCCCGAGAATTCTCTGTTCCGCGGAGCCTCCAGAAGCGTAGGGCGACTGGTTAAGAAACAAAACGAATTGAACTCATTGTCGTTTCGTAGCGGATCGGATTGTCAATTCCGAGTCCAAACATGAACGAGAAGGCCTCCGTCTCTAAGGAGCTCGAAGCTAAACATACTAAGGTTTTTTTTATTCGCTGTTGCGGTTTGTTTCAAATCGATTCAACTTCGTTTCTTCGTAAAACGTTTCTGTTTCTTGCGTTTGTTGTCGCTAATGATTCTCGTTATAGGTTTATAGCAATGTAATGCTTGTGTTTCGGAATGCTATGATCAACTGTTGAATGTTTTATTTCTTTCATCAAAACTGATTCGAACTGCTAGCGTAATCAAACTAGCTAGAAACTGTGATCGAATTGCGCAGTATTGACGAAGCTCTTCGCATTTTTTTGAAAAGTTATTTAGCATCGAAAACCTTGGTTTACACGGTCAGGAAAGGAATTTCAGTCGTTGATGTAATTGATTTTGTATCAATTGTATTTTCTTCTCGACCTACTTTCTTTCTGCATCGTAAAAGATTGTAATTCTACTTTATTTAACTTGAGATCATTTCTGTGCTTGTTAAATGTTTGTTTACAGATTCTGGAAGGCCTTCTCAAGTTACCGGAAAACAGGGAATGTGCTGACTGCCGGAGCAAGTAAGCATTTAAAAGATCATTATTATGAAATTTTAAATATGAAGTGCTTCCTGTATTTCTAAATTGTTACGTTTGTACTTTCTGTTCTAAAGCTTCTGATCAGCCGATTGTTACGTATGAACTTCCTGTTTTTAAACTTCTGAATGTCTTCTCTGTTTCCGCATCACTTCGGAGAGAATCTTTTGTTGTTCTTTGATTACAGAAAAGAAAAACGGCTATCGTCTGTTTCTTATGTGCAATCAACGCCTTAGTATCATATCATGATAACATCTACTTATCCAATGAATGTGAACATCGACTTCTTGGCAGTATCCTGGTCAAACTGCATCCCTTGGAATGCTAAATGCTCTTTGACTTTTTTTGACTGTTAGTTTGGTGACTTTTCAGGACTGTTAAATGTTAGTTATTTGATGTTCAATTAAAATTTAAACCAGCAAAGAAATATGAAAATATCTAACATGATGCTCCATCAATTTTCGTCAGATTAGTTGGCCGAATAACTTTGTTGTGTATGTTTCTCTTTCCTAGGCAGCACCAAAACAAGGCTGCTAAGCTATAAGATGGTTAGGACTTGGTCGAGAGTTTGCATTTTTAAGGTAGTTGTTGTATAACTAGTTTCAATGTGAGTCCATCTTAGGCAGTCACAATAAGGGAATGGCCCTAATTCTAGCTAAAAAGCTTGGACATGGTAATAATATGGAGCAGGAGAAGAATACTCATCTATATATCACTTTCTGATCAATAGGATACAATGGGACAGACATTTTAAAATAAATTTTGTCCATTGTATAAAATATAAAGATTCATACAGTGGCCAACTATAGGATTTTTTTTAAAAAAGTTTAGCAACATATTAAAGCAAGCATTTAAAACTGCTGTAGTTTAATCATGCTGTTGGAATTTGAAAACCAGGTTTGGAAATGGATTTCGGAGACAAATTGTGCTTTGATAGAACTTTTCTTACTTGATGTGAGTTCAAAATGTACTTTGTATTGTATAGTTAATGTAAACTTTGCTTATGATGCACAGGGCTCCACGGTGGGCAAGTGTAAACCTTGGAATTTTTATATGTATGCAATGCTCGGGTATTCATCGGAGTCTTGGAGTACATATTTCAAAGGTTTCCCTCACTTCTATGTGGTATCCTGTGACTACTAGTAGATTTTTACTTTGAACTTTTCGAGTTTGGCGTGAACAATTTCTTGTAGTTTTGAATAGATTCTTCATGAAAAAATATGAACTTCAAATGATCTTACATTTAAATAATAAAAAAGGAGGCAAGAGTTTTAACCACTCTTTTAAAGATTTTTTGGTTGTTATTTAGAGGAAATCTCCTTGCACGTTCATTTCATTGGAGAACATTTGAGAGGCTCAATGGAACTGAGAATTTATATATGCATATTGCTGATCTGCTAGGCTTGAAAATGAATTTGTTATCTAGTTCCAATTATGATATAATCGGTGTAATTGCCTGCAAACTACTTGGGTCCAAGTCATCTACTGATAAACCCAATAGATCTGTAAAGCATTAGTTTAGCTTGCTCTGTAATCCTTAGGTTGAAATAGAGGTAAAGTTGAACAATATTGAATACACAACTATTTTGTGAACTCACTGCAAATTATGAACTTAGTAAATTGTTTGCATTGCCTCAGCATACGTTCTTGCATTTGCTGTTAAATGTTGTTTGTCCTTAATTAAATTTTGATTTAACTATGTTCTTTCTGAAAGTAGAGACAAAGAACAAACACAAGTTTTATGTGGAAACCCTAGTTTAGGGAGAAAAACCACAATGCAAATATTTCTTATAAAATTAATGATACAAGGGAGCATTAATTTATAGGCAATAGAAGCCTAATTAAATCAATGAAAGATAATTAGGGCAACATGAAAGACTGAAAAACCTTTAGGCTTTCAACATACAACAAGCCCTCTAATTCTAACATGACTAAATTCAGTATTTTCTAAACTCTTATTATGCTGGATCTTCTTTCTGTTTTTCTTTACAGTTGGAAATTTTTATTTTGTGATAGGTACGGTCTACTACTCTTGATACATGGCTACCGGAACAAGTTGCTTTTATGCAGTGTAAGAATATTTGCCATTCGTTAAATTTGTCGTTTCTGTAAGTTAGGATTTTCAATAGACTGTTTTCAATCAAAATCGCTTCCAATTGGATTAATACTTGATCTGCAAAGGAAAATCTCCTGTTCAGAGATCTAATTTCCAACGAATTAAATTTTCTTTTACATCAGCTACTTGAGGTTGATGGTCATTTACATATTATATTTGTAGCTATGGGAAATGAGAGATCAAATTGTTACTGGGAAGCAGAATTACCACCAAATTTTGATAGGAAAGAGAATCAAACGTTCATTCGTGCCAAGTAATTGCTCTGCTTCAATCTAGAACAGTTTCTAAAGAAATTTGGATATGATTTATTCATTTCTATTTATCTAACTTTGTTGAGGAGCTTCCAGGTACGAAGAGAAAAGATGGGTTTCTAGAAACAGAACACATCCAGCTCCACAATTAGGTGGAACGAGTAGTGTTTATTGTGATTCGATTGAAATTGGACCCAGAAGTTCCATTTCAAAGAAGATGAGGAACTTTTCTCTTGAGGAAGAGATTCTCACAAAGCACGTGACAAGAGCAACTCCCACAGTAGCAAAAGCACGCGGGGTAAGTTCATTCTTATCCTGTTGCATAGTATTCTTTATTCCTGTTTTCGTTAAATTGAGATTTTATACCTGGTAGAAAAATTATGTGGAAAGGAGGACACATTGTCTCTTCAGTGAAATTCAATTTTCCAATAAATAACAATCATTGTGTACATATCACCATGTGTTGAGGAGGAAATCACAAACATAGCACAATAAAAGTAGTCAATGATCTATTTTTAAAGACATCAAGCAAATAGCAACACATGAAAAATAATATATTTAGAAAAACACGTCTTAACAATTGACATCTTAACGTGACACATTTGAAAAAGCACACAACATGTTAAAGTTTGTGTACAATAAACTTCCAGGTTTGACAAGAAAAGTTGTACTTGTAGTGTCTTTTATTTTCACCTTGGTTTGGTTTATGGCATGTAATTCTGATTTACTAGAGTCGTGTGAAAGTTATTTTAATCCTTATCATTCATGCAAAATCCCTCTACTCAAGTCTTTCTGTGGCTGATTGATCAGAGAGTTGTCCTTTTCTGTAAATTGCTCTTTCTGATTCTAACCTCTGACCCAAAGCATTATTTCTTTTTCTTTTTCTTTTTCTTTTTCAAGGAGGGAAGTTCTCTTTTTCATTTTAAGTTCCTATATTTGTTCAACTGGTGTGCATCTATGCCTTATGAGGAAAAAAAAAGGTAAATAAAGAAAAATACATAGGTGCATCCTGGGCAACACCTATCTTTGTACATCCCACTAAATTGCCCAATCATAACTTGTTATGTGATCAAGTATTACCTACCTTTTCTTTGAAAATTTTAATATTATTGTTGATGTGAGTAGTGAGTAGTGAGTAGTGAGAAGTGAGAAGGAATGATGGGTGGATGCAGACCCGGAAATTTAAAGCGAATAAAAGAAGTGAGTGGAGAATTATGTTTCTTTTCTGCAGTAGAATTAGTTATTTTTCATTTCTGTTTTCTTAGTGATAACACCAGTCTAGGTTCTCTAATGAATTTCCGTTTTTTTAAAATGGTTTTCGAGTCGTATTAACCTTCAATGTACTTTAGTATTGTCTCATTTCTGCCTTATCTCATAAACAAGAAGCTATAGTTTTAATTGTCTGAACATGGTGGTGCATATTTTTCATGCAGAATTCTTTAGATATGAGGAACCATATGATTACTTCAGCTCCTCCAAGAGGGCCTTCGTTTGTGAAAGAAATTAACCCATCGACAAAAAATACAAATGAATCCCCAGATCTCTTCAAATATGTCCAACATGCAAAACAGGACCGATCTAGTGTAATTCCAGCACGTTGGGCAACTTTCGACTGTAAGTACCCACTCCCAAAGTTCTCGTGA ATGAACGAGAAGGCCTCCGTCTCTAAGGAGCTCGAAGCTAAACATACTAAGATTCTGGAAGGCCTTCTCAAGTTACCGGAAAACAGGGAATGTGCTGACTGCCGGAGCAAGGCTCCACGGTGGGCAAGTGTAAACCTTGGAATTTTTATATGTATGCAATGCTCGGGTATTCATCGGAGTCTTGGAGTACATATTTCAAAGGTACGGTCTACTACTCTTGATACATGGCTACCGGAACAAGTTGCTTTTATGCAGTCTATGGGAAATGAGAGATCAAATTGTTACTGGGAAGCAGAATTACCACCAAATTTTGATAGGAAAGAGAATCAAACGTTCATTCGTGCCAAGTACGAAGAGAAAAGATGGGTTTCTAGAAACAGAACACATCCAGCTCCACAATTAGGTGGAACGAGTAGTGTTTATTGTGATTCGATTGAAATTGGACCCAGAAGTTCCATTTCAAAGAAGATGAGGAACTTTTCTCTTGAGGAAGAGATTCTCACAAAGCACGTGACAAGAGCAACTCCCACAGTAGCAAAAGCACGCGGGAATTCTTTAGATATGAGGAACCATATGATTACTTCAGCTCCTCCAAGAGGGCCTTCGTTTGTGAAAGAAATTAACCCATCGACAAAAAATACAAATGAATCCCCAGATCTCTTCAAATATGTCCAACATGCAAAACAGGACCGATCTAGTGTAATTCCAGCACGTTGGGCAACTTTCGACTGTAAGTACCCACTCCCAAAGTTCTCGTGA ATGAACGAGAAGGCCTCCGTCTCTAAGGAGCTCGAAGCTAAACATACTAAGATTCTGGAAGGCCTTCTCAAGTTACCGGAAAACAGGGAATGTGCTGACTGCCGGAGCAAGGCTCCACGGTGGGCAAGTGTAAACCTTGGAATTTTTATATGTATGCAATGCTCGGGTATTCATCGGAGTCTTGGAGTACATATTTCAAAGGTACGGTCTACTACTCTTGATACATGGCTACCGGAACAAGTTGCTTTTATGCAGTCTATGGGAAATGAGAGATCAAATTGTTACTGGGAAGCAGAATTACCACCAAATTTTGATAGGAAAGAGAATCAAACGTTCATTCGTGCCAAGTACGAAGAGAAAAGATGGGTTTCTAGAAACAGAACACATCCAGCTCCACAATTAGGTGGAACGAGTAGTGTTTATTGTGATTCGATTGAAATTGGACCCAGAAGTTCCATTTCAAAGAAGATGAGGAACTTTTCTCTTGAGGAAGAGATTCTCACAAAGCACGTGACAAGAGCAACTCCCACAGTAGCAAAAGCACGCGGGAATTCTTTAGATATGAGGAACCATATGATTACTTCAGCTCCTCCAAGAGGGCCTTCGTTTGTGAAAGAAATTAACCCATCGACAAAAAATACAAATGAATCCCCAGATCTCTTCAAATATGTCCAACATGCAAAACAGGACCGATCTAGTGTAATTCCAGCACGTTGGGCAACTTTCGACTGTAAGTACCCACTCCCAAAGTTCTCGTGA
BLAST of CSPI01G07460 vs. Swiss-Prot
Match: AGD15_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD15 OS=Arabidopsis thaliana GN=AGD15 PE=2 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 2.4e-69 Identity = 140/245 (57.14%), Postives = 166/245 (67.76%), Query Frame = 1
BLAST of CSPI01G07460 vs. Swiss-Prot
Match: AGD5_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD5 OS=Arabidopsis thaliana GN=AGD5 PE=1 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 2.3e-59 Identity = 129/215 (60.00%), Postives = 144/215 (66.98%), Query Frame = 1
BLAST of CSPI01G07460 vs. Swiss-Prot
Match: SMAP1_MOUSE (Stromal membrane-associated protein 1 OS=Mus musculus GN=Smap1 PE=1 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 7.7e-31 Identity = 61/123 (49.59%), Postives = 87/123 (70.73%), Query Frame = 1
BLAST of CSPI01G07460 vs. Swiss-Prot
Match: SMAP1_HUMAN (Stromal membrane-associated protein 1 OS=Homo sapiens GN=SMAP1 PE=1 SV=2) HSP 1 Score: 132.5 bits (332), Expect = 6.5e-30 Identity = 60/123 (48.78%), Postives = 86/123 (69.92%), Query Frame = 1
BLAST of CSPI01G07460 vs. Swiss-Prot
Match: SMAP2_CHICK (Stromal membrane-associated protein 2 OS=Gallus gallus GN=SMAP2 PE=2 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 4.2e-29 Identity = 59/117 (50.43%), Postives = 84/117 (71.79%), Query Frame = 1
BLAST of CSPI01G07460 vs. TrEMBL
Match: A0A0A0LQZ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043060 PE=4 SV=1) HSP 1 Score: 500.4 bits (1287), Expect = 1.3e-138 Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 1
BLAST of CSPI01G07460 vs. TrEMBL
Match: F6HVT2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0053g00430 PE=4 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 9.6e-81 Identity = 163/250 (65.20%), Postives = 179/250 (71.60%), Query Frame = 1
BLAST of CSPI01G07460 vs. TrEMBL
Match: M5WVB0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010611mg PE=4 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 4.8e-80 Identity = 153/245 (62.45%), Postives = 186/245 (75.92%), Query Frame = 1
BLAST of CSPI01G07460 vs. TrEMBL
Match: A0A068TQP2_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022721001 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 3.2e-76 Identity = 153/247 (61.94%), Postives = 178/247 (72.06%), Query Frame = 1
BLAST of CSPI01G07460 vs. TrEMBL
Match: A0A067E0K8_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g041407mg PE=4 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 3.9e-74 Identity = 145/235 (61.70%), Postives = 169/235 (71.91%), Query Frame = 1
BLAST of CSPI01G07460 vs. TAIR10
Match: AT3G17660.1 (AT3G17660.1 ARF-GAP domain 15) HSP 1 Score: 263.5 bits (672), Expect = 1.4e-70 Identity = 140/245 (57.14%), Postives = 166/245 (67.76%), Query Frame = 1
BLAST of CSPI01G07460 vs. TAIR10
Match: AT5G54310.1 (AT5G54310.1 ARF-GAP domain 5) HSP 1 Score: 230.3 bits (586), Expect = 1.3e-60 Identity = 129/215 (60.00%), Postives = 144/215 (66.98%), Query Frame = 1
BLAST of CSPI01G07460 vs. TAIR10
Match: AT4G05330.1 (AT4G05330.1 ARF-GAP domain 13) HSP 1 Score: 109.8 bits (273), Expect = 2.5e-24 Identity = 60/147 (40.82%), Postives = 84/147 (57.14%), Query Frame = 1
BLAST of CSPI01G07460 vs. TAIR10
Match: AT3G07940.1 (AT3G07940.1 Calcium-dependent ARF-type GTPase activating protein family) HSP 1 Score: 104.0 bits (258), Expect = 1.4e-22 Identity = 61/154 (39.61%), Postives = 82/154 (53.25%), Query Frame = 1
BLAST of CSPI01G07460 vs. TAIR10
Match: AT4G21160.1 (AT4G21160.1 Calcium-dependent ARF-type GTPase activating protein family) HSP 1 Score: 102.8 bits (255), Expect = 3.1e-22 Identity = 49/113 (43.36%), Postives = 71/113 (62.83%), Query Frame = 1
BLAST of CSPI01G07460 vs. NCBI nr
Match: gi|778657482|ref|XP_004137634.2| (PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD15 [Cucumis sativus]) HSP 1 Score: 500.4 bits (1287), Expect = 1.9e-138 Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 1
BLAST of CSPI01G07460 vs. NCBI nr
Match: gi|659066941|ref|XP_008467216.1| (PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD15 isoform X1 [Cucumis melo]) HSP 1 Score: 478.4 bits (1230), Expect = 7.7e-132 Identity = 231/243 (95.06%), Postives = 237/243 (97.53%), Query Frame = 1
BLAST of CSPI01G07460 vs. NCBI nr
Match: gi|659066944|ref|XP_008467226.1| (PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD15 isoform X2 [Cucumis melo]) HSP 1 Score: 368.2 bits (944), Expect = 1.1e-98 Identity = 177/183 (96.72%), Postives = 180/183 (98.36%), Query Frame = 1
BLAST of CSPI01G07460 vs. NCBI nr
Match: gi|1009133590|ref|XP_015883982.1| (PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD15 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 307.8 bits (787), Expect = 1.8e-80 Identity = 157/250 (62.80%), Postives = 184/250 (73.60%), Query Frame = 1
BLAST of CSPI01G07460 vs. NCBI nr
Match: gi|595848434|ref|XP_007209526.1| (hypothetical protein PRUPE_ppa010611mg [Prunus persica]) HSP 1 Score: 305.8 bits (782), Expect = 6.9e-80 Identity = 153/245 (62.45%), Postives = 186/245 (75.92%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |