Bhi11G000862 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi11G000862
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	proline-rich receptor-like protein kinase PERK2
Location	chr11 : 30933245 .. 30933601 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCTTCCAAGTTCTTGATCATTGCCTTCATGGCTACTTTGGCTCTTTCGAGCATCGACCTCGGCCAAGCTGCCCGCCATCTTTTGCAAACGGCTCCGCCCTTGGTGCCAAACCTTCCGGTGATTCCAACCGGGATACCGCCGTTGCCGACCTTGCCAAACCCTACTACTCTTCCAAATTTACCACAACCCACCTTGCCTAAAGTTAATCTCCCTCCGCTTCCGAGCGGGCTAGCGCTGCCACCGCTCCCGACAATGGCACTTCCGAACTTCCCGTCAATCCCTACCATTCCAACTTCATTTCCTTCCATCCCATTTTTATCTCCTCCTCCTGCAACTTCTTCTTCCCCATAA

mRNA sequence

ATGGGTTCTTCCAAGTTCTTGATCATTGCCTTCATGGCTACTTTGGCTCTTTCGAGCATCGACCTCGGCCAAGCTGCCCGCCATCTTTTGCAAACGGCTCCGCCCTTGGTGCCAAACCTTCCGGTGATTCCAACCGGGATACCGCCGTTGCCGACCTTGCCAAACCCTACTACTCTTCCAAATTTACCACAACCCACCTTGCCTAAAGTTAATCTCCCTCCGCTTCCGAGCGGGCTAGCGCTGCCACCGCTCCCGACAATGGCACTTCCGAACTTCCCGTCAATCCCTACCATTCCAACTTCATTTCCTTCCATCCCATTTTTATCTCCTCCTCCTGCAACTTCTTCTTCCCCATAA

Coding sequence (CDS)

ATGGGTTCTTCCAAGTTCTTGATCATTGCCTTCATGGCTACTTTGGCTCTTTCGAGCATCGACCTCGGCCAAGCTGCCCGCCATCTTTTGCAAACGGCTCCGCCCTTGGTGCCAAACCTTCCGGTGATTCCAACCGGGATACCGCCGTTGCCGACCTTGCCAAACCCTACTACTCTTCCAAATTTACCACAACCCACCTTGCCTAAAGTTAATCTCCCTCCGCTTCCGAGCGGGCTAGCGCTGCCACCGCTCCCGACAATGGCACTTCCGAACTTCCCGTCAATCCCTACCATTCCAACTTCATTTCCTTCCATCCCATTTTTATCTCCTCCTCCTGCAACTTCTTCTTCCCCATAA

Protein sequence

MGSSKFLIIAFMATLALSSIDLGQAARHLLQTAPPLVPNLPVIPTGIPPLPTLPNPTTLPNLPQPTLPKVNLPPLPSGLALPPLPTMALPNFPSIPTIPTSFPSIPFLSPPPATSSSP

Homology

[Close]

BLAST of Bhi11G000862 vs. TrEMBL
Match: tr|A0A1S3CJJ1|A0A1S3CJJ1_CUCME (proline-rich receptor-like protein kinase PERK2 OS=Cucumis melo OX=3656 GN=LOC103501166 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 5.0e-09
Identity = 36/40 (90.00%), Postives = 37/40 (92.50%), Query Frame = 0


Query: 1  MGSSKFLIIAFMATLALSSIDLGQAARHLLQTAPPLVPNL 41
          M SSKFLIIAFMATLALSSI+ GQAARHLLQT PPLVPNL
Sbjct: 1  MASSKFLIIAFMATLALSSINFGQAARHLLQTTPPLVPNL 40

[Close]

BLAST of Bhi11G000862 vs. TrEMBL
Match: tr|A0A0A0L1Y3|A0A0A0L1Y3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374890 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.3e-06
Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 0


Query: 1  MGSSKFLIIAFMATLALSSIDLGQAARHLLQTAPPLVPNL 41
          M +S+FLIIAF ATLALSSI+ G AARHL QT PPLVPNL
Sbjct: 1  MATSRFLIIAFTATLALSSINFGHAARHLSQTTPPLVPNL 40

[Close]

BLAST of Bhi11G000862 vs. NCBI nr
Match: XP_008462893.1 (PREDICTED: proline-rich receptor-like protein kinase PERK2 [Cucumis melo])

HSP 1 Score: 69.7 bits (169), Expect = 7.5e-09
Identity = 36/40 (90.00%), Postives = 37/40 (92.50%), Query Frame = 0


Query: 1  MGSSKFLIIAFMATLALSSIDLGQAARHLLQTAPPLVPNL 41
          M SSKFLIIAFMATLALSSI+ GQAARHLLQT PPLVPNL
Sbjct: 1  MASSKFLIIAFMATLALSSINFGQAARHLLQTTPPLVPNL 40

[Close]

BLAST of Bhi11G000862 vs. NCBI nr
Match: XP_023552884.1 (protein PELPK1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 61.6 bits (148), Expect = 2.0e-06
Identity = 32/37 (86.49%), Postives = 34/37 (91.89%), Query Frame = 0


Query: 1  MGSSKFLIIAFMATLALSSIDLGQAARHLLQTAPPLV 38
          M SSKFLIIAFMATLALSSID+GQAARHLLQ  PPL+
Sbjct: 1  MTSSKFLIIAFMATLALSSIDMGQAARHLLQITPPLL 37

[Close]

BLAST of Bhi11G000862 vs. NCBI nr
Match: KGN54597.1 (hypothetical protein Csa_4G374890 [Cucumis sativus])

HSP 1 Score: 60.8 bits (146), Expect = 3.5e-06
Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 0


Query: 1  MGSSKFLIIAFMATLALSSIDLGQAARHLLQTAPPLVPNL 41
          M +S+FLIIAF ATLALSSI+ G AARHL QT PPLVPNL
Sbjct: 1  MATSRFLIIAFTATLALSSINFGHAARHLSQTTPPLVPNL 40

[Close]

BLAST of Bhi11G000862 vs. NCBI nr
Match: XP_022149166.1 (proline-rich receptor-like protein kinase PERK2 [Momordica charantia])

HSP 1 Score: 55.5 bits (132), Expect = 1.5e-04
Identity = 30/40 (75.00%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 1  MGSSKFLIIA-FMATLALSSIDLGQAARHLLQTAPPLVPN 40
          M SSKFLIIA FM  LALSS+D  +AARHLLQTAPP +PN
Sbjct: 1  MASSKFLIIALFMVALALSSVDAARAARHLLQTAPPSLPN 40

[Close]

BLAST of Bhi11G000862 vs. NCBI nr
Match: XP_023518061.1 (protein PELPK1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 54.7 bits (130), Expect = 2.5e-04
Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 0


Query: 1  MGSSKFLIIAFMATLALSSIDLGQAARHLLQTAPP 36
          M SSK+LIIAFM TL  S+ID G+AARHLLQTAPP
Sbjct: 1  MASSKYLIIAFMVTLMFSAIDTGRAARHLLQTAPP 35

The following BLAST results are available for this feature:

BLAST of Bhi11G000862 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi11G000862 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi11G000862 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CJJ1\|A0A1S3CJJ1_CUCME	5.0e-09	90.00	proline-rich receptor-like protein kinase PERK2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0L1Y3\|A0A0A0L1Y3_CUCSA	2.3e-06	77.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374890 PE=4 SV=1	[more]

BLAST of Bhi11G000862 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462893.1	7.5e-09	90.00	PREDICTED: proline-rich receptor-like protein kinase PERK2 [Cucumis melo]	[more]
XP_023552884.1	2.0e-06	86.49	protein PELPK1-like [Cucurbita pepo subsp. pepo]	[more]
KGN54597.1	3.5e-06	77.50	hypothetical protein Csa_4G374890 [Cucumis sativus]	[more]
XP_022149166.1	1.5e-04	75.00	proline-rich receptor-like protein kinase PERK2 [Momordica charantia]	[more]
XP_023518061.1	2.5e-04	77.14	protein PELPK1-like [Cucurbita pepo subsp. pepo]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M000862	Bhi11M000862	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33088	FAMILY NOT NAMED	coord: 1..113
None	No IPR available	PANTHER	PTHR33088:SF5	SUBFAMILY NOT NAMED	coord: 1..113

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi11G000862	ClCG10G009570	Watermelon (Charleston Gray)	wcgwgoB078
Bhi11G000862	Cla006500	Watermelon (97103) v1	wgowmB007
Bhi11G000862	Cla97C10G192650	Watermelon (97103) v2	wgowmbB001

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi11G000862	Cucumber (Gy14) v1	cgywgoB443
Bhi11G000862	Cucumber (Gy14) v2	cgybwgoB619
Bhi11G000862	Cucurbita maxima (Rimu)	cmawgoB0410
Bhi11G000862	Cucurbita maxima (Rimu)	cmawgoB0634
Bhi11G000862	Cucurbita maxima (Rimu)	cmawgoB0814
Bhi11G000862	Cucurbita moschata (Rifu)	cmowgoB0405
Bhi11G000862	Cucurbita moschata (Rifu)	cmowgoB0635
Bhi11G000862	Cucurbita moschata (Rifu)	cmowgoB0810
Bhi11G000862	Cucurbita pepo (Zucchini)	cpewgoB0266
Bhi11G000862	Cucurbita pepo (Zucchini)	cpewgoB0311
Bhi11G000862	Cucurbita pepo (Zucchini)	cpewgoB0477
Bhi11G000862	Wild cucumber (PI 183967)	cpiwgoB659
Bhi11G000862	Cucumber (Chinese Long) v3	cucwgoB674
Bhi11G000862	Cucumber (Chinese Long) v2	cuwgoB651
Bhi11G000862	Bottle gourd (USVL1VR-Ls)	lsiwgoB292
Bhi11G000862	Melon (DHL92) v3.6.1	medwgoB200
Bhi11G000862	Melon (DHL92) v3.5.1	mewgoB198
Bhi11G000862	Watermelon (Charleston Gray)	wcgwgoB010
Bhi11G000862	Watermelon (97103) v2	wgowmbB049
Bhi11G000862	Silver-seed gourd	carwgoB0375
Bhi11G000862	Silver-seed gourd	carwgoB0381
Bhi11G000862	Silver-seed gourd	carwgoB0456