BhiUN316G44 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	BhiUN316G44
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	thioredoxin domain-containing protein 9 homolog
Location	Contig316 : 556837 .. 557019 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAGGATTTGATGGGCTTGGTGGAACTGACGAATTCAGCACAGAGGAATTGGAAGATAGATTGGCAAAAAGTCAAGTCATCTTCCATGAAGGTGAATCATCCATAAATGCTTCAAAATCTAGTGCACAAACCAGGAGAAGTGTACGACAAAGTACAAGATCAGACTCATCAGATTCAGAATAA

mRNA sequence

GTAGGATTTGATGGGCTTGGTGGAACTGACGAATTCAGCACAGAGGAATTGGAAGATAGATTGGCAAAAAGTCAAGTCATCTTCCATGAAGGTGAATCATCCATAAATGCTTCAAAATCTAGTGCACAAACCAGGAGAAGTGTACGACAAAGTACAAGATCAGACTCATCAGATTCAGAATAA

Coding sequence (CDS)

GTAGGATTTGATGGGCTTGGTGGAACTGACGAATTCAGCACAGAGGAATTGGAAGATAGATTGGCAAAAAGTCAAGTCATCTTCCATGAAGGTGAATCATCCATAAATGCTTCAAAATCTAGTGCACAAACCAGGAGAAGTGTACGACAAAGTACAAGATCAGACTCATCAGATTCAGAATAA

Protein sequence

VGFDGLGGTDEFSTEELEDRLAKSQVIFHEGESSINASKSSAQTRRSVRQSTRSDSSDSE

Homology

[Close]

BLAST of BhiUN316G44 vs. TAIR10
Match: AT2G18990.1 (thioredoxin domain-containing protein 9 homolog)

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-11
Identity = 38/60 (63.33%), Postives = 49/60 (81.67%), Query Frame = 0


Query: 1   VGFDGLGGTDEFSTEELEDRLAKSQVIFHEGESSINASKSSAQTRRSVRQSTRSDSSDSE 60
           VGF+ LGG D+FSTE+LE+R+A++QVI ++GESS    KS+ Q RR+VRQS RSD SDSE
Sbjct: 153 VGFNELGGKDDFSTEDLEERIARAQVIHYDGESSSLKPKSTTQVRRNVRQSARSD-SDSE 211

[Close]

BLAST of BhiUN316G44 vs. TAIR10
Match: AT3G25580.1 (Thioredoxin superfamily protein)

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-11
Identity = 39/60 (65.00%), Postives = 50/60 (83.33%), Query Frame = 0


Query: 1   VGFDGLGGTDEFSTEELEDRLAKSQVIFHEGESSINASKSSAQTRRSVRQSTRSDSSDSE 60
           VGF+ LGG D+FSTE+LE+R+A++QVI +EGESS+   KS+ Q RR+VRQS RSD SDSE
Sbjct: 153 VGFNELGGKDDFSTEDLEERIARAQVIHYEGESSLK-QKSTTQVRRNVRQSARSD-SDSE 210

[Close]

BLAST of BhiUN316G44 vs. Swiss-Prot
Match: sp|O64628|TXND9_ARATH (Thioredoxin domain-containing protein 9 homolog OS=Arabidopsis thaliana OX=3702 GN=At2g18990 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.8e-10
Identity = 38/60 (63.33%), Postives = 49/60 (81.67%), Query Frame = 0


Query: 1   VGFDGLGGTDEFSTEELEDRLAKSQVIFHEGESSINASKSSAQTRRSVRQSTRSDSSDSE 60
           VGF+ LGG D+FSTE+LE+R+A++QVI ++GESS    KS+ Q RR+VRQS RSD SDSE
Sbjct: 153 VGFNELGGKDDFSTEDLEERIARAQVIHYDGESSSLKPKSTTQVRRNVRQSARSD-SDSE 211

[Close]

BLAST of BhiUN316G44 vs. TrEMBL
Match: tr|A0A1S3C206|A0A1S3C206_CUCME (thioredoxin domain-containing protein 9 homolog OS=Cucumis melo OX=3656 GN=LOC103495950 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.5e-19
Identity = 57/60 (95.00%), Postives = 57/60 (95.00%), Query Frame = 0


Query: 1   VGFDGLGGTDEFSTEELEDRLAKSQVIFHEGESSINASKSSAQTRRSVRQSTRSDSSDSE 60
           VGFD LGGTDEFSTEELEDRLAK QVIFHEGESSIN SKSSAQTRRSVRQSTRSDSSDSE
Sbjct: 154 VGFDELGGTDEFSTEELEDRLAKCQVIFHEGESSINTSKSSAQTRRSVRQSTRSDSSDSE 213

[Close]

BLAST of BhiUN316G44 vs. TrEMBL
Match: tr|A0A0A0LT99|A0A0A0LT99_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418960 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.5e-19
Identity = 57/60 (95.00%), Postives = 57/60 (95.00%), Query Frame = 0


Query: 1   VGFDGLGGTDEFSTEELEDRLAKSQVIFHEGESSINASKSSAQTRRSVRQSTRSDSSDSE 60
           VGFD LGGTDEFSTEELEDRLAK QVIFHEGESSIN SKSSAQTRRSVRQSTRSDSSDSE
Sbjct: 154 VGFDELGGTDEFSTEELEDRLAKCQVIFHEGESSINTSKSSAQTRRSVRQSTRSDSSDSE 213

[Close]

BLAST of BhiUN316G44 vs. TrEMBL
Match: tr|A0A2P5DN88|A0A2P5DN88_PARAD (Thioredoxin domain-containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_048100 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.1e-16
Identity = 51/60 (85.00%), Postives = 56/60 (93.33%), Query Frame = 0


Query: 1   VGFDGLGGTDEFSTEELEDRLAKSQVIFHEGESSINASKSSAQTRRSVRQSTRSDSSDSE 60
           VGFD LGGTDEFSTEELE+RLAKSQVIF EGESS+N+SKS+A TRRSVRQST+ DSSDSE
Sbjct: 154 VGFDELGGTDEFSTEELEERLAKSQVIFFEGESSVNSSKSAAHTRRSVRQSTKPDSSDSE 213

[Close]

BLAST of BhiUN316G44 vs. TrEMBL
Match: tr|A0A2P5EYL3|A0A2P5EYL3_9ROSA (Thioredoxin domain-containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_136670 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.8e-15
Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 0


Query: 1   VGFDGLGGTDEFSTEELEDRLAKSQVIFHEGESSINASKSSAQTRRSVRQSTRSDSSDSE 60
           VGFD LGG DEFSTEELE+RLAKSQVIF EGESS+N+SKSSA TRR+VRQST  DSSDSE
Sbjct: 154 VGFDELGGKDEFSTEELEERLAKSQVIFFEGESSVNSSKSSAHTRRNVRQSTNPDSSDSE 213

[Close]

BLAST of BhiUN316G44 vs. TrEMBL
Match: tr|W9RH59|W9RH59_9ROSA (Thioredoxin domain-containing protein 9-like protein OS=Morus notabilis OX=981085 GN=L484_011499 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.0e-15
Identity = 49/60 (81.67%), Postives = 54/60 (90.00%), Query Frame = 0


Query: 1   VGFDGLGGTDEFSTEELEDRLAKSQVIFHEGESSINASKSSAQTRRSVRQSTRSDSSDSE 60
           VGFD LGGTDEFSTE+LE+RLAK+QVIF EGESS+NASKS A +RRSVRQST  DSSDSE
Sbjct: 154 VGFDELGGTDEFSTEDLEERLAKAQVIFFEGESSLNASKSGAHSRRSVRQSTNPDSSDSE 213

[Close]

BLAST of BhiUN316G44 vs. NCBI nr
Match: XP_011650010.1 (PREDICTED: thioredoxin domain-containing protein 9 homolog [Cucumis sativus] >KGN63261.1 hypothetical protein Csa_2G418960 [Cucumis sativus])

HSP 1 Score: 102.4 bits (254), Expect = 5.3e-19
Identity = 57/60 (95.00%), Postives = 57/60 (95.00%), Query Frame = 0


Query: 1   VGFDGLGGTDEFSTEELEDRLAKSQVIFHEGESSINASKSSAQTRRSVRQSTRSDSSDSE 60
           VGFD LGGTDEFSTEELEDRLAK QVIFHEGESSIN SKSSAQTRRSVRQSTRSDSSDSE
Sbjct: 154 VGFDELGGTDEFSTEELEDRLAKCQVIFHEGESSINTSKSSAQTRRSVRQSTRSDSSDSE 213

[Close]

BLAST of BhiUN316G44 vs. NCBI nr
Match: XP_008455854.1 (PREDICTED: thioredoxin domain-containing protein 9 homolog [Cucumis melo] >XP_008455855.1 PREDICTED: thioredoxin domain-containing protein 9 homolog [Cucumis melo])

HSP 1 Score: 102.4 bits (254), Expect = 5.3e-19
Identity = 57/60 (95.00%), Postives = 57/60 (95.00%), Query Frame = 0


Query: 1   VGFDGLGGTDEFSTEELEDRLAKSQVIFHEGESSINASKSSAQTRRSVRQSTRSDSSDSE 60
           VGFD LGGTDEFSTEELEDRLAK QVIFHEGESSIN SKSSAQTRRSVRQSTRSDSSDSE
Sbjct: 154 VGFDELGGTDEFSTEELEDRLAKCQVIFHEGESSINTSKSSAQTRRSVRQSTRSDSSDSE 213

[Close]

BLAST of BhiUN316G44 vs. NCBI nr
Match: XP_022944636.1 (thioredoxin domain-containing protein 9 homolog [Cucurbita moschata] >XP_022944637.1 thioredoxin domain-containing protein 9 homolog [Cucurbita moschata] >XP_022944638.1 thioredoxin domain-containing protein 9 homolog [Cucurbita moschata] >XP_022986377.1 thioredoxin domain-containing protein 9 homolog [Cucurbita maxima] >XP_022986378.1 thioredoxin domain-containing protein 9 homolog [Cucurbita maxima] >XP_022986379.1 thioredoxin domain-containing protein 9 homolog [Cucurbita maxima] >XP_022986380.1 thioredoxin domain-containing protein 9 homolog [Cucurbita maxima] >XP_022986381.1 thioredoxin domain-containing protein 9 homolog [Cucurbita maxima])

HSP 1 Score: 99.0 bits (245), Expect = 5.9e-18
Identity = 55/60 (91.67%), Postives = 58/60 (96.67%), Query Frame = 0


Query: 1   VGFDGLGGTDEFSTEELEDRLAKSQVIFHEGESSINASKSSAQTRRSVRQSTRSDSSDSE 60
           VGFD LGGTDEFSTEELE+RLAK QVIF+EGESSINASKS+AQTRRSVRQSTRSDSSDSE
Sbjct: 154 VGFDELGGTDEFSTEELEERLAKCQVIFYEGESSINASKSNAQTRRSVRQSTRSDSSDSE 213

[Close]

BLAST of BhiUN316G44 vs. NCBI nr
Match: XP_023514797.1 (thioredoxin domain-containing protein 9 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 99.0 bits (245), Expect = 5.9e-18
Identity = 55/60 (91.67%), Postives = 58/60 (96.67%), Query Frame = 0


Query: 1   VGFDGLGGTDEFSTEELEDRLAKSQVIFHEGESSINASKSSAQTRRSVRQSTRSDSSDSE 60
           VGFD LGGTDEFSTEELE+RLAKSQVIF+EGESSINASKSSAQTRRSVRQS R+DSSDSE
Sbjct: 154 VGFDELGGTDEFSTEELEERLAKSQVIFYEGESSINASKSSAQTRRSVRQSARADSSDSE 213

[Close]

BLAST of BhiUN316G44 vs. NCBI nr
Match: XP_023513333.1 (thioredoxin domain-containing protein 9 homolog [Cucurbita pepo subsp. pepo] >XP_023513334.1 thioredoxin domain-containing protein 9 homolog [Cucurbita pepo subsp. pepo] >XP_023513335.1 thioredoxin domain-containing protein 9 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-17
Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 0


Query: 1   VGFDGLGGTDEFSTEELEDRLAKSQVIFHEGESSINASKSSAQTRRSVRQSTRSDSSDSE 60
           VGFD LGGTDEFSTEELE+RLAK QVIF++GESSINASKS+AQTRRSVRQSTRSDSSDSE
Sbjct: 154 VGFDELGGTDEFSTEELEERLAKCQVIFYDGESSINASKSNAQTRRSVRQSTRSDSSDSE 213

The following BLAST results are available for this feature:

BLAST of BhiUN316G44 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G18990.1	1.0e-11	63.33	thioredoxin domain-containing protein 9 homolog	[more]
AT3G25580.1	1.0e-11	65.00	Thioredoxin superfamily protein	[more]

BLAST of BhiUN316G44 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O64628\|TXND9_ARATH	1.8e-10	63.33	Thioredoxin domain-containing protein 9 homolog OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of BhiUN316G44 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C206\|A0A1S3C206_CUCME	3.5e-19	95.00	thioredoxin domain-containing protein 9 homolog OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0LT99\|A0A0A0LT99_CUCSA	3.5e-19	95.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418960 PE=4 SV=1	[more]
tr\|A0A2P5DN88\|A0A2P5DN88_PARAD	2.1e-16	85.00	Thioredoxin domain-containing protein OS=Parasponia andersonii OX=3476 GN=PanWU0...	[more]
tr\|A0A2P5EYL3\|A0A2P5EYL3_9ROSA	1.8e-15	83.33	Thioredoxin domain-containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02...	[more]
tr\|W9RH59\|W9RH59_9ROSA	4.0e-15	81.67	Thioredoxin domain-containing protein 9-like protein OS=Morus notabilis OX=98108...	[more]

BLAST of BhiUN316G44 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650010.1	5.3e-19	95.00	PREDICTED: thioredoxin domain-containing protein 9 homolog [Cucumis sativus] >KG...	[more]
XP_008455854.1	5.3e-19	95.00	PREDICTED: thioredoxin domain-containing protein 9 homolog [Cucumis melo] >XP_00...	[more]
XP_022944636.1	5.9e-18	91.67	thioredoxin domain-containing protein 9 homolog [Cucurbita moschata] >XP_0229446...	[more]
XP_023514797.1	5.9e-18	91.67	thioredoxin domain-containing protein 9 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_023513333.1	1.3e-17	90.00	thioredoxin domain-containing protein 9 homolog [Cucurbita pepo subsp. pepo] >XP...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0005623	cell

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
BhiUN316M44	BhiUN316M44	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..60

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
BhiUN316G44	Cucumber (Gy14) v1	cgywgoB258
BhiUN316G44	Cucumber (Gy14) v2	cgybwgoB023
BhiUN316G44	Cucurbita maxima (Rimu)	cmawgoB0250
BhiUN316G44	Cucurbita moschata (Rifu)	cmowgoB0243
BhiUN316G44	Cucurbita pepo (Zucchini)	cpewgoB0634
BhiUN316G44	Wild cucumber (PI 183967)	cpiwgoB026
BhiUN316G44	Cucumber (Chinese Long) v3	cucwgoB029
BhiUN316G44	Cucumber (Chinese Long) v2	cuwgoB026
BhiUN316G44	Bottle gourd (USVL1VR-Ls)	lsiwgoB236
BhiUN316G44	Melon (DHL92) v3.6.1	medwgoB162
BhiUN316G44	Melon (DHL92) v3.5.1	mewgoB159
BhiUN316G44	Watermelon (Charleston Gray)	wcgwgoB338
BhiUN316G44	Watermelon (97103) v2	wgowmbB448
BhiUN316G44	Watermelon (97103) v1	wgowmB465
BhiUN316G44	Silver-seed gourd	carwgoB1176