Bhi11G001997 (gene) Wax gourd

NameBhi11G001997
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr11 : 65034565 .. 65034795 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAACGTCGAAGGCGCCGGCAAGGGTCTCACCGTTGAACTCTGCAAGGTCCTCGCCACTTCATGTTAACCTTTGGCCCGATGAGGAGCTTGAGAAAGGTGGTGAGAAGGCAACAGGCACAGCTGCGGCCGTGGCCATGGCGGTGGTAGGTCTTTGCCGGAGGAGGATGATACGCGGAGTGGATGTTTTGTACGAACTTTCTCATTCGCATTTTTGCATTCTTTTTTAG

mRNA sequence

ATGTTAACGTCGAAGGCGCCGGCAAGGGTCTCACCGTTGAACTCTGCAAGGTCCTCGCCACTTCATGTTAACCTTTGGCCCGATGAGGAGCTTGAGAAAGGTGGTGAGAAGGCAACAGGCACAGCTGCGGCCGTGGCCATGGCGGTGGTAGGTCTTTGCCGGAGGAGGATGATACGCGGAGTGGATGTTTTGTACGAACTTTCTCATTCGCATTTTTGCATTCTTTTTTAG

Coding sequence (CDS)

ATGTTAACGTCGAAGGCGCCGGCAAGGGTCTCACCGTTGAACTCTGCAAGGTCCTCGCCACTTCATGTTAACCTTTGGCCCGATGAGGAGCTTGAGAAAGGTGGTGAGAAGGCAACAGGCACAGCTGCGGCCGTGGCCATGGCGGTGGTAGGTCTTTGCCGGAGGAGGATGATACGCGGAGTGGATGTTTTGTACGAACTTTCTCATTCGCATTTTTGCATTCTTTTTTAG

Protein sequence

MLTSKAPARVSPLNSARSSPLHVNLWPDEELEKGGEKATGTAAAVAMAVVGLCRRRMIRGVDVLYELSHSHFCILF
BLAST of Bhi11G001997 vs. TrEMBL
Match: tr|A0A0A0LER2|A0A0A0LER2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G779015 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.3e-04
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 0

Query: 28 DEELEKGGEKATGTAAAVAMAVVGLCRRRMIRGVDVLYEL 68
          DEELEKGGEKA G A+AVA+A+VGLCRRR  R V    E+
Sbjct: 43 DEELEKGGEKAAGAASAVAVAMVGLCRRRDGRAVKGAVEM 82

BLAST of Bhi11G001997 vs. NCBI nr
Match: KGN59197.1 (hypothetical protein Csa_3G779015 [Cucumis sativus])

HSP 1 Score: 52.4 bits (124), Expect = 8.0e-04
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 0

Query: 28 DEELEKGGEKATGTAAAVAMAVVGLCRRRMIRGVDVLYEL 68
          DEELEKGGEKA G A+AVA+A+VGLCRRR  R V    E+
Sbjct: 43 DEELEKGGEKAAGAASAVAVAMVGLCRRRDGRAVKGAVEM 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LER2|A0A0A0LER2_CUCSA5.3e-0467.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G779015 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KGN59197.18.0e-0467.50hypothetical protein Csa_3G779015 [Cucumis sativus][more]

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M001997Bhi11M001997mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21