Bhi12G001348 (gene) Wax gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATATTTCCAACTACGTTGTATTGGAGATTTTGAGTCGAGTTCCCCTACCTAAAGGTGGAAAAATACGAGTTCTCTCGAAATTTCATGCCAAAGCTAGCTATGGTTCTTACTATAAAGATTTAGTTGCACAACATCACCATGGACCCTTCTTAGATGGCTTCCTCCTTCAAAGACTTGGCCATGAAAATTGTTTATCCTTTATTTCTCTACAACCCAACTTTTTCCCCTTGGATTTGTCGTTTAGTTTCCTCCCGGGACGTGACGTTCAAATTCGAGCCGTTGCTCCCAATGGTCTTCTTTTATGTGAAATCCGACACCCAATCCGTTACAGACAGTGTTTTTACACCATTTGCAAACTTTCTACACAACAATGGAAAG ATGGATATTTCCAACTACGTTGTATTGGAGATTTTGAGTCGAGTTCCCCTACCTAAAGGTGGAAAAATACGAGTTCTCTCGAAATTTCATGCCAAAGCTAGCTATGGTTCTTACTATAAAGATTTAGTTGCACAACATCACCATGGACCCTTCTTAGATGGCTTCCTCCTTCAAAGACTTGGCCATGAAAATTGTTTATCCTTTATTTCTCTACAACCCAACTTTTTCCCCTTGGATTTGTCGTTTAGTTTCCTCCCGGGACGTGACGTTCAAATTCGAGCCGTTGCTCCCAATGGTCTTCTTTTATGTGAAATCCGACACCCAATCCGTTACAGACAGTGTTTTTACACCATTTGCAAACTTTCTACACAACAATGGAAAG ATGGATATTTCCAACTACGTTGTATTGGAGATTTTGAGTCGAGTTCCCCTACCTAAAGGTGGAAAAATACGAGTTCTCTCGAAATTTCATGCCAAAGCTAGCTATGGTTCTTACTATAAAGATTTAGTTGCACAACATCACCATGGACCCTTCTTAGATGGCTTCCTCCTTCAAAGACTTGGCCATGAAAATTGTTTATCCTTTATTTCTCTACAACCCAACTTTTTCCCCTTGGATTTGTCGTTTAGTTTCCTCCCGGGACGTGACGTTCAAATTCGAGCCGTTGCTCCCAATGGTCTTCTTTTATGTGAAATCCGACACCCAATCCGTTACAGACAGTGTTTTTACACCATTTGCAAACTTTCTACACAACAATGGAAAG MDISNYVVLEILSRVPLPKGGKIRVLSKFHAKASYGSYYKDLVAQHHHGPFLDGFLLQRLGHENCLSFISLQPNFFPLDLSFSFLPGRDVQIRAVAPNGLLLCEIRHPIRYRQCFYTICKLSTQQWK
BLAST of Bhi12G001348 vs. TAIR10
Match: AT2G05360.1 (BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein (TAIR:AT1G64295.1)) HSP 1 Score: 47.8 bits (112), Expect = 6.0e-06 Identity = 36/123 (29.27%), Postives = 66/123 (53.66%), Query Frame = 0
BLAST of Bhi12G001348 vs. TrEMBL
Match: tr|A0A1S3B7Y4|A0A1S3B7Y4_CUCME (F-box protein At5g49610-like OS=Cucumis melo OX=3656 GN=LOC103487156 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 5.1e-28 Identity = 73/133 (54.89%), Postives = 93/133 (69.92%), Query Frame = 0
BLAST of Bhi12G001348 vs. TrEMBL
Match: tr|A0A0A0LBP1|A0A0A0LBP1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G785420 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 3.4e-24 Identity = 71/133 (53.38%), Postives = 90/133 (67.67%), Query Frame = 0
BLAST of Bhi12G001348 vs. TrEMBL
Match: tr|U7E0Y1|U7E0Y1_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa OX=3694 GN=POPTR_0143s00210g PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 6.1e-05 Identity = 38/127 (29.92%), Postives = 65/127 (51.18%), Query Frame = 0
BLAST of Bhi12G001348 vs. TrEMBL
Match: tr|A0A061GMD8|A0A061GMD8_THECC (F-box associated ubiquitination effector family protein, putative OS=Theobroma cacao OX=3641 GN=TCM_037569 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.3e-04 Identity = 44/128 (34.38%), Postives = 64/128 (50.00%), Query Frame = 0
BLAST of Bhi12G001348 vs. TrEMBL
Match: tr|W9RY39|W9RY39_9ROSA (F-box protein OS=Morus notabilis OX=981085 GN=L484_014172 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 4.0e-04 Identity = 44/127 (34.65%), Postives = 64/127 (50.39%), Query Frame = 0
BLAST of Bhi12G001348 vs. NCBI nr
Match: XP_008443600.1 (PREDICTED: F-box protein At5g49610-like [Cucumis melo]) HSP 1 Score: 132.9 bits (333), Expect = 7.8e-28 Identity = 73/133 (54.89%), Postives = 93/133 (69.92%), Query Frame = 0
BLAST of Bhi12G001348 vs. NCBI nr
Match: XP_022983376.1 (F-box protein At5g49610-like [Cucurbita maxima]) HSP 1 Score: 131.3 bits (329), Expect = 2.3e-27 Identity = 70/132 (53.03%), Postives = 90/132 (68.18%), Query Frame = 0
BLAST of Bhi12G001348 vs. NCBI nr
Match: XP_023528881.1 (F-box protein At5g49610-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 127.1 bits (318), Expect = 4.3e-26 Identity = 68/132 (51.52%), Postives = 90/132 (68.18%), Query Frame = 0
BLAST of Bhi12G001348 vs. NCBI nr
Match: XP_022934602.1 (F-box protein At5g49610-like [Cucurbita moschata]) HSP 1 Score: 126.3 bits (316), Expect = 7.3e-26 Identity = 68/132 (51.52%), Postives = 90/132 (68.18%), Query Frame = 0
BLAST of Bhi12G001348 vs. NCBI nr
Match: XP_004136723.1 (PREDICTED: F-box protein At5g49610 [Cucumis sativus] >KGN59248.1 hypothetical protein Csa_3G785420 [Cucumis sativus]) HSP 1 Score: 120.2 bits (300), Expect = 5.2e-24 Identity = 71/133 (53.38%), Postives = 90/133 (67.67%), Query Frame = 0
The following BLAST results are available for this feature:
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |