CSPI01G04230 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G04230
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	GPI-anchored protein, putative
Location	Chr1 : 2636733 .. 2639210 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTCAAAGTAGCACTTAATAATCCTCACTTTACTTCATATGGTTTTGTTTAATTATCCCTAAAGAATTTAGCCACTCACTCACTCACTCATTGAATTATCTCAAAGTATAAGAGAAGTGTTTGAGATTGCAATTGGCATCCAATTCCTTCATTCCCTCAACTTTGTCAGCCCCATTTTGCCTTTTTCCTTTGTTGGTGTTGTTCTTCATCTTCTTCCTCCCTCCTCCTTTGCTTCCTTTTTTGTTAACCCACAAACCCAAATATCTCATTCCAAACTTCTATTCCTTCACCCATTACCTAACTTTACTCATTCTTCCTCTTTCTCACTACCCCATTTCTTCAATTTCCTCCCCTCATTCTCATTCTCTTCACCAATGTCTTCAATCCCACAAATCTTTCTCCTCTTCTCTCTTCTTTTCTCTCTTTTCCCTTCCTTTTTCTCACTTCCCCATCCCGACCCACTTACAATCCGCCCATTTCAAGTGAACCAGTCCCCACCGGCTACTATTCCGGCGTTCCCAGAACAATCCGATGTTCAGGGCTGCCCATTAGACCTCCCCGACGAGCTTTTCCATGGGATTAAGACGGCTTGTGGTCCTTCAAAAGGGGGTGTCTCCGGGCAGCTCCATCGTAGCCGGTGCTGTCCGGTTTTGGCTGCTTGGCTTTACGCTGCTTACTCAGCCACCGCATTGCAGAGGGCCGGTCGAGGTGGGGTTGTTCCCGGTCACACAGCGCCGTCGTATGACCTACCCTTACTGCCCGATGACTCCGAAACTTGCGTCAGTAACTTGGATCAAGCTTTGAATCAAAGGGGTATTGAGTTAATGAAGCCTAACGAGACTTGTGATGTGGTTTATTGTTATTGTGGGATCAGATTGCATCCTTTGAGCTGCCCTGAAGCGTTTTCACTGAACCAGAATGGTATTCTTGAAGGAAATAGAAATGTGAAGAGATTGGAGAGAAATTGCTTGAGTAGTGGCAATGTCAATGGATTTCCAGGCCTTGGTGGCTGTTCTAAATGCTTGAAAAGTCTTTATCAGGTGAACTTTTTTCCCACATCTCTCTCTCTTTCCCTTCTCCGTACCATTGCATTAAATTGTTTTGTTATGTTTTAAGTGTCATTAAAAGATTGGAAATGTTCTACTTTCCTTTCTGTATCTTAGAGTTATCAGAATATTATAGGAAGATGTGCTAATCTGCTGAACTGCTAGAATTAACCATGATGAGAATTTGTTATTGGGGTTGTTTCTAATTGAAGGAATATCTCAAAGGGAAAACAAAACTATATTTGGAAATGGGCCACTTGGTAGTGACTCTAGTGAAGAACCATGACAAGTTCACAAGTCTATATGAATATGACATGTTGTATTCTCTGTTTGGCTGATGAAAACTGCAGATTATATCATACAATAACATGTGAATTCCTTCGGTGTTGATCAGTCATATTTTTAGTTCAAGTTTATTGTTCTCAATAGTGGAAGAAAATAGCACAAGCTTTCATATTTCTGCTGTAGAATCTTGTTGGGAATGGTTTCACGGTCTACTGCAGTGTTTTGTTTCTTTTAATTTGTTGAAGGAACTTGGAAAGTTCAGTGTCCAATCAACCGTATTGGTTTTATACTTTACATTGTTTAGAGTTTAGATCATTGTTGTTTGATTAGATGTGGCTCCAACAAGTTGGAATGCTATAAACTAATGTACCAAACTTATATGATTATGTATTTGGCAATTGAAACATTAACATAATGCAGCTCAACAAGAAGGAAACTTTGAATTCAAGCAAACCAGAGAACAGGACCACCAAGATGCACCACAAGGAGTGTCAACTAATGGGTCTAACATGGCTTCTTGCCAAGAATCGAACAGCGTATATCCGCACCGTAACATCAGTGCTTCGAGCTAAAATGATGAGCGAAGATGGGTCAGATCCTCGGTCATGTACTCTCAACAGCGACGGGATGCCTTTGGCTGTTGATTCGGCTGAGATGTCTGGCAGTTCTGTTACAATCCCTACTCAGACACTATTGTATCTTGGTCTGTTTTGGGCTGCTTTGATGTACAATCTGATCATGTTGGTTTCTACACTATGAGGTTAGAACAACTTAGAAGTGATTCTGCTTAGAAATTTGTAACTGAGACAATTTTTTTTCTTCTTTTCCTCCCCTTTTTTGTGTAGGTTTCTTGTGCATTGTGATTGTTGTTTGGTATTCATGAGGCTTCAGAAATGATATCTTTTTCTCTGTGTTGATGTGAAAAATGCAAAATTCTTTCCTGATGAGACCTATGGGTAAGCAGCATTTCTGCTTAGGTCCTTGAAATTGGATTTTTTGTGAAAATGGCCAAAGTTTTCCATGTGCAAAGAGGGCCTATTGATTTGTTTTGATAGAGGCCACTGGTGTATAATTTTCTGGCCCTCGTTTGCTATAGATAAGATAAGATAGCATGCATTTTTTTTCTGTCTCTATATAATAAGAAAGG

mRNA sequence

ATGTCTTCAATCCCACAAATCTTTCTCCTCTTCTCTCTTCTTTTCTCTCTTTTCCCTTCCTTTTTCTCACTTCCCCATCCCGACCCACTTACAATCCGCCCATTTCAAGTGAACCAGTCCCCACCGGCTACTATTCCGGCGTTCCCAGAACAATCCGATGTTCAGGGCTGCCCATTAGACCTCCCCGACGAGCTTTTCCATGGGATTAAGACGGCTTGTGGTCCTTCAAAAGGGGGTGTCTCCGGGCAGCTCCATCGTAGCCGGTGCTGTCCGGTTTTGGCTGCTTGGCTTTACGCTGCTTACTCAGCCACCGCATTGCAGAGGGCCGGTCGAGGTGGGGTTGTTCCCGGTCACACAGCGCCGTCGTATGACCTACCCTTACTGCCCGATGACTCCGAAACTTGCGTCAGTAACTTGGATCAAGCTTTGAATCAAAGGGGTATTGAGTTAATGAAGCCTAACGAGACTTGTGATGTGGTTTATTGTTATTGTGGGATCAGATTGCATCCTTTGAGCTGCCCTGAAGCGTTTTCACTGAACCAGAATGGTATTCTTGAAGGAAATAGAAATGTGAAGAGATTGGAGAGAAATTGCTTGAGTAGTGGCAATGTCAATGGATTTCCAGGCCTTGGTGGCTGTTCTAAATGCTTGAAAAGTCTTTATCAGCTCAACAAGAAGGAAACTTTGAATTCAAGCAAACCAGAGAACAGGACCACCAAGATGCACCACAAGGAGTGTCAACTAATGGGTCTAACATGGCTTCTTGCCAAGAATCGAACAGCGTATATCCGCACCGTAACATCAGTGCTTCGAGCTAAAATGATGAGCGAAGATGGGTCAGATCCTCGGTCATGTACTCTCAACAGCGACGGGATGCCTTTGGCTGTTGATTCGGCTGAGATGTCTGGCAGTTCTGTTACAATCCCTACTCAGACACTATTGTATCTTGGTCTGTTTTGGGCTGCTTTGATGTACAATCTGATCATGTTGGTTTCTACACTATGA

Coding sequence (CDS)

ATGTCTTCAATCCCACAAATCTTTCTCCTCTTCTCTCTTCTTTTCTCTCTTTTCCCTTCCTTTTTCTCACTTCCCCATCCCGACCCACTTACAATCCGCCCATTTCAAGTGAACCAGTCCCCACCGGCTACTATTCCGGCGTTCCCAGAACAATCCGATGTTCAGGGCTGCCCATTAGACCTCCCCGACGAGCTTTTCCATGGGATTAAGACGGCTTGTGGTCCTTCAAAAGGGGGTGTCTCCGGGCAGCTCCATCGTAGCCGGTGCTGTCCGGTTTTGGCTGCTTGGCTTTACGCTGCTTACTCAGCCACCGCATTGCAGAGGGCCGGTCGAGGTGGGGTTGTTCCCGGTCACACAGCGCCGTCGTATGACCTACCCTTACTGCCCGATGACTCCGAAACTTGCGTCAGTAACTTGGATCAAGCTTTGAATCAAAGGGGTATTGAGTTAATGAAGCCTAACGAGACTTGTGATGTGGTTTATTGTTATTGTGGGATCAGATTGCATCCTTTGAGCTGCCCTGAAGCGTTTTCACTGAACCAGAATGGTATTCTTGAAGGAAATAGAAATGTGAAGAGATTGGAGAGAAATTGCTTGAGTAGTGGCAATGTCAATGGATTTCCAGGCCTTGGTGGCTGTTCTAAATGCTTGAAAAGTCTTTATCAGCTCAACAAGAAGGAAACTTTGAATTCAAGCAAACCAGAGAACAGGACCACCAAGATGCACCACAAGGAGTGTCAACTAATGGGTCTAACATGGCTTCTTGCCAAGAATCGAACAGCGTATATCCGCACCGTAACATCAGTGCTTCGAGCTAAAATGATGAGCGAAGATGGGTCAGATCCTCGGTCATGTACTCTCAACAGCGACGGGATGCCTTTGGCTGTTGATTCGGCTGAGATGTCTGGCAGTTCTGTTACAATCCCTACTCAGACACTATTGTATCTTGGTCTGTTTTGGGCTGCTTTGATGTACAATCTGATCATGTTGGTTTCTACACTATGA

Homology

[Close]

BLAST of CSPI01G04230 vs. Swiss-Prot
Match: UGPI7_ARATH (Uncharacterized GPI-anchored protein At4g28100 OS=Arabidopsis thaliana GN=At4g28100 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.8e-52
Identity = 131/303 (43.23%), Postives = 172/303 (56.77%), Query Frame = 1


Query: 7   IFLLFSLLFSLFPSFFSLPHPDPLTIRPFQVNQSPPATIPAFPEQSDVQGCPLDLPDELF 66
           I LL SLLFS   S         L + P Q     P T+PAFP ++  Q C LDL +ELF
Sbjct: 9   ILLLCSLLFSTVLS--------NLLVEPVQ-----PNTVPAFPVETQAQSCRLDLSNELF 68

Query: 67  HGIKTACGPSKGGVSGQLHRSRCCPVLAAWLYAAYSATALQRAGRGGVVPGHTAPSYDLP 126
            G+  ACG +       L RSRCCPVLAAWL+AA++ +ALQ        P   +   D P
Sbjct: 69  GGVNEACGRN-------LDRSRCCPVLAAWLFAAHARSALQLPAPA---PTPESSDPDEP 128

Query: 127 LLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLH---PLSCPEAFSLNQNG 186
           + PDDS+ CV+ L  AL  + I++ +PN +CD + C+CGIRLH    LSCP AF+++ +G
Sbjct: 129 MKPDDSQKCVNTLQSALLTKQIKIPQPNSSCDAILCFCGIRLHQISSLSCPAAFNVS-SG 188

Query: 187 ILEGNRN--VKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQLNKKETLNSSKPENRTTKM 246
                    VK LE+ C +S          GC++CL +L +L K    N      R TKM
Sbjct: 189 FKNATPTAAVKNLEKECRNS-------SYSGCTRCLGALQKL-KVRGGNKKTTTERGTKM 248

Query: 247 HHKECQLMGLTWLLAKNRTAYIRTVTSVLRAKMMSEDGSDPRSCTLNSDGMPLAVDSAEM 305
             K+CQLMGLTWLLA+N+TAYI TV++VLRA M S        C+ + + MPLAVDS + 
Sbjct: 249 MSKDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSPHPPHLNKCSPDQENMPLAVDSLQF 279

[Close]

BLAST of CSPI01G04230 vs. TrEMBL
Match: A0A067KY46_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03622 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 1.1e-121
Identity = 226/312 (72.44%), Postives = 257/312 (82.37%), Query Frame = 1


Query: 10  LFSLLFSLFPSFFS-LPHPDPLTIRPFQVNQSPPATIPAFPEQSDVQGCPLDLPDELFHG 69
           LF LLF+ F    S L +PDP TI+PF  N SPP TIPAFPEQS+V GCPLDLPDELFHG
Sbjct: 7   LFPLLFTFFHFLISGLSNPDPETIQPFHPNTSPPTTIPAFPEQSNVAGCPLDLPDELFHG 66

Query: 70  IKTACGPSKGGVSGQLHRSRCCPVLAAWLYAAYSATALQRAGR-GGVVPGHTAPSYDLPL 129
           IKTACG    G +GQLH+SRCCPVLAAW YAAYSATAL  A R    + GHT PSYDLPL
Sbjct: 67  IKTACG---SGSTGQLHKSRCCPVLAAWAYAAYSATALGGAVRVAPAMSGHT-PSYDLPL 126

Query: 130 LPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEG 189
           LPDDSETCV +L +AL ++GIEL+KPNETCDVVYCYCGIRLHPLSCPEAFS+NQ G L G
Sbjct: 127 LPDDSETCVDDLGKALEEKGIELVKPNETCDVVYCYCGIRLHPLSCPEAFSMNQKGQLVG 186

Query: 190 NRNVKRLERNCLSSG-NVNGFPGLGGCSKCLKSLYQLNKKETLNSSKPENRTTKMHHKEC 249
           ++ VKRLER+CLSS  NVN FPGLGGCSKCL SLY LN K+ LNSSK E+RTTKMH+K+C
Sbjct: 187 DKRVKRLERDCLSSSTNVNQFPGLGGCSKCLNSLYLLNNKKALNSSKSEDRTTKMHNKDC 246

Query: 250 QLMGLTWLLAKNRTAYIRTVTSVLRAKMMSEDGSDPRSCTLNSDGMPLAVDSAEMSGSSV 309
           QLMGLTWLLAKNRTAYI TV++VLRA MM+ DGS+PRSCTL+SDGMPLAVDS+E+S  S 
Sbjct: 247 QLMGLTWLLAKNRTAYIHTVSAVLRAMMMNVDGSNPRSCTLSSDGMPLAVDSSEISNDSR 306

Query: 310 TIPTQTLLYLGL 319
           +I  Q  +Y+ +
Sbjct: 307 SITNQAFIYVSV 314

[Close]

BLAST of CSPI01G04230 vs. TrEMBL
Match: A9PH01_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 1.6e-120
Identity = 225/331 (67.98%), Postives = 264/331 (79.76%), Query Frame = 1


Query: 9   LLFSLLFSLFPSFF-SLPHPDPLTIRPFQVNQSPPATIPAFPEQSDVQGCPLDLPDELFH 68
           + F LL +LFP     LP+PD  TI+PF+ N SPPA IPAFPEQS++ GCPLDLP+ELFH
Sbjct: 6   ITFLLLLALFPLLLPGLPNPDTATIQPFKPNPSPPAIIPAFPEQSNLAGCPLDLPNELFH 65

Query: 69  GIKTACGPSKGGVSGQLHRSRCCPVLAAWLYAAYSATALQRAGRGGVVPGHT---APSYD 128
           GI +ACG S    +G LHR+RCCPVLAAWLY+AYSATAL RA R  V+P      +PSYD
Sbjct: 66  GINSACG-SGSSATGHLHRTRCCPVLAAWLYSAYSATALSRANR--VIPATDTGRSPSYD 125

Query: 129 LPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGI 188
           +PLLPDDSETCV  L + L ++GIEL KPNETCDVVYCYCGIRLHPLSCPEAFSLNQNG 
Sbjct: 126 MPLLPDDSETCVDGLSKGLKEKGIELFKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGK 185

Query: 189 LEGNRNVKRLERNCLS-SGNVNGFPGLGGCSKCLKSLYQLNKKETLNSSKPENRTTKMHH 248
           L G++ V++LERNCLS S NVNGFPGLGGCSKCL SLY LN K+ LNSSK E+RTTKMH+
Sbjct: 186 LVGDKRVEKLERNCLSDSNNVNGFPGLGGCSKCLNSLYLLNNKKALNSSKSEDRTTKMHN 245

Query: 249 KECQLMGLTWLLAKNRTAYIRTVTSVLRAKMMSEDGSDPRSCTLNSDGMPLAVDSAEMSG 308
           K+CQLMGLTWLLAKNRTAYI TVT+VLRA MMS DGSDPRSCTL+SDGMPL VDS+E+S 
Sbjct: 246 KDCQLMGLTWLLAKNRTAYIHTVTAVLRAMMMSIDGSDPRSCTLSSDGMPLPVDSSEISN 305

Query: 309 SSVTIPTQTLLYLGLFWAALMYNLIMLVSTL 335
           +S +I  Q  +Y+ +    L+  L ++ S +
Sbjct: 306 NSFSISHQAPIYVTIAVICLLSLLHLVPSAI 333

[Close]

BLAST of CSPI01G04230 vs. TrEMBL
Match: B9IEA3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s04320g PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 3.7e-120
Identity = 224/331 (67.67%), Postives = 264/331 (79.76%), Query Frame = 1


Query: 9   LLFSLLFSLFPSFF-SLPHPDPLTIRPFQVNQSPPATIPAFPEQSDVQGCPLDLPDELFH 68
           + F LL +LFP     LP+PD  TI+PF+ N SPPA IPAFPEQS++ GCPLDLP+ELFH
Sbjct: 6   ITFLLLLALFPLLLPGLPNPDTATIQPFKPNPSPPAIIPAFPEQSNLAGCPLDLPNELFH 65

Query: 69  GIKTACGPSKGGVSGQLHRSRCCPVLAAWLYAAYSATALQRAGRGGVVPGHT---APSYD 128
           GI +ACG S    +G LHR+RCCPVLAAWLY+AYSATAL RA +  V+P      +PSYD
Sbjct: 66  GINSACG-SGSSATGHLHRTRCCPVLAAWLYSAYSATALSRANK--VIPATDTGRSPSYD 125

Query: 129 LPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGI 188
           +PLLPDDSETCV  L + L ++GIEL KPNETCDVVYCYCGIRLHPLSCPEAFSLNQNG 
Sbjct: 126 MPLLPDDSETCVDGLSKGLKEKGIELFKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGK 185

Query: 189 LEGNRNVKRLERNCLS-SGNVNGFPGLGGCSKCLKSLYQLNKKETLNSSKPENRTTKMHH 248
           L G++ V++LERNCLS S NVNGFPGLGGCSKCL SLY LN K+ LNSSK E+RTTKMH+
Sbjct: 186 LVGDKRVEKLERNCLSDSNNVNGFPGLGGCSKCLNSLYLLNNKKALNSSKSEDRTTKMHN 245

Query: 249 KECQLMGLTWLLAKNRTAYIRTVTSVLRAKMMSEDGSDPRSCTLNSDGMPLAVDSAEMSG 308
           K+CQLMGLTWLLAKNRTAYI TVT+VLRA MMS DGSDPRSCTL+SDGMPL VDS+E+S 
Sbjct: 246 KDCQLMGLTWLLAKNRTAYIHTVTAVLRAMMMSIDGSDPRSCTLSSDGMPLPVDSSEISN 305

Query: 309 SSVTIPTQTLLYLGLFWAALMYNLIMLVSTL 335
           +S +I  Q  +Y+ +    L+  L ++ S +
Sbjct: 306 NSFSISHQAPIYVTIAVICLLSLLHLVPSAI 333

[Close]

BLAST of CSPI01G04230 vs. TrEMBL
Match: A0A061FWM2_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_012698 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 4.8e-120
Identity = 228/327 (69.72%), Postives = 265/327 (81.04%), Query Frame = 1


Query: 9   LLFSLLFS-LFPSFFSLPHPDPLTIRPFQVNQSPPATIPAFPEQSDVQGCPLDLPDELFH 68
           L F L F+ L P+ FS+ +PDP   +P  +  SPPATIPAFPEQS+V GCPLDLP+ELFH
Sbjct: 11  LFFYLFFTILLPASFSISNPDPANRQPLPITASPPATIPAFPEQSNVVGCPLDLPEELFH 70

Query: 69  GIKTACGP-SKGGVSGQLHRSRCCPVLAAWLYAAYSATALQRAGRGGVVPGHTAPSYDLP 128
           GIK+ACG  ++ G++GQLHRSRCCPVLA WLYAAYSATAL  AGR         PSYD+P
Sbjct: 71  GIKSACGTKNENGITGQLHRSRCCPVLATWLYAAYSATALSGAGRVVPAVAGRTPSYDMP 130

Query: 129 LLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILE 188
           LLPDDSETCV +L +AL Q+GIEL KPNETCDVVYCYCGIRLHPLSCPEAFS++Q+G L 
Sbjct: 131 LLPDDSETCVDDLGKALRQKGIELAKPNETCDVVYCYCGIRLHPLSCPEAFSVDQSGNLV 190

Query: 189 GNRNVKRLERNCL-SSGNVNGFPGLGGCSKCLKSLYQLNKKETLNSSKPENRTTKMHHKE 248
           G+ NV+RLE+NCL SS NVNGFPGLGGC+KCLKSL+ LNKK TLNSSK E+RTTKM +K+
Sbjct: 191 GDENVERLEKNCLSSSSNVNGFPGLGGCNKCLKSLHLLNKKNTLNSSKSEDRTTKMRNKD 250

Query: 249 CQLMGLTWLLAKNRTAYIRTVTSVLRAKMMSEDGSDPRSCTLNSDGMPLAVDSAEM--SG 308
           CQLMGLTWLLAKNRTAYIRTV++VLRA MMS+ GSDP SCTLNSDGMPLAVDS+E+    
Sbjct: 251 CQLMGLTWLLAKNRTAYIRTVSAVLRAIMMSKAGSDPSSCTLNSDGMPLAVDSSEIYDQS 310

Query: 309 SSVTIPTQTLLYLGLFWAALMYNLIML 331
           SSVT+     L L L    L+ +LI+L
Sbjct: 311 SSVTLYLSQHLSL-LALCLLLIHLIVL 336

[Close]

BLAST of CSPI01G04230 vs. TrEMBL
Match: B9I2G6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s04630g PE=4 SV=2)

HSP 1 Score: 434.9 bits (1117), Expect = 9.0e-119
Identity = 218/330 (66.06%), Postives = 267/330 (80.91%), Query Frame = 1


Query: 9   LLFSLLFSLFPSFFS-LPHPDPLTIRPFQVNQSPPATIPAFPEQSDVQGCPLDLPDELFH 68
           L F LL + FP   + +P+PDP TI+PF+   +PPATIPA PEQS++ GCPL+LP+ELF+
Sbjct: 6   LTFLLLLTCFPLLLAGMPNPDPATIQPFKPGPTPPATIPASPEQSNLAGCPLELPNELFN 65

Query: 69  GIKTACGPSKGGVSGQLHRSRCCPVLAAWLYAAYSATALQRAGRGGVVPGHT---APSYD 128
           GIK+ACG S    SG LHR+RCCPVLAAWLY+AYSATAL RA +  V+P  T   +PSYD
Sbjct: 66  GIKSACG-SGSSASGHLHRTRCCPVLAAWLYSAYSATALSRANK--VIPATTTGRSPSYD 125

Query: 129 LPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGI 188
           +PLLPDDSETCV  L + L ++GIEL+KPNETCDVVYCYCGIRLHPLSCPEAFSLN+ G 
Sbjct: 126 MPLLPDDSETCVDGLSKGLKEKGIELVKPNETCDVVYCYCGIRLHPLSCPEAFSLNRKGK 185

Query: 189 LEGNRNVKRLERNCLS-SGNVNGFPGLGGCSKCLKSLYQLNKKETLNSSKPENRTTKMHH 248
           L G++ VK+LERNCLS S NVNGFPGLGGCSKCL SL+ LN K+TLNSSK ++RT +MH 
Sbjct: 186 LVGDKRVKKLERNCLSNSNNVNGFPGLGGCSKCLNSLHLLNNKKTLNSSKSDDRTARMHS 245

Query: 249 KECQLMGLTWLLAKNRTAYIRTVTSVLRAKMMSEDGSDPRSCTLNSDGMPLAVDSAEMSG 308
           K+CQLMGLTWLLAKNRTAYI TVT+V+RA M+S DG DP+SCTLNSDGMPLAVDS+E+S 
Sbjct: 246 KDCQLMGLTWLLAKNRTAYIHTVTAVIRAMMLSTDGFDPQSCTLNSDGMPLAVDSSEISN 305

Query: 309 SSVTIPTQTLLYLGLFWAALMYNLIMLVST 334
           +S++I  Q  +Y  + +  L+  L+++ ST
Sbjct: 306 NSLSICHQVPIYAAMAFICLLNLLLIVPST 332

[Close]

BLAST of CSPI01G04230 vs. TAIR10
Match: AT3G18050.1 (AT3G18050.1 unknown protein)

HSP 1 Score: 355.1 bits (910), Expect = 4.6e-98
Identity = 191/332 (57.53%), Postives = 226/332 (68.07%), Query Frame = 1


Query: 12  SLLFSLFPSFFSLPHPDPLTIRPFQVNQSPPATIPAFPEQSDVQGCPLDLPDELFHGIKT 71
           SL+     +  S   P+P+T++PF+V  SPPATIPAFPEQSD  GCPLDLP++LFHGIK+
Sbjct: 10  SLIIIFLFTILSPVSPEPVTVQPFRVKSSPPATIPAFPEQSDFSGCPLDLPEDLFHGIKS 69

Query: 72  ACGPSKGGVSGQLHRSRCCPVLAAWLYAAYSATALQRA------GRGGVVPGHTAPSYDL 131
           AC   K      LH+ +CCPVL AWLY+AYS TAL R+               T P  D+
Sbjct: 70  ACSGKK------LHKGKCCPVLGAWLYSAYSTTALSRSISAAARNSSSSSAAVTTPEEDM 129

Query: 132 PLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGIL 191
           PLLPDDSETCV  L ++L QRGIEL +PNETCDVVYCYCGIRLHPLSC EAF +N  G L
Sbjct: 130 PLLPDDSETCVDGLGKSLRQRGIELTRPNETCDVVYCYCGIRLHPLSCSEAFRVNDEGRL 189

Query: 192 EGNRNVKRLERNCLSS--GNVNGFPGLGGCSKCLKSLYQLNKKETLNSSKP----ENRTT 251
            G+  V RLE +CLS    N +GF  L GC+KCL SLY+LN K+T  +  P     NRT 
Sbjct: 190 VGDERVDRLETDCLSGSHNNADGFSPLLGCNKCLNSLYKLNPKKTSGTRNPSKEDRNRTA 249

Query: 252 KMHHKECQLMGLTWLLAKNRTAYIRTVTSVLRAKMMSEDGSDPRSCTLNSDGMPLAVDSA 311
           KMH+K+C LMGLTWLLAKNRTAY  TVTSVLRA M++ DG  PRSC L SDGMPLAVDS+
Sbjct: 250 KMHNKDCVLMGLTWLLAKNRTAYFPTVTSVLRAVMLNHDGV-PRSCALGSDGMPLAVDSS 309

Query: 312 EMSGSSVTIPTQTLLYLGLFWAALMYNLIMLV 332
           E S  S T    +L Y       L+Y++I LV
Sbjct: 310 EFSNGSPT----SLQYPHHLVHFLLYSVITLV 330

[Close]

BLAST of CSPI01G04230 vs. TAIR10
Match: AT4G28100.1 (AT4G28100.1 unknown protein)

HSP 1 Score: 207.2 bits (526), Expect = 1.5e-53
Identity = 131/303 (43.23%), Postives = 172/303 (56.77%), Query Frame = 1


Query: 7   IFLLFSLLFSLFPSFFSLPHPDPLTIRPFQVNQSPPATIPAFPEQSDVQGCPLDLPDELF 66
           I LL SLLFS   S         L + P Q     P T+PAFP ++  Q C LDL +ELF
Sbjct: 9   ILLLCSLLFSTVLS--------NLLVEPVQ-----PNTVPAFPVETQAQSCRLDLSNELF 68

Query: 67  HGIKTACGPSKGGVSGQLHRSRCCPVLAAWLYAAYSATALQRAGRGGVVPGHTAPSYDLP 126
            G+  ACG +       L RSRCCPVLAAWL+AA++ +ALQ        P   +   D P
Sbjct: 69  GGVNEACGRN-------LDRSRCCPVLAAWLFAAHARSALQLPAPA---PTPESSDPDEP 128

Query: 127 LLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLH---PLSCPEAFSLNQNG 186
           + PDDS+ CV+ L  AL  + I++ +PN +CD + C+CGIRLH    LSCP AF+++ +G
Sbjct: 129 MKPDDSQKCVNTLQSALLTKQIKIPQPNSSCDAILCFCGIRLHQISSLSCPAAFNVS-SG 188

Query: 187 ILEGNRN--VKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQLNKKETLNSSKPENRTTKM 246
                    VK LE+ C +S          GC++CL +L +L K    N      R TKM
Sbjct: 189 FKNATPTAAVKNLEKECRNS-------SYSGCTRCLGALQKL-KVRGGNKKTTTERGTKM 248

Query: 247 HHKECQLMGLTWLLAKNRTAYIRTVTSVLRAKMMSEDGSDPRSCTLNSDGMPLAVDSAEM 305
             K+CQLMGLTWLLA+N+TAYI TV++VLRA M S        C+ + + MPLAVDS + 
Sbjct: 249 MSKDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSPHPPHLNKCSPDQENMPLAVDSLQF 279

[Close]

BLAST of CSPI01G04230 vs. NCBI nr
Match: gi|778656457|ref|XP_011649105.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized GPI-anchored protein At4g28100 [Cucumis sativus])

HSP 1 Score: 677.6 bits (1747), Expect = 1.1e-191
Identity = 333/334 (99.70%), Postives = 333/334 (99.70%), Query Frame = 1


Query: 1   MSSIPQIFLLFSLLFSLFPSFFSLPHPDPLTIRPFQVNQSPPATIPAFPEQSDVQGCPLD 60
           MSSIPQIFLLFSLLFSLFPSFFSLPHPDPLTIRPFQVNQSPPATIPAFP QSDVQGCPLD
Sbjct: 1   MSSIPQIFLLFSLLFSLFPSFFSLPHPDPLTIRPFQVNQSPPATIPAFPXQSDVQGCPLD 60

Query: 61  LPDELFHGIKTACGPSKGGVSGQLHRSRCCPVLAAWLYAAYSATALQRAGRGGVVPGHTA 120
           LPDELFHGIKTACGPSKGGVSGQLHRSRCCPVLAAWLYAAYSATALQRAGRGGVVPGHTA
Sbjct: 61  LPDELFHGIKTACGPSKGGVSGQLHRSRCCPVLAAWLYAAYSATALQRAGRGGVVPGHTA 120

Query: 121 PSYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLN 180
           PSYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLN
Sbjct: 121 PSYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLN 180

Query: 181 QNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQLNKKETLNSSKPENRTTK 240
           QNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQLNKKETLNSSKPENRTTK
Sbjct: 181 QNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQLNKKETLNSSKPENRTTK 240

Query: 241 MHHKECQLMGLTWLLAKNRTAYIRTVTSVLRAKMMSEDGSDPRSCTLNSDGMPLAVDSAE 300
           MHHKECQLMGLTWLLAKNRTAYIRTVTSVLRAKMMSEDGSDPRSCTLNSDGMPLAVDSAE
Sbjct: 241 MHHKECQLMGLTWLLAKNRTAYIRTVTSVLRAKMMSEDGSDPRSCTLNSDGMPLAVDSAE 300

Query: 301 MSGSSVTIPTQTLLYLGLFWAALMYNLIMLVSTL 335
           MSGSSVTIPTQTLLYLGLFWAALMYNLIMLVSTL
Sbjct: 301 MSGSSVTIPTQTLLYLGLFWAALMYNLIMLVSTL 334

[Close]

BLAST of CSPI01G04230 vs. NCBI nr
Match: gi|659106915|ref|XP_008453468.1| (PREDICTED: uncharacterized GPI-anchored protein At4g28100 [Cucumis melo])

HSP 1 Score: 659.1 bits (1699), Expect = 4.2e-186
Identity = 322/334 (96.41%), Postives = 327/334 (97.90%), Query Frame = 1


Query: 1   MSSIPQIFLLFSLLFSLFPSFFSLPHPDPLTIRPFQVNQSPPATIPAFPEQSDVQGCPLD 60
           MSSIPQIFL+FSL+FSLFPSFFSLPHPDPLTIRP QVNQSPPATIPAFPEQSDVQGCPLD
Sbjct: 1   MSSIPQIFLIFSLVFSLFPSFFSLPHPDPLTIRPLQVNQSPPATIPAFPEQSDVQGCPLD 60

Query: 61  LPDELFHGIKTACGPSKGGVSGQLHRSRCCPVLAAWLYAAYSATALQRAGRGGVVPGHTA 120
           LPDELFHGIKTACGPSKGG+SGQLHRSRCCPVLAAWLYAAYSATALQRAGRGGVVPGHTA
Sbjct: 61  LPDELFHGIKTACGPSKGGISGQLHRSRCCPVLAAWLYAAYSATALQRAGRGGVVPGHTA 120

Query: 121 PSYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLN 180
           PSYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLN
Sbjct: 121 PSYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLN 180

Query: 181 QNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQLNKKETLNSSKPENRTTK 240
           QNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQLN KETLNSSKPENRTTK
Sbjct: 181 QNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTTK 240

Query: 241 MHHKECQLMGLTWLLAKNRTAYIRTVTSVLRAKMMSEDGSDPRSCTLNSDGMPLAVDSAE 300
           MHHKECQLMGLTWLLAKNRTAYIRTVTSVLRAKMM +DGSDPRSCTLNSDGMPLAVDSAE
Sbjct: 241 MHHKECQLMGLTWLLAKNRTAYIRTVTSVLRAKMMRKDGSDPRSCTLNSDGMPLAVDSAE 300

Query: 301 MSGSSVTIPTQTLLYLGLFWAALMYNLIMLVSTL 335
           +S SSV IPT TLLYLGL WAALMYNLIMLVSTL
Sbjct: 301 ISSSSVPIPTHTLLYLGLVWAALMYNLIMLVSTL 334

[Close]

BLAST of CSPI01G04230 vs. NCBI nr
Match: gi|802573686|ref|XP_012068434.1| (PREDICTED: uncharacterized GPI-anchored protein At4g28100 [Jatropha curcas])

HSP 1 Score: 444.5 bits (1142), Expect = 1.6e-121
Identity = 226/312 (72.44%), Postives = 257/312 (82.37%), Query Frame = 1


Query: 10  LFSLLFSLFPSFFS-LPHPDPLTIRPFQVNQSPPATIPAFPEQSDVQGCPLDLPDELFHG 69
           LF LLF+ F    S L +PDP TI+PF  N SPP TIPAFPEQS+V GCPLDLPDELFHG
Sbjct: 7   LFPLLFTFFHFLISGLSNPDPETIQPFHPNTSPPTTIPAFPEQSNVAGCPLDLPDELFHG 66

Query: 70  IKTACGPSKGGVSGQLHRSRCCPVLAAWLYAAYSATALQRAGR-GGVVPGHTAPSYDLPL 129
           IKTACG    G +GQLH+SRCCPVLAAW YAAYSATAL  A R    + GHT PSYDLPL
Sbjct: 67  IKTACG---SGSTGQLHKSRCCPVLAAWAYAAYSATALGGAVRVAPAMSGHT-PSYDLPL 126

Query: 130 LPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEG 189
           LPDDSETCV +L +AL ++GIEL+KPNETCDVVYCYCGIRLHPLSCPEAFS+NQ G L G
Sbjct: 127 LPDDSETCVDDLGKALEEKGIELVKPNETCDVVYCYCGIRLHPLSCPEAFSMNQKGQLVG 186

Query: 190 NRNVKRLERNCLSSG-NVNGFPGLGGCSKCLKSLYQLNKKETLNSSKPENRTTKMHHKEC 249
           ++ VKRLER+CLSS  NVN FPGLGGCSKCL SLY LN K+ LNSSK E+RTTKMH+K+C
Sbjct: 187 DKRVKRLERDCLSSSTNVNQFPGLGGCSKCLNSLYLLNNKKALNSSKSEDRTTKMHNKDC 246

Query: 250 QLMGLTWLLAKNRTAYIRTVTSVLRAKMMSEDGSDPRSCTLNSDGMPLAVDSAEMSGSSV 309
           QLMGLTWLLAKNRTAYI TV++VLRA MM+ DGS+PRSCTL+SDGMPLAVDS+E+S  S 
Sbjct: 247 QLMGLTWLLAKNRTAYIHTVSAVLRAMMMNVDGSNPRSCTLSSDGMPLAVDSSEISNDSR 306

Query: 310 TIPTQTLLYLGL 319
           +I  Q  +Y+ +
Sbjct: 307 SITNQAFIYVSV 314

[Close]

BLAST of CSPI01G04230 vs. NCBI nr
Match: gi|118487658|gb|ABK95654.1| (unknown [Populus trichocarpa])

HSP 1 Score: 440.7 bits (1132), Expect = 2.4e-120
Identity = 225/331 (67.98%), Postives = 264/331 (79.76%), Query Frame = 1


Query: 9   LLFSLLFSLFPSFF-SLPHPDPLTIRPFQVNQSPPATIPAFPEQSDVQGCPLDLPDELFH 68
           + F LL +LFP     LP+PD  TI+PF+ N SPPA IPAFPEQS++ GCPLDLP+ELFH
Sbjct: 6   ITFLLLLALFPLLLPGLPNPDTATIQPFKPNPSPPAIIPAFPEQSNLAGCPLDLPNELFH 65

Query: 69  GIKTACGPSKGGVSGQLHRSRCCPVLAAWLYAAYSATALQRAGRGGVVPGHT---APSYD 128
           GI +ACG S    +G LHR+RCCPVLAAWLY+AYSATAL RA R  V+P      +PSYD
Sbjct: 66  GINSACG-SGSSATGHLHRTRCCPVLAAWLYSAYSATALSRANR--VIPATDTGRSPSYD 125

Query: 129 LPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGI 188
           +PLLPDDSETCV  L + L ++GIEL KPNETCDVVYCYCGIRLHPLSCPEAFSLNQNG 
Sbjct: 126 MPLLPDDSETCVDGLSKGLKEKGIELFKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGK 185

Query: 189 LEGNRNVKRLERNCLS-SGNVNGFPGLGGCSKCLKSLYQLNKKETLNSSKPENRTTKMHH 248
           L G++ V++LERNCLS S NVNGFPGLGGCSKCL SLY LN K+ LNSSK E+RTTKMH+
Sbjct: 186 LVGDKRVEKLERNCLSDSNNVNGFPGLGGCSKCLNSLYLLNNKKALNSSKSEDRTTKMHN 245

Query: 249 KECQLMGLTWLLAKNRTAYIRTVTSVLRAKMMSEDGSDPRSCTLNSDGMPLAVDSAEMSG 308
           K+CQLMGLTWLLAKNRTAYI TVT+VLRA MMS DGSDPRSCTL+SDGMPL VDS+E+S 
Sbjct: 246 KDCQLMGLTWLLAKNRTAYIHTVTAVLRAMMMSIDGSDPRSCTLSSDGMPLPVDSSEISN 305

Query: 309 SSVTIPTQTLLYLGLFWAALMYNLIMLVSTL 335
           +S +I  Q  +Y+ +    L+  L ++ S +
Sbjct: 306 NSFSISHQAPIYVTIAVICLLSLLHLVPSAI 333

[Close]

BLAST of CSPI01G04230 vs. NCBI nr
Match: gi|224135505|ref|XP_002322090.1| (hypothetical protein POPTR_0015s04320g [Populus trichocarpa])

HSP 1 Score: 439.5 bits (1129), Expect = 5.3e-120
Identity = 224/331 (67.67%), Postives = 264/331 (79.76%), Query Frame = 1


Query: 9   LLFSLLFSLFPSFF-SLPHPDPLTIRPFQVNQSPPATIPAFPEQSDVQGCPLDLPDELFH 68
           + F LL +LFP     LP+PD  TI+PF+ N SPPA IPAFPEQS++ GCPLDLP+ELFH
Sbjct: 6   ITFLLLLALFPLLLPGLPNPDTATIQPFKPNPSPPAIIPAFPEQSNLAGCPLDLPNELFH 65

Query: 69  GIKTACGPSKGGVSGQLHRSRCCPVLAAWLYAAYSATALQRAGRGGVVPGHT---APSYD 128
           GI +ACG S    +G LHR+RCCPVLAAWLY+AYSATAL RA +  V+P      +PSYD
Sbjct: 66  GINSACG-SGSSATGHLHRTRCCPVLAAWLYSAYSATALSRANK--VIPATDTGRSPSYD 125

Query: 129 LPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGI 188
           +PLLPDDSETCV  L + L ++GIEL KPNETCDVVYCYCGIRLHPLSCPEAFSLNQNG 
Sbjct: 126 MPLLPDDSETCVDGLSKGLKEKGIELFKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGK 185

Query: 189 LEGNRNVKRLERNCLS-SGNVNGFPGLGGCSKCLKSLYQLNKKETLNSSKPENRTTKMHH 248
           L G++ V++LERNCLS S NVNGFPGLGGCSKCL SLY LN K+ LNSSK E+RTTKMH+
Sbjct: 186 LVGDKRVEKLERNCLSDSNNVNGFPGLGGCSKCLNSLYLLNNKKALNSSKSEDRTTKMHN 245

Query: 249 KECQLMGLTWLLAKNRTAYIRTVTSVLRAKMMSEDGSDPRSCTLNSDGMPLAVDSAEMSG 308
           K+CQLMGLTWLLAKNRTAYI TVT+VLRA MMS DGSDPRSCTL+SDGMPL VDS+E+S 
Sbjct: 246 KDCQLMGLTWLLAKNRTAYIHTVTAVLRAMMMSIDGSDPRSCTLSSDGMPLPVDSSEISN 305

Query: 309 SSVTIPTQTLLYLGLFWAALMYNLIMLVSTL 335
           +S +I  Q  +Y+ +    L+  L ++ S +
Sbjct: 306 NSFSISHQAPIYVTIAVICLLSLLHLVPSAI 333

The following BLAST results are available for this feature:

BLAST of CSPI01G04230 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UGPI7_ARATH	2.8e-52	43.23	Uncharacterized GPI-anchored protein At4g28100 OS=Arabidopsis thaliana GN=At4g28...	[more]

BLAST of CSPI01G04230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067KY46_JATCU	1.1e-121	72.44	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03622 PE=4 SV=1	[more]
A9PH01_POPTR	1.6e-120	67.98	Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1	[more]
B9IEA3_POPTR	3.7e-120	67.67	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s04320g PE=4 SV=1	[more]
A0A061FWM2_THECC	4.8e-120	69.72	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_012698 PE=4 SV=1	[more]
B9I2G6_POPTR	9.0e-119	66.06	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s04630g PE=4 SV=2	[more]

BLAST of CSPI01G04230 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18050.1	4.6e-98	57.53	unknown protein	[more]
AT4G28100.1	1.5e-53	43.23	unknown protein	[more]

BLAST of CSPI01G04230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778656457\|ref\|XP_011649105.1\|	1.1e-191	99.70	PREDICTED: LOW QUALITY PROTEIN: uncharacterized GPI-anchored protein At4g28100 [...	[more]
gi\|659106915\|ref\|XP_008453468.1\|	4.2e-186	96.41	PREDICTED: uncharacterized GPI-anchored protein At4g28100 [Cucumis melo]	[more]
gi\|802573686\|ref\|XP_012068434.1\|	1.6e-121	72.44	PREDICTED: uncharacterized GPI-anchored protein At4g28100 [Jatropha curcas]	[more]
gi\|118487658\|gb\|ABK95654.1\|	2.4e-120	67.98	unknown [Populus trichocarpa]	[more]
gi\|224135505\|ref\|XP_002322090.1\|	5.3e-120	67.67	hypothetical protein POPTR_0015s04320g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0008150	biological_process
biological_process	GO:0044699	single-organism process
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G04230.1	CSPI01G04230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34056	FAMILY NOT NAMED	coord: 11..331 score: 5.0E
None	No IPR available	PANTHER	PTHR34056:SF1	GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MRC8	coord: 11..331 score: 5.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G04230	Cla018935	Watermelon (97103) v1	cpiwmB100
CSPI01G04230	Csa1G024950	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G04230	MELO3C017348	Melon (DHL92) v3.5.1	cpimeB056
CSPI01G04230	ClCG06G014430	Watermelon (Charleston Gray)	cpiwcgB084
CSPI01G04230	Lsi06G012970	Bottle gourd (USVL1VR-Ls)	cpilsiB071
CSPI01G04230	MELO3C017348.2	Melon (DHL92) v3.6.1	cpimedB050
CSPI01G04230	CsaV3_1G004230	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G04230	Bhi02G000090	Wax gourd	cpiwgoB079
CSPI01G04230	Cucsa.111450	Cucumber (Gy14) v1	cgycpiB137
CSPI01G04230	CmoCh11G003070	Cucurbita moschata (Rifu)	cmocpiB079
CSPI01G04230	CmoCh10G003480	Cucurbita moschata (Rifu)	cmocpiB042
CSPI01G04230	Cp4.1LG04g13770	Cucurbita pepo (Zucchini)	cpecpiB657
CSPI01G04230	Cp4.1LG18g06840	Cucurbita pepo (Zucchini)	cpecpiB363
CSPI01G04230	CsGy1G004120	Cucumber (Gy14) v2	cgybcpiB001
CSPI01G04230	Carg09111	Silver-seed gourd	carcpiB0628
CSPI01G04230	Carg15171	Silver-seed gourd	carcpiB0821

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G04230	Wax gourd	cpiwgoB039
CSPI01G04230	Wild cucumber (PI 183967)	cpicpiB001
CSPI01G04230	Cucumber (Gy14) v1	cgycpiB161
CSPI01G04230	Cucumber (Gy14) v1	cgycpiB428
CSPI01G04230	Cucurbita maxima (Rimu)	cmacpiB051
CSPI01G04230	Cucurbita maxima (Rimu)	cmacpiB086
CSPI01G04230	Cucurbita maxima (Rimu)	cmacpiB223
CSPI01G04230	Cucurbita maxima (Rimu)	cmacpiB397
CSPI01G04230	Cucurbita moschata (Rifu)	cmocpiB209
CSPI01G04230	Cucumber (Chinese Long) v2	cpicuB006
CSPI01G04230	Melon (DHL92) v3.5.1	cpimeB029
CSPI01G04230	Watermelon (Charleston Gray)	cpiwcgB061
CSPI01G04230	Watermelon (97103) v1	cpiwmB068
CSPI01G04230	Cucurbita pepo (Zucchini)	cpecpiB027
CSPI01G04230	Cucurbita pepo (Zucchini)	cpecpiB509
CSPI01G04230	Bottle gourd (USVL1VR-Ls)	cpilsiB025
CSPI01G04230	Melon (DHL92) v3.6.1	cpimedB029
CSPI01G04230	Cucumber (Gy14) v2	cgybcpiB005
CSPI01G04230	Cucumber (Gy14) v2	cgybcpiB201
CSPI01G04230	Silver-seed gourd	carcpiB0419
CSPI01G04230	Cucumber (Chinese Long) v3	cpicucB004
CSPI01G04230	Watermelon (97103) v2	cpiwmbB057
CSPI01G04230	Watermelon (97103) v2	cpiwmbB080