CSPI01G03290 (gene) Wild cucumber (PI 183967)

NameCSPI01G03290
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 2061975 .. 2063279 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAACGAATTTTCTGATTTGGTAGTAGACAATATGAAGAAAAGCCGAAAAGTGGAGAAGAATAAATTGAAAGTTGATGATATTGAGTTCTTTAAGAGAAGAAATTATGTTGTACAAGAGAGCGATGCTGGTCCTAGTGAATCAGAAGCAAGTGGAGATAGAATGAGTCGGTATTCCTCGAAGAGTTCAGTCAAGAGTTCAATCGAAGACGAATTGCCTGAGCTTGTTGTTTTTCTTCAAGAAACAAACTATGAATTTGTGAAAGACATTTGCATTGACGAAGCAGTAACTTCACGTGAAAAGTGCTTTGAGGAGAGCTGTCACACAGAAAACGATCATGTCCCCTGCATGCTCAAATACAATGCAGGAGAAACTGATGCTGAATCAACTGAAGAATCCAACGATTCGGAGTCGACAATTTCAAGTACTGATTCAACACAGACTCTTGATAAAAACTTTAACGAAGTTTATGAGAAGCAAAAGTTTCATTCTGATGCAATAGATGAAGTTCCTTCTGAGGTTCCTCATAAGAAATCTGTGCCAAAATTATTTCTTGATAGAAAGGTGAGAGCAACCTTAACTTAGCATTCTTCCTGAGATCCTTTTTAACTAGAAAATTTAATTTGATTGTCTGCACCCTTAGTAGGTTACAGGTAAAAAGGAAGCATCTTCTACAAACTCGATTGCAATATCATTGAATAAGATACTCGATGAAAACAAAAACAAAGGCAAAGCAGTTGCCAGAAGCAACATTGAACATGGCAGCATTTGTCGCAACTCCGGTTTATCACAAAGCACAGTAGAGGGTGGTAGCAGCAATTGGACGGCAGGTTGTGGTCATTGTCGTGACTGTACCATGGCCGAGTACTATACACCCGAAAATGAAACGGGATTATACAGTAGCCATTGTTCCTCTGCAGGTGATCCTAGTTTGAACTCAGTGAGAAGACCCTCATTGTCGTCTTATTTGGGCAGTGGATCTCTTCGGTCGAATAGCAGCACCAACAGCTCACATTCTTTTGCTTTTCCAATGTACTTTTGCTTCTCTAAACATTATCTCATTCTACTTCATTAATTGAAACTGAAACATGTAGCTTATGATCTTGACCTCTTCTTGAATTCACAGTTTGCCAACAGAATGGAATGGAAGTCCAGAAAGGATGGCAAAAGCTGATCCGTTGCAAACACGAAGGCGGAAACTATGGAGACTATGTTTTCCCTGCTGTAATTTCTGAGCCTCTTGTTGCCCAACCTGTCAGTGCTCTTGATTGTTTTCACTCAGATTCATTTTCATTTGTATGA

mRNA sequence

ATGAGGAACGAATTTTCTGATTTGGTAGTAGACAATATGAAGAAAAGCCGAAAAGTGGAGAAGAATAAATTGAAAGTTGATGATATTGAGTTCTTTAAGAGAAGAAATTATGTTGTACAAGAGAGCGATGCTGGTCCTAGTGAATCAGAAGCAAGTGGAGATAGAATGAGTCGGTATTCCTCGAAGAGTTCAGTCAAGAGTTCAATCGAAGACGAATTGCCTGAGCTTGTTGTTTTTCTTCAAGAAACAAACTATGAATTTGTGAAAGACATTTGCATTGACGAAGCAGTAACTTCACGTGAAAAGTGCTTTGAGGAGAGCTGTCACACAGAAAACGATCATGTCCCCTGCATGCTCAAATACAATGCAGGAGAAACTGATGCTGAATCAACTGAAGAATCCAACGATTCGGAGTCGACAATTTCAAGTACTGATTCAACACAGACTCTTGATAAAAACTTTAACGAAGTTTATGAGAAGCAAAAGTTTCATTCTGATGCAATAGATGAAGTTCCTTCTGAGGTTCCTCATAAGAAATCTGTGCCAAAATTATTTCTTGATAGAAAGGTTACAGGTAAAAAGGAAGCATCTTCTACAAACTCGATTGCAATATCATTGAATAAGATACTCGATGAAAACAAAAACAAAGGCAAAGCAGTTGCCAGAAGCAACATTGAACATGGCAGCATTTGTCGCAACTCCGGTTTATCACAAAGCACAGTAGAGGGTGGTAGCAGCAATTGGACGGCAGGTTGTGGTCATTGTCGTGACTGTACCATGGCCGAGTACTATACACCCGAAAATGAAACGGGATTATACAGTAGCCATTGTTCCTCTGCAGTGGATCTCTTCGGTCGAATAGCAGCACCAACAGCTCACATTCTTTTGCTTTTCCAATTTTGCCAACAGAATGGAATGGAAGTCCAGAAAGGATGGCAAAAGCTGATCCGTTGCAAACACGAAGGCGGAAACTATGGAGACTATGTTTTCCCTGCTGTAATTTCTGAGCCTCTTGTTGCCCAACCTGTCAGTGCTCTTGATTGTTTTCACTCAGATTCATTTTCATTTGTATGA

Coding sequence (CDS)

ATGAGGAACGAATTTTCTGATTTGGTAGTAGACAATATGAAGAAAAGCCGAAAAGTGGAGAAGAATAAATTGAAAGTTGATGATATTGAGTTCTTTAAGAGAAGAAATTATGTTGTACAAGAGAGCGATGCTGGTCCTAGTGAATCAGAAGCAAGTGGAGATAGAATGAGTCGGTATTCCTCGAAGAGTTCAGTCAAGAGTTCAATCGAAGACGAATTGCCTGAGCTTGTTGTTTTTCTTCAAGAAACAAACTATGAATTTGTGAAAGACATTTGCATTGACGAAGCAGTAACTTCACGTGAAAAGTGCTTTGAGGAGAGCTGTCACACAGAAAACGATCATGTCCCCTGCATGCTCAAATACAATGCAGGAGAAACTGATGCTGAATCAACTGAAGAATCCAACGATTCGGAGTCGACAATTTCAAGTACTGATTCAACACAGACTCTTGATAAAAACTTTAACGAAGTTTATGAGAAGCAAAAGTTTCATTCTGATGCAATAGATGAAGTTCCTTCTGAGGTTCCTCATAAGAAATCTGTGCCAAAATTATTTCTTGATAGAAAGGTTACAGGTAAAAAGGAAGCATCTTCTACAAACTCGATTGCAATATCATTGAATAAGATACTCGATGAAAACAAAAACAAAGGCAAAGCAGTTGCCAGAAGCAACATTGAACATGGCAGCATTTGTCGCAACTCCGGTTTATCACAAAGCACAGTAGAGGGTGGTAGCAGCAATTGGACGGCAGGTTGTGGTCATTGTCGTGACTGTACCATGGCCGAGTACTATACACCCGAAAATGAAACGGGATTATACAGTAGCCATTGTTCCTCTGCAGTGGATCTCTTCGGTCGAATAGCAGCACCAACAGCTCACATTCTTTTGCTTTTCCAATTTTGCCAACAGAATGGAATGGAAGTCCAGAAAGGATGGCAAAAGCTGATCCGTTGCAAACACGAAGGCGGAAACTATGGAGACTATGTTTTCCCTGCTGTAATTTCTGAGCCTCTTGTTGCCCAACCTGTCAGTGCTCTTGATTGTTTTCACTCAGATTCATTTTCATTTGTATGA
BLAST of CSPI01G03290 vs. TrEMBL
Match: A0A0A0LRX2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015630 PE=4 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 1.5e-151
Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 1

Query: 1   MRNEFSDLVVDNMKKSRKVEKNKLKVDDIEFFKRRNYVVQESDAGPSESEASGDRMSRYS 60
           MRNEFSDLVVDNMKKSRKVEKNKLKVDDIEFFKRRNYVVQESDAGPSESEASGDRMSRYS
Sbjct: 1   MRNEFSDLVVDNMKKSRKVEKNKLKVDDIEFFKRRNYVVQESDAGPSESEASGDRMSRYS 60

Query: 61  SKSSVKSSIEDELPELVVFLQETNYEFVKDICIDEAVTSREKCFEESCHTENDHVPCMLK 120
           SKSSVKSSIEDELPELVVFLQETNYEFVKDICIDEAVTSREKCFEESCHTENDHVPCMLK
Sbjct: 61  SKSSVKSSIEDELPELVVFLQETNYEFVKDICIDEAVTSREKCFEESCHTENDHVPCMLK 120

Query: 121 YNAGETDAESTEESNDSESTISSTDSTQTLDKNFNEVYEKQKFHSDAIDEVPSEVPHKKS 180
           YNAGETDAESTEESNDSESTISSTDSTQTLDKNFNEVYEKQKFHSDAIDEVPSEVPHKKS
Sbjct: 121 YNAGETDAESTEESNDSESTISSTDSTQTLDKNFNEVYEKQKFHSDAIDEVPSEVPHKKS 180

Query: 181 VPKLFLDRKVTGKKEASSTNSIAISLNKILDENKNKGKAVARSNIEHGSICRNSGLSQST 240
           VPKLFLDRKVTGKKEASSTNSIAISLNKILDENKNKGKAVARSNIEHGSICRNSGLSQST
Sbjct: 181 VPKLFLDRKVTGKKEASSTNSIAISLNKILDENKNKGKAVARSNIEHGSICRNSGLSQST 240

Query: 241 VEGGSSNWTAGCGHCRDCTMAEYYTPENETGLYSSHCSSAVD 283
           VEGGSSNWTAGCGHCRDCTMAEYYTPENETGLYSSHCSSA D
Sbjct: 241 VEGGSSNWTAGCGHCRDCTMAEYYTPENETGLYSSHCSSAGD 282

BLAST of CSPI01G03290 vs. TrEMBL
Match: M5WEG3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022833mg PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.9e-06
Identity = 36/79 (45.57%), Postives = 55/79 (69.62%), Query Frame = 1

Query: 66  KSSIEDELPELVVFLQET-NYEFVKDICIDEAVTSREKCFEESCHTENDHVPCMLKYNAG 125
           K  +++ELPELV FLQE+ NY+  KDICID+ V S+EK   E+C  ++  + C+L  +  
Sbjct: 107 KVGMDNELPELVAFLQESSNYQCFKDICIDKEVPSQEKYLVENCELDHSRISCILDSDM- 166

Query: 126 ETDAESTEESNDSESTISS 144
           ++ +ES  E+ DSES+IS+
Sbjct: 167 DSSSESIGETLDSESSIST 184

BLAST of CSPI01G03290 vs. NCBI nr
Match: gi|778656194|ref|XP_011648594.1| (PREDICTED: uncharacterized protein LOC105434534 isoform X1 [Cucumis sativus])

HSP 1 Score: 543.9 bits (1400), Expect = 2.1e-151
Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 1

Query: 1   MRNEFSDLVVDNMKKSRKVEKNKLKVDDIEFFKRRNYVVQESDAGPSESEASGDRMSRYS 60
           MRNEFSDLVVDNMKKSRKVEKNKLKVDDIEFFKRRNYVVQESDAGPSESEASGDRMSRYS
Sbjct: 1   MRNEFSDLVVDNMKKSRKVEKNKLKVDDIEFFKRRNYVVQESDAGPSESEASGDRMSRYS 60

Query: 61  SKSSVKSSIEDELPELVVFLQETNYEFVKDICIDEAVTSREKCFEESCHTENDHVPCMLK 120
           SKSSVKSSIEDELPELVVFLQETNYEFVKDICIDEAVTSREKCFEESCHTENDHVPCMLK
Sbjct: 61  SKSSVKSSIEDELPELVVFLQETNYEFVKDICIDEAVTSREKCFEESCHTENDHVPCMLK 120

Query: 121 YNAGETDAESTEESNDSESTISSTDSTQTLDKNFNEVYEKQKFHSDAIDEVPSEVPHKKS 180
           YNAGETDAESTEESNDSESTISSTDSTQTLDKNFNEVYEKQKFHSDAIDEVPSEVPHKKS
Sbjct: 121 YNAGETDAESTEESNDSESTISSTDSTQTLDKNFNEVYEKQKFHSDAIDEVPSEVPHKKS 180

Query: 181 VPKLFLDRKVTGKKEASSTNSIAISLNKILDENKNKGKAVARSNIEHGSICRNSGLSQST 240
           VPKLFLDRKVTGKKEASSTNSIAISLNKILDENKNKGKAVARSNIEHGSICRNSGLSQST
Sbjct: 181 VPKLFLDRKVTGKKEASSTNSIAISLNKILDENKNKGKAVARSNIEHGSICRNSGLSQST 240

Query: 241 VEGGSSNWTAGCGHCRDCTMAEYYTPENETGLYSSHCSSAVD 283
           VEGGSSNWTAGCGHCRDCTMAEYYTPENETGLYSSHCSSA D
Sbjct: 241 VEGGSSNWTAGCGHCRDCTMAEYYTPENETGLYSSHCSSAGD 282

BLAST of CSPI01G03290 vs. NCBI nr
Match: gi|659106371|ref|XP_008453313.1| (PREDICTED: uncharacterized protein LOC103494068 [Cucumis melo])

HSP 1 Score: 496.9 bits (1278), Expect = 3.0e-137
Identity = 262/284 (92.25%), Postives = 270/284 (95.07%), Query Frame = 1

Query: 1   MRNEFSDLVVDNMKKSRKVEKNKLKVDDIEFFKRRNYVVQESDAGPSESEASGDRMSRYS 60
           MRNEFSDLVVDNMKKSRKVEKNKLKVDDIEFFKRRNYVVQE DAGPSESEASGDRMSRYS
Sbjct: 1   MRNEFSDLVVDNMKKSRKVEKNKLKVDDIEFFKRRNYVVQERDAGPSESEASGDRMSRYS 60

Query: 61  SKSSVKSSIEDELPELVVFLQETNYEFVKDICIDEAVTSREKCFEESCHTENDHVPCMLK 120
           SKSSVKSSIEDELPELVVFLQETNYEFVKDICIDEAVTSR+KCF+ESCHTENDHVPCMLK
Sbjct: 61  SKSSVKSSIEDELPELVVFLQETNYEFVKDICIDEAVTSRQKCFKESCHTENDHVPCMLK 120

Query: 121 YNAGETDAESTEESNDSESTISSTDSTQTLDKNFNEVYEKQKFHSDAIDEVPSEVPHKKS 180
           YNAGETDAESTEESNDS+STISS +STQTL++NFNEVYEKQK HSDAID VPSEVP KKS
Sbjct: 121 YNAGETDAESTEESNDSDSTISSIESTQTLEENFNEVYEKQKVHSDAID-VPSEVPRKKS 180

Query: 181 VPKLFLDRKVTGKKEASSTNSIAISLNKILDENKNKGKAVARSNIEHGSICRNSGLSQST 240
           VPKLFLDRKVTGKK ASSTNSIAISLNKILDEN+NKGKAVARSNIEHG    NSGLSQST
Sbjct: 181 VPKLFLDRKVTGKKAASSTNSIAISLNKILDENRNKGKAVARSNIEHGKNFCNSGLSQST 240

Query: 241 VEGGSSNWTAGCGHCRDCTMAEY--YTPENETGLYSSHCSSAVD 283
           +EGGSSNWTAGCGHC DCTMAEY  YTPENETGLYSSHCSSA D
Sbjct: 241 IEGGSSNWTAGCGHCHDCTMAEYKDYTPENETGLYSSHCSSAGD 283

BLAST of CSPI01G03290 vs. NCBI nr
Match: gi|778656197|ref|XP_011648601.1| (PREDICTED: uncharacterized protein LOC105434534 isoform X2 [Cucumis sativus])

HSP 1 Score: 361.3 bits (926), Expect = 1.9e-96
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1

Query: 1   MRNEFSDLVVDNMKKSRKVEKNKLKVDDIEFFKRRNYVVQESDAGPSESEASGDRMSRYS 60
           MRNEFSDLVVDNMKKSRKVEKNKLKVDDIEFFKRRNYVVQESDAGPSESEASGDRMSRYS
Sbjct: 1   MRNEFSDLVVDNMKKSRKVEKNKLKVDDIEFFKRRNYVVQESDAGPSESEASGDRMSRYS 60

Query: 61  SKSSVKSSIEDELPELVVFLQETNYEFVKDICIDEAVTSREKCFEESCHTENDHVPCMLK 120
           SKSSVKSSIEDELPELVVFLQETNYEFVKDICIDEAVTSREKCFEESCHTENDHVPCMLK
Sbjct: 61  SKSSVKSSIEDELPELVVFLQETNYEFVKDICIDEAVTSREKCFEESCHTENDHVPCMLK 120

Query: 121 YNAGETDAESTEESNDSESTISSTDSTQTLDKNFNEVYEKQKFHSDAIDEVPSEVPHKKS 180
           YNAGETDAESTEESNDSESTISSTDSTQTLDKNFNEVYEKQKFHSDAIDEVPSEVPHKKS
Sbjct: 121 YNAGETDAESTEESNDSESTISSTDSTQTLDKNFNEVYEKQKFHSDAIDEVPSEVPHKKS 180

Query: 181 VPKLFLDRK 190
           VPKLFLDRK
Sbjct: 181 VPKLFLDRK 189

BLAST of CSPI01G03290 vs. NCBI nr
Match: gi|645269670|ref|XP_008240104.1| (PREDICTED: uncharacterized protein DDB_G0271670-like [Prunus mume])

HSP 1 Score: 68.9 bits (167), Expect = 2.0e-08
Identity = 72/229 (31.44%), Postives = 118/229 (51.53%), Query Frame = 1

Query: 69  IEDELPELVVFLQET-NYEFVKDICIDEAVTSREKCFEESCHTENDHVPCMLKYNAGETD 128
           +++ELPELV FLQE+ NY+  KDICID+ V S+EK   E+C  ++  + C+L  +  ++ 
Sbjct: 1   MDNELPELVAFLQESSNYQCFKDICIDKEVPSQEKYLVENCELDHSRIACILDSDL-DSS 60

Query: 129 AESTEESNDSESTISSTD------STQTLDKNFNEVYEKQKFHSDAIDEVPSEVPHKKSV 188
           +ES  E+ DSES+ S+        S Q   KN     E  K+  ++ D        KK+V
Sbjct: 61  SESIGETLDSESSASTEHDCDKDVSEQCGSKNLKT--EDDKYFGESDDH-----STKKTV 120

Query: 189 PKLFLDRKVTGKKEASSTNSIAISLNKILDENKNKGKAVARSNIEH-GSICRNSGLSQST 248
            +  L  +  G   A   NS+ +S ++ +D+N    KA  RS+++   S+ + +G+   T
Sbjct: 121 SETLLIVR-QGPNNAVLANSMVLSKSQAIDDNSLTSKASVRSDLDDASSLGKLNGI--IT 180

Query: 249 VEGGSSNWTAGCGHCRDCTMAEYYTPE-NETGLYSSH-CSSAVDLFGRI 288
           ++ G    T     C    M   + P+ +E G+ +S  CS  + L G I
Sbjct: 181 IDEGREEVTQR-AECHPPDMGNMFRPDSSEDGMSASEPCSGLLALSGGI 217

BLAST of CSPI01G03290 vs. NCBI nr
Match: gi|764583487|ref|XP_004301097.2| (PREDICTED: uncharacterized protein LOC101293793 isoform X1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 62.0 bits (149), Expect = 2.4e-06
Identity = 61/212 (28.77%), Postives = 98/212 (46.23%), Query Frame = 1

Query: 18  KVEKNKLKVDDIEFF---KRRNYVVQESDAGPSESEASGDRMSRYSSKSSVKSSIEDELP 77
           KV++N    D  EF    KR N  V +S                  S    K++++ +LP
Sbjct: 43  KVQRNTSMKDSNEFIDNPKRENPEVVQSP----------------HSDEKWKAAMDYDLP 102

Query: 78  ELVVFLQETNYEFVKDICIDEAVTSREKCFEESCHTENDHVPCMLKYNAGETDAESTEES 137
           ELV FLQ++ Y FVKDICID  V S+ KC EE+C  + ++V CM+  +A E+ ++ T ES
Sbjct: 103 ELVAFLQDSGYPFVKDICIDSVVPSQNKCLEENCDLDFNNVSCMVSSDA-ESSSKLTVES 162

Query: 138 NDSESTISSTDSTQTLDKNFNEVYEKQKFHSDAI----------DEVPSEVPHKKSVPKL 197
             S  + +S+ S    D+ + E   KQ    +            D+  S+   K  + + 
Sbjct: 163 QCSSESSNSSVSKHISDQLWEEDVSKQSGFKNLTTEDGENYGEKDDTSSDHSTKMIISET 222

Query: 198 FLDRKVTGKKEASSTNSIAISLNKILDENKNK 217
            L  +    K   S + +  S   I ++ ++K
Sbjct: 223 LLQIRQDPTKAVLSDSVVLSSTEAIYEKRRSK 237

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LRX2_CUCSA1.5e-15199.65Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015630 PE=4 SV=1[more]
M5WEG3_PRUPE2.9e-0645.57Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022833mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|778656194|ref|XP_011648594.1|2.1e-15199.65PREDICTED: uncharacterized protein LOC105434534 isoform X1 [Cucumis sativus][more]
gi|659106371|ref|XP_008453313.1|3.0e-13792.25PREDICTED: uncharacterized protein LOC103494068 [Cucumis melo][more]
gi|778656197|ref|XP_011648601.1|1.9e-96100.00PREDICTED: uncharacterized protein LOC105434534 isoform X2 [Cucumis sativus][more]
gi|645269670|ref|XP_008240104.1|2.0e-0831.44PREDICTED: uncharacterized protein DDB_G0271670-like [Prunus mume][more]
gi|764583487|ref|XP_004301097.2|2.4e-0628.77PREDICTED: uncharacterized protein LOC101293793 isoform X1 [Fragaria vesca subsp... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G03290.1CSPI01G03290.1mRNA


The following gene(s) are paralogous to this gene:

None