CSPI01G03030 (gene) Wild cucumber (PI 183967)

NameCSPI01G03030
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 1924769 .. 1925275 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTTCTGGAAAAGAAGAATTCCTTTATGGAAGAAGAAAATAATTGAAGAGGAAGAAGAGAAGGAGGAGGAGGAGGAGGATGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCAGAGAATGAGAATGAGAAAGAGGAGGTAGAGAATGAGAATGAGAAGGAGGAAGCAGAGAATGAGGAGGAGGCAGAGAGTGAGGAGGAGGAGAAAGAGCAAGTGCAAGTCCAGCAAGAAGAAGAGAAAGTGCAAGTCCAGGAAGAAGAAAAGCAGGAGGAGGAAGAAGTCCAACAAGCACAACAGCCACGACAACAGCCACGACAACAGCCACGACAACAGCCACAACAAGCCCAAGGGCAAGAGAGATCTGTTTGCAACTGTGAAAATAGTTCATGCAAGCACCACCGTTGTGGCTGTAAAACCAATCAACTGCCCTGTATCGCTGGATGCCATTGTACTGGCAATCAAAATTGCAAAAATCCCTTTACACATATATAA

mRNA sequence

ATGCCTTTCTGGAAAAGAAGAATTCCTTTATGGAAGAAGAAAATAATTGAAGAGGAAGAAGAGAAGGAGGAGGAGGAGGAGGATGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCAGAGAATGAGAATGAGAAAGAGGAGGTAGAGAATGAGAATGAGAAGGAGGAAGCAGAGAATGAGGAGGAGGCAGAGAGTGAGGAGGAGGAGAAAGAGCAAGTGCAAGTCCAGCAAGAAGAAGAGAAAGTGCAAGTCCAGGAAGAAGAAAAGCAGGAGGAGGAAGAAGTCCAACAAGCACAACAGCCACGACAACAGCCACGACAACAGCCACGACAACAGCCACAACAAGCCCAAGGGCAAGAGAGATCTGTTTGCAACTGTGAAAATAGTTCATGCAAGCACCACCGTTGTGGCTGTAAAACCAATCAACTGCCCTGTATCGCTGGATGCCATTGTACTGGCAATCAAAATTGCAAAAATCCCTTTACACATATATAA

Coding sequence (CDS)

ATGCCTTTCTGGAAAAGAAGAATTCCTTTATGGAAGAAGAAAATAATTGAAGAGGAAGAAGAGAAGGAGGAGGAGGAGGAGGATGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCAGAGAATGAGAATGAGAAAGAGGAGGTAGAGAATGAGAATGAGAAGGAGGAAGCAGAGAATGAGGAGGAGGCAGAGAGTGAGGAGGAGGAGAAAGAGCAAGTGCAAGTCCAGCAAGAAGAAGAGAAAGTGCAAGTCCAGGAAGAAGAAAAGCAGGAGGAGGAAGAAGTCCAACAAGCACAACAGCCACGACAACAGCCACGACAACAGCCACGACAACAGCCACAACAAGCCCAAGGGCAAGAGAGATCTGTTTGCAACTGTGAAAATAGTTCATGCAAGCACCACCGTTGTGGCTGTAAAACCAATCAACTGCCCTGTATCGCTGGATGCCATTGTACTGGCAATCAAAATTGCAAAAATCCCTTTACACATATATAA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G03030.1CSPI01G03030.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 8..101
scor

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G03030CsaV3_1G003100Cucumber (Chinese Long) v3cpicucB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G03030Silver-seed gourdcarcpiB0420
CSPI01G03030Silver-seed gourdcarcpiB0497
CSPI01G03030Silver-seed gourdcarcpiB0500
CSPI01G03030Silver-seed gourdcarcpiB0550
CSPI01G03030Silver-seed gourdcarcpiB0626
CSPI01G03030Silver-seed gourdcarcpiB0628
CSPI01G03030Cucumber (Chinese Long) v3cpicucB003
CSPI01G03030Watermelon (97103) v2cpiwmbB054
CSPI01G03030Watermelon (97103) v2cpiwmbB056
CSPI01G03030Watermelon (97103) v2cpiwmbB071
CSPI01G03030Wax gourdcpiwgoB043
CSPI01G03030Wax gourdcpiwgoB082
CSPI01G03030Wild cucumber (PI 183967)cpicpiB000
CSPI01G03030Wild cucumber (PI 183967)cpicpiB004
CSPI01G03030Cucumber (Gy14) v1cgycpiB138
CSPI01G03030Cucumber (Gy14) v1cgycpiB140
CSPI01G03030Cucumber (Gy14) v1cgycpiB310
CSPI01G03030Cucurbita maxima (Rimu)cmacpiB052
CSPI01G03030Cucurbita maxima (Rimu)cmacpiB070
CSPI01G03030Cucurbita maxima (Rimu)cmacpiB086
CSPI01G03030Cucurbita maxima (Rimu)cmacpiB101
CSPI01G03030Cucurbita maxima (Rimu)cmacpiB397
CSPI01G03030Cucurbita moschata (Rifu)cmocpiB043
CSPI01G03030Cucurbita moschata (Rifu)cmocpiB079
CSPI01G03030Cucurbita moschata (Rifu)cmocpiB093
CSPI01G03030Cucurbita moschata (Rifu)cmocpiB203
CSPI01G03030Cucurbita moschata (Rifu)cmocpiB388
CSPI01G03030Cucumber (Chinese Long) v2cpicuB000
CSPI01G03030Cucumber (Chinese Long) v2cpicuB005
CSPI01G03030Cucumber (Chinese Long) v2cpicuB011
CSPI01G03030Melon (DHL92) v3.5.1cpimeB020
CSPI01G03030Melon (DHL92) v3.5.1cpimeB046
CSPI01G03030Watermelon (Charleston Gray)cpiwcgB058
CSPI01G03030Watermelon (Charleston Gray)cpiwcgB060
CSPI01G03030Watermelon (Charleston Gray)cpiwcgB074
CSPI01G03030Watermelon (97103) v1cpiwmB065
CSPI01G03030Watermelon (97103) v1cpiwmB067
CSPI01G03030Watermelon (97103) v1cpiwmB089
CSPI01G03030Cucurbita pepo (Zucchini)cpecpiB029
CSPI01G03030Cucurbita pepo (Zucchini)cpecpiB353
CSPI01G03030Cucurbita pepo (Zucchini)cpecpiB364
CSPI01G03030Cucurbita pepo (Zucchini)cpecpiB512
CSPI01G03030Cucurbita pepo (Zucchini)cpecpiB642
CSPI01G03030Bottle gourd (USVL1VR-Ls)cpilsiB024
CSPI01G03030Bottle gourd (USVL1VR-Ls)cpilsiB042
CSPI01G03030Bottle gourd (USVL1VR-Ls)cpilsiB062
CSPI01G03030Bottle gourd (USVL1VR-Ls)cpilsiB070
CSPI01G03030Melon (DHL92) v3.6.1cpimedB019
CSPI01G03030Melon (DHL92) v3.6.1cpimedB040
CSPI01G03030Melon (DHL92) v3.6.1cpimedB049
CSPI01G03030Cucumber (Gy14) v2cgybcpiB001
CSPI01G03030Cucumber (Gy14) v2cgybcpiB004