CSPI01G04210 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCAAATTAGATGAAATAAAAAAATTGAAGAATTCTAGGGTTTGTTTCAATTGGACCTAAAAGAAAAAAAGGGTTAGAAAAGGAAAGAGAAAGGGAAGGAAAATCGGAGGAAAAAGAAAATGTCTGAAAGAGAAGACTCTCCTTCTCCTTCTCCTTCTCCTTCTCATCTTCATCATCTTCATCATCATCTTCATCATCTCCCTCCTCCTTCTCCTCGTGAATCTCTCTGTTTCTTCTTCAAAATCCTTTTCCATTCCCTTCAAATCTTCTCCAGAAACAAACGCCATTTCCTCTCCATCTTCCTCCTCCTCTCCCTACCTCTCTCTCTCCTCCTCTTCACCCTCTCTCTCTCCTCTCACCCTCTCAAATCCCATATCCTCCACCTCGAATCCGTCCTCCGCCATTCCCCCACCCGTTTCGAATTCCGCCATGTCTTCTCCGAGTCCCGTAACGACGCTTTCTCCCTCCTCCGTCTTCGTGCCGCCTTCTTCCTCCCCATCTACGCCTTTTCCCTCTTCCTTGCTGTCTCCACCGTCTCCTCAACTCTTCTCTCCTTCCATTCCAAACGCCCTTCTCTCAAATCCTCTCTCTCCGGCTTCAAAACTTCCTGGACTCGTCCTCTTGTTACCACCATTTGCATCTACGCCATTCTCGTAGCCTACTCTATTGTCCCTAACACCCTCGCTTCCATTTCCCCATCTCCAGCTTTCAGGTTTGTGGTTTTGGTGTTTGGCCTTGTCTTCGAGGTGTATTTGATTTCGATTACGAGTTTAGGACTCGTTGTTTCGATTGCCGAAGAGAGATTTGGTTTTGACGCAATTCGTTATGCAGCGGGGTTGATGGCGGATCGGAGATTGAGTGGTTCGATTCTTACGGCGATGTTTCTTGTTGGGTCGAGTTTGATCTCGTCGGAGATGGAGGGGCTTATGGATGGGGTTGATCATTGGATGAGGTCAACGGCAGCGGTGACGACGAATGTGGCGGTGAGCGTTGGGGACAAGATCGGGTTAATTTCTTTGTACGGTATGGTAATTATTTTCGGATACGTGGTAACAACGGTTTTTTACTGTGAGTGTAGAAAGAGGGATTTTGTTAGGGTGGAAAATGAAGAGGATCATGATCATATTGTCATGGTTTAATTCCCTTTTTTCTTCTTCTATATTGGTTTTCGTTTATGATTTAGTTTGAATAGAATTGGCTTTGGTGATTTTTTGTTTTATCAATTTTGTAGTTATTTGTTCAATCTATATGATCATTCTCAGTTGAAATTATTAATGAGTT ATGTCTGAAAGAGAAGACTCTCCTTCTCCTTCTCCTTCTCCTTCTCATCTTCATCATCTTCATCATCATCTTCATCATCTCCCTCCTCCTTCTCCTCGTGAATCTCTCTGTTTCTTCTTCAAAATCCTTTTCCATTCCCTTCAAATCTTCTCCAGAAACAAACGCCATTTCCTCTCCATCTTCCTCCTCCTCTCCCTACCTCTCTCTCTCCTCCTCTTCACCCTCTCTCTCTCCTCTCACCCTCTCAAATCCCATATCCTCCACCTCGAATCCGTCCTCCGCCATTCCCCCACCCGTTTCGAATTCCGCCATGTCTTCTCCGAGTCCCGTAACGACGCTTTCTCCCTCCTCCGTCTTCGTGCCGCCTTCTTCCTCCCCATCTACGCCTTTTCCCTCTTCCTTGCTGTCTCCACCGTCTCCTCAACTCTTCTCTCCTTCCATTCCAAACGCCCTTCTCTCAAATCCTCTCTCTCCGGCTTCAAAACTTCCTGGACTCGTCCTCTTGTTACCACCATTTGCATCTACGCCATTCTCGTAGCCTACTCTATTGTCCCTAACACCCTCGCTTCCATTTCCCCATCTCCAGCTTTCAGGTTTGTGGTTTTGGTGTTTGGCCTTGTCTTCGAGGTGTATTTGATTTCGATTACGAGTTTAGGACTCGTTGTTTCGATTGCCGAAGAGAGATTTGGTTTTGACGCAATTCGTTATGCAGCGGGGTTGATGGCGGATCGGAGATTGAGTGGTTCGATTCTTACGGCGATGTTTCTTGTTGGGTCGAGTTTGATCTCGTCGGAGATGGAGGGGCTTATGGATGGGGTTGATCATTGGATGAGGTCAACGGCAGCGGTGACGACGAATGTGGCGGTGAGCGTTGGGGACAAGATCGGGTTAATTTCTTTGTACGGTATGGTAATTATTTTCGGATACGTGGTAACAACGGTTTTTTACTGTGAGTGTAGAAAGAGGGATTTTGTTAGGGTGGAAAATGAAGAGGATCATGATCATATTGTCATGGTTTAA ATGTCTGAAAGAGAAGACTCTCCTTCTCCTTCTCCTTCTCCTTCTCATCTTCATCATCTTCATCATCATCTTCATCATCTCCCTCCTCCTTCTCCTCGTGAATCTCTCTGTTTCTTCTTCAAAATCCTTTTCCATTCCCTTCAAATCTTCTCCAGAAACAAACGCCATTTCCTCTCCATCTTCCTCCTCCTCTCCCTACCTCTCTCTCTCCTCCTCTTCACCCTCTCTCTCTCCTCTCACCCTCTCAAATCCCATATCCTCCACCTCGAATCCGTCCTCCGCCATTCCCCCACCCGTTTCGAATTCCGCCATGTCTTCTCCGAGTCCCGTAACGACGCTTTCTCCCTCCTCCGTCTTCGTGCCGCCTTCTTCCTCCCCATCTACGCCTTTTCCCTCTTCCTTGCTGTCTCCACCGTCTCCTCAACTCTTCTCTCCTTCCATTCCAAACGCCCTTCTCTCAAATCCTCTCTCTCCGGCTTCAAAACTTCCTGGACTCGTCCTCTTGTTACCACCATTTGCATCTACGCCATTCTCGTAGCCTACTCTATTGTCCCTAACACCCTCGCTTCCATTTCCCCATCTCCAGCTTTCAGGTTTGTGGTTTTGGTGTTTGGCCTTGTCTTCGAGGTGTATTTGATTTCGATTACGAGTTTAGGACTCGTTGTTTCGATTGCCGAAGAGAGATTTGGTTTTGACGCAATTCGTTATGCAGCGGGGTTGATGGCGGATCGGAGATTGAGTGGTTCGATTCTTACGGCGATGTTTCTTGTTGGGTCGAGTTTGATCTCGTCGGAGATGGAGGGGCTTATGGATGGGGTTGATCATTGGATGAGGTCAACGGCAGCGGTGACGACGAATGTGGCGGTGAGCGTTGGGGACAAGATCGGGTTAATTTCTTTGTACGGTATGGTAATTATTTTCGGATACGTGGTAACAACGGTTTTTTACTGTGAGTGTAGAAAGAGGGATTTTGTTAGGGTGGAAAATGAAGAGGATCATGATCATATTGTCATGGTTTAA
BLAST of CSPI01G04210 vs. TrEMBL
Match: M5Y204_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024378mg PE=4 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 1.6e-70 Identity = 150/273 (54.95%), Postives = 200/273 (73.26%), Query Frame = 1
BLAST of CSPI01G04210 vs. TrEMBL
Match: A0A0A0LV14_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G024930 PE=4 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 3.5e-70 Identity = 148/163 (90.80%), Postives = 150/163 (92.02%), Query Frame = 1
BLAST of CSPI01G04210 vs. TrEMBL
Match: W9RKJ7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023049 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 1.9e-68 Identity = 155/310 (50.00%), Postives = 212/310 (68.39%), Query Frame = 1
BLAST of CSPI01G04210 vs. TrEMBL
Match: F6H9Q9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0065g01070 PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 4.6e-62 Identity = 152/309 (49.19%), Postives = 206/309 (66.67%), Query Frame = 1
BLAST of CSPI01G04210 vs. TrEMBL
Match: A5ASN5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031957 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 6.7e-61 Identity = 150/309 (48.54%), Postives = 204/309 (66.02%), Query Frame = 1
BLAST of CSPI01G04210 vs. TAIR10
Match: AT4G16850.1 (AT4G16850.1 unknown protein) HSP 1 Score: 180.3 bits (456), Expect = 2.1e-45 Identity = 112/281 (39.86%), Postives = 164/281 (58.36%), Query Frame = 1
BLAST of CSPI01G04210 vs. NCBI nr
Match: gi|659069785|ref|XP_008451781.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103492961 [Cucumis melo]) HSP 1 Score: 578.9 bits (1491), Expect = 5.6e-162 Identity = 316/339 (93.22%), Postives = 318/339 (93.81%), Query Frame = 1
BLAST of CSPI01G04210 vs. NCBI nr
Match: gi|778656449|ref|XP_011649097.1| (PREDICTED: uncharacterized protein LOC105434581 [Cucumis sativus]) HSP 1 Score: 371.7 bits (953), Expect = 1.4e-99 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 1
BLAST of CSPI01G04210 vs. NCBI nr
Match: gi|645233870|ref|XP_008223549.1| (PREDICTED: uncharacterized protein LOC103323338 [Prunus mume]) HSP 1 Score: 283.9 bits (725), Expect = 3.7e-73 Identity = 157/285 (55.09%), Postives = 207/285 (72.63%), Query Frame = 1
BLAST of CSPI01G04210 vs. NCBI nr
Match: gi|694385272|ref|XP_009368464.1| (PREDICTED: uncharacterized protein LOC103957967 [Pyrus x bretschneideri]) HSP 1 Score: 276.6 bits (706), Expect = 6.0e-71 Identity = 148/282 (52.48%), Postives = 207/282 (73.40%), Query Frame = 1
BLAST of CSPI01G04210 vs. NCBI nr
Match: gi|596244990|ref|XP_007224536.1| (hypothetical protein PRUPE_ppa024378mg [Prunus persica]) HSP 1 Score: 274.6 bits (701), Expect = 2.3e-70 Identity = 150/273 (54.95%), Postives = 200/273 (73.26%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |