CSPI01G07170 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G07170
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionEPS15 domain 2 isoform 5
LocationChr1 : 4518618 .. 4520551 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATGCTCGTGTTACTGGAAATGATGCTATACAGTTCTTCTCCATGTCTCATCTTTCTCGCGTCGAGCTCAAACAGGTATCTCATTTGTTTTTCTTTTAGATTATTGAGTTAATAGTTCGATCTAGCTCTGACGCCTCGATGGATAGAGTATTGTGATTTGTCTTAGTTGCGAATATTTTAATTGATGTGAAGTTTAATTTAACTTCGATGTGTTTCGTGGTGAATATCAGTATTCGAAACTTCCTTTATCTGAATGAGAATTCAAGAAATTTGTTTATTTCTTTATTTAGTCAATTATCGTATTTACTCTGATTTGTTTTGTGATCAGAGATTTTCGTTTGGTTTTGTTCTTAAAAAAATTGTGCTTATTGTTTCTCTATCTTTTTTTCGTACTCACGATTGAGAAGTTTTTTAATGGCAAACTTAGGAGTATTTTAACTATATATAGATACACTGGATTTATTGAATTTAGTATATGCCTGTGCTGTCTTTTCCTTTCTTTGTATGACACGGGGTTTACTTATTTGAGTGTATACTATGTATTGGATTCTGTGGTTACATCATTTGCCCTTTTGCCTTTTCTACGATGCCAAGTGAAACTAACGTGATATTTCATATCATGTTTAATGGTTTGGGCTGGTGCAGACTCCAAACGACAGGGATATTTAGGGTTCAACGAGTTCGTTACGGCCATGCAGGTTTTATACTACTTATTTGGATTTTATTACATTAACCAATACGCAGATGTTTTTCTAATTCTAAATATTGTTTTCATTACAACCAGCTAATTTCTTTAGCACAAGCAGGGTATGACCTGGACTCAGATATCCTCAAGAACGCAGGCAAGACATCTTAACAATTCAAAGTTTCTTTGGCTTTTATTCTTGGAGTGTAACTGATTAATTTCTGTTCTGGATCAAGACATCAAATAATTCAGACATCTTATGCCAGAGCCTTTAATTTTATGCCATGTCTGAATTTATCAGTTGTATATTAGATCTATTGATTTATTTTTACTTTATCTTCCTCTAATCCTCGAAATGTGACAGTGCTCTCGTTGTATATAATTCAAGAAGAAACGTAGTCTAAGCAATTTTTTTGTAGACTGCCCAGGTGAGAATATTGAGATTCAGGGACCGTAATTCTTTCTAACCGGTTAATTCATCCTCTAATGGTTGGTTCCTTGATTGACTTTATTGAATGTTATTGAACTAGATTATTTGAAAACTATTAGTGAAAAGTTATAACAGGCAGAATGGATAAAATCTGGTTTGTAGATTGTAAACAGAAAGCGGTTTGTTTGAATTCAAACTTTGTATTCATGTGCTTACATAACACCTTGCAATGCAAAGGCACTACTTGCTTATTGGTCATTATACATTGACACCCTTCTGCTTCCTTACAGCTGGCATGGAGGAAATTAAACTTCCAGTGCCAGAAGGGTTGGACGCTTTAGCTGTTGTAAGTACTCACTCCTTGACAGTGTTGAATTTCCATTGAAATATAGATAAATTAATGTAAGATATCATTTTGCTGATACGCTTTTCAGAAAACTAAGAGATTAGCAATATCTAGTCAACCTGAGACAAATGGTTAGAAAATTACTGATCATTGAATTTCCATAATAAAATTGCCAACTCGGTCTCTGATTTAAATTGATACTCTGCCAATATAGGAACTTTTCAACCTATGCCCCCACCATCGACTCCATGGTTTGCTTCAAAATCTGGGAGCAAGGTATTATGGGTTCTTTTTTCCATTTTTGAGCATTAACTAAAAAAAGTTCTCAAAATTTTGAATTCTAACAAAACTTTGCATTAGCAATGCACCTACAGAGTTGAGATGCTATATAATATTATTATTATATGTATGTATATATTTTACTCATAAGGATTTTTGAAGTTCTTCGGAGACTTTGGGATGTCATAG

mRNA sequence

ATGGAGATGCTCGTGTTACTGGAAATGATGCTATACAGTTCTTCTCCATGTCTCATCTTTCTCGCGTCGAGCTCAAACAGACTCCAAACGACAGGGATATTTAGGGTTCAACGAGTTCGTTACGGCCATGCAGCTGGCATGGAGGAAATTAAACTTCCAGTGCCAGAAGGGTTGGACGCTTTAGCTGTTAAAACTAAGAGATTAGCAATATCTAGTCAACCTGAGACAAATGGAACTTTTCAACCTATGCCCCCACCATCGACTCCATGGTTTGCTTCAAAATCTGGGAGCAAGTTCTTCGGAGACTTTGGGATGTCATAG

Coding sequence (CDS)

ATGGAGATGCTCGTGTTACTGGAAATGATGCTATACAGTTCTTCTCCATGTCTCATCTTTCTCGCGTCGAGCTCAAACAGACTCCAAACGACAGGGATATTTAGGGTTCAACGAGTTCGTTACGGCCATGCAGCTGGCATGGAGGAAATTAAACTTCCAGTGCCAGAAGGGTTGGACGCTTTAGCTGTTAAAACTAAGAGATTAGCAATATCTAGTCAACCTGAGACAAATGGAACTTTTCAACCTATGCCCCCACCATCGACTCCATGGTTTGCTTCAAAATCTGGGAGCAAGTTCTTCGGAGACTTTGGGATGTCATAG
Homology
[Close]
BLAST of CSPI01G07170 vs. TrEMBL
Match: A0A0A0LQH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042770 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.9e-22
Identity = 54/56 (96.43%), Postives = 56/56 (100.00%), Query Frame = 1 

Query: 43 HAAGMEEIKLPVPEGLDALAVKTKRLAISSQPETNGTFQPMPPPSTPWFASKSGSK 99
          +AAGMEEIKLPVPEGLDALAVKTKRLAISSQPETNGTFQPMPPPSTPWFA+KSGSK
Sbjct: 20 NAAGMEEIKLPVPEGLDALAVKTKRLAISSQPETNGTFQPMPPPSTPWFATKSGSK 75

[Close]
BLAST of CSPI01G07170 vs. TrEMBL
Match: A0A059CGI6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01381 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.0e-07
Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 1 

Query: 45  AGMEEIKLPVPEGLDALAVKTKRLAISSQPETNGTFQPMPPPSTPWFASKSGSK 99
           A +E+I  P+ EGLDAL  K+K   +   PETNG+  P+PPPS+ WFASKSG K
Sbjct: 98  ADVEKIDPPMMEGLDALVAKSKNSTVVVDPETNGSAPPVPPPSSQWFASKSGRK 151

[Close]
BLAST of CSPI01G07170 vs. TrEMBL
Match: A0A061GG55_THECC (EPS15 domain 2 isoform 4 OS=Theobroma cacao GN=TCM_030332 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.6e-06
Identity = 34/81 (41.98%), Postives = 44/81 (54.32%), Query Frame = 1 

Query: 18  LIFLASSSNRLQTTGIFRVQRVRYGHAAGMEEIKLPVPEGLDALAVKTKRLAISSQPETN 77
           L+ LA + N L T+ + +        +   E I LP+ EGLDALAVK+K    + +PE N
Sbjct: 79  LVSLAQAGNEL-TSDVLK-------SSVDAENISLPIMEGLDALAVKSKDSTTNGEPEMN 138

Query: 78  GTFQPMPPPSTPWFASKSGSK 99
           GT  P  P S  WF SKS  K
Sbjct: 139 GTTHPQVPTSAKWFTSKSARK 151

[Close]
BLAST of CSPI01G07170 vs. TrEMBL
Match: A0A061GI53_THECC (EPS15 domain 2 isoform 1 OS=Theobroma cacao GN=TCM_030332 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.6e-06
Identity = 34/81 (41.98%), Postives = 44/81 (54.32%), Query Frame = 1 

Query: 18  LIFLASSSNRLQTTGIFRVQRVRYGHAAGMEEIKLPVPEGLDALAVKTKRLAISSQPETN 77
           L+ LA + N L T+ + +        +   E I LP+ EGLDALAVK+K    + +PE N
Sbjct: 79  LVSLAQAGNEL-TSDVLK-------SSVDAENISLPIMEGLDALAVKSKDSTTNGEPEMN 138

Query: 78  GTFQPMPPPSTPWFASKSGSK 99
           GT  P  P S  WF SKS  K
Sbjct: 139 GTTHPQVPTSAKWFTSKSARK 151

[Close]
BLAST of CSPI01G07170 vs. TrEMBL
Match: A0A061GP02_THECC (EPS15 domain 2 isoform 3 OS=Theobroma cacao GN=TCM_030332 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.6e-06
Identity = 34/81 (41.98%), Postives = 44/81 (54.32%), Query Frame = 1 

Query: 18  LIFLASSSNRLQTTGIFRVQRVRYGHAAGMEEIKLPVPEGLDALAVKTKRLAISSQPETN 77
           L+ LA + N L T+ + +        +   E I LP+ EGLDALAVK+K    + +PE N
Sbjct: 79  LVSLAQAGNEL-TSDVLK-------SSVDAENISLPIMEGLDALAVKSKDSTTNGEPEMN 138

Query: 78  GTFQPMPPPSTPWFASKSGSK 99
           GT  P  P S  WF SKS  K
Sbjct: 139 GTTHPQVPTSAKWFTSKSARK 151

[Close]
BLAST of CSPI01G07170 vs. NCBI nr
Match: gi|700209074|gb|KGN64170.1| (hypothetical protein Csa_1G042770 [Cucumis sativus])

HSP 1 Score: 113.2 bits (282), Expect = 2.8e-22
Identity = 54/56 (96.43%), Postives = 56/56 (100.00%), Query Frame = 1 

Query: 43 HAAGMEEIKLPVPEGLDALAVKTKRLAISSQPETNGTFQPMPPPSTPWFASKSGSK 99
          +AAGMEEIKLPVPEGLDALAVKTKRLAISSQPETNGTFQPMPPPSTPWFA+KSGSK
Sbjct: 20 NAAGMEEIKLPVPEGLDALAVKTKRLAISSQPETNGTFQPMPPPSTPWFATKSGSK 75

[Close]
BLAST of CSPI01G07170 vs. NCBI nr
Match: gi|778664443|ref|XP_004145425.2| (PREDICTED: EH domain-containing protein 1 [Cucumis sativus])

HSP 1 Score: 105.1 bits (261), Expect = 7.5e-20
Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 1 

Query: 44  AAGMEEIKLPVPEGLDALAVKTKRLAISSQPETNGTFQPMPPPSTPWFASKSGSK 99
           AAGMEEIKLPV EGLDALAVKTKRLAISSQ ETNGTFQPMPPPSTPWFA+KSGSK
Sbjct: 97  AAGMEEIKLPVLEGLDALAVKTKRLAISSQHETNGTFQPMPPPSTPWFATKSGSK 151

[Close]
BLAST of CSPI01G07170 vs. NCBI nr
Match: gi|659118166|ref|XP_008458980.1| (PREDICTED: EH domain-containing protein 1 [Cucumis melo])

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-19
Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 1 

Query: 44  AAGMEEIKLPVPEGLDALAVKTKRLAISSQPETNGTFQPMPPPSTPWFASKSGSK 99
           AAGMEEIKLPV EGLDALAVK+KRLA+SSQ ETNGTFQPMPPPSTPWFASKSGSK
Sbjct: 97  AAGMEEIKLPVLEGLDALAVKSKRLAVSSQHETNGTFQPMPPPSTPWFASKSGSK 151

[Close]
BLAST of CSPI01G07170 vs. NCBI nr
Match: gi|702322043|ref|XP_010052899.1| (PREDICTED: EH domain-containing protein 1-like isoform X1 [Eucalyptus grandis])

HSP 1 Score: 64.3 bits (155), Expect = 1.5e-07
Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 1 

Query: 45  AGMEEIKLPVPEGLDALAVKTKRLAISSQPETNGTFQPMPPPSTPWFASKSGSK 99
           A +E+I  P+ EGLDAL  K+K   +   PETNG+  P+PPPS+ WFASKSG K
Sbjct: 98  ADVEKIDPPMMEGLDALVAKSKNSTVVVDPETNGSAPPVPPPSSQWFASKSGRK 151

[Close]
BLAST of CSPI01G07170 vs. NCBI nr
Match: gi|702322050|ref|XP_010052900.1| (PREDICTED: EH domain-containing protein 1-like isoform X2 [Eucalyptus grandis])

HSP 1 Score: 64.3 bits (155), Expect = 1.5e-07
Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 1 

Query: 45  AGMEEIKLPVPEGLDALAVKTKRLAISSQPETNGTFQPMPPPSTPWFASKSGSK 99
           A +E+I  P+ EGLDAL  K+K   +   PETNG+  P+PPPS+ WFASKSG K
Sbjct: 98  ADVEKIDPPMMEGLDALVAKSKNSTVVVDPETNGSAPPVPPPSSQWFASKSGRK 151

The following BLAST results are available for this feature:
BLAST of CSPI01G07170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G07170 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQH1_CUCSA1.9e-2296.43Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042770 PE=4 SV=1[more]
A0A059CGI6_EUCGR1.0e-0755.56Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01381 PE=3 SV=1[more]
A0A061GG55_THECC5.6e-0641.98EPS15 domain 2 isoform 4 OS=Theobroma cacao GN=TCM_030332 PE=3 SV=1[more]
A0A061GI53_THECC5.6e-0641.98EPS15 domain 2 isoform 1 OS=Theobroma cacao GN=TCM_030332 PE=3 SV=1[more]
A0A061GP02_THECC5.6e-0641.98EPS15 domain 2 isoform 3 OS=Theobroma cacao GN=TCM_030332 PE=3 SV=1[more]
BLAST of CSPI01G07170 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI01G07170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209074|gb|KGN64170.1|2.8e-2296.43hypothetical protein Csa_1G042770 [Cucumis sativus][more]
gi|778664443|ref|XP_004145425.2|7.5e-2094.55PREDICTED: EH domain-containing protein 1 [Cucumis sativus][more]
gi|659118166|ref|XP_008458980.1|1.3e-1992.73PREDICTED: EH domain-containing protein 1 [Cucumis melo][more]
gi|702322043|ref|XP_010052899.1|1.5e-0755.56PREDICTED: EH domain-containing protein 1-like isoform X1 [Eucalyptus grandis][more]
gi|702322050|ref|XP_010052900.1|1.5e-0755.56PREDICTED: EH domain-containing protein 1-like isoform X2 [Eucalyptus grandis][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0043167 ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G07170.1CSPI01G07170.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G07170Csa1G042770Cucumber (Chinese Long) v2cpicuB000
CSPI01G07170CsGy1G007010Cucumber (Gy14) v2cgybcpiB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G07170Cucurbita moschata (Rifu)cmocpiB049
CSPI01G07170Cucurbita moschata (Rifu)cmocpiB080
CSPI01G07170Cucurbita moschata (Rifu)cmocpiB204
CSPI01G07170Cucurbita moschata (Rifu)cmocpiB383
CSPI01G07170Cucumber (Chinese Long) v2cpicuB003
CSPI01G07170Melon (DHL92) v3.5.1cpimeB024
CSPI01G07170Melon (DHL92) v3.5.1cpimeB058
CSPI01G07170Watermelon (Charleston Gray)cpiwcgB059
CSPI01G07170Watermelon (Charleston Gray)cpiwcgB085
CSPI01G07170Watermelon (97103) v1cpiwmB066
CSPI01G07170Watermelon (97103) v1cpiwmB101
CSPI01G07170Cucurbita pepo (Zucchini)cpecpiB369
CSPI01G07170Cucurbita pepo (Zucchini)cpecpiB505
CSPI01G07170Cucurbita pepo (Zucchini)cpecpiB658
CSPI01G07170Bottle gourd (USVL1VR-Ls)cpilsiB021
CSPI01G07170Bottle gourd (USVL1VR-Ls)cpilsiB072
CSPI01G07170Melon (DHL92) v3.6.1cpimedB023
CSPI01G07170Melon (DHL92) v3.6.1cpimedB052
CSPI01G07170Cucumber (Gy14) v2cgybcpiB003
CSPI01G07170Silver-seed gourdcarcpiB0418
CSPI01G07170Silver-seed gourdcarcpiB0531
CSPI01G07170Silver-seed gourdcarcpiB0629
CSPI01G07170Cucumber (Chinese Long) v3cpicucB001
CSPI01G07170Cucumber (Chinese Long) v3cpicucB002
CSPI01G07170Watermelon (97103) v2cpiwmbB055
CSPI01G07170Watermelon (97103) v2cpiwmbB081
CSPI01G07170Wax gourdcpiwgoB028
CSPI01G07170Wax gourdcpiwgoB096
CSPI01G07170Cucurbita maxima (Rimu)cmacpiB394
CSPI01G07170Wild cucumber (PI 183967)cpicpiB001
CSPI01G07170Cucurbita pepo (Zucchini)cpecpiB025
CSPI01G07170Cucumber (Gy14) v1cgycpiB139
CSPI01G07170Cucumber (Gy14) v1cgycpiB160
CSPI01G07170Cucurbita maxima (Rimu)cmacpiB057
CSPI01G07170Cucurbita maxima (Rimu)cmacpiB087
CSPI01G07170Cucurbita maxima (Rimu)cmacpiB218