Bhi11G000113 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi11G000113
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Receptor-type tyrosine-protein phosphatase U
Location	chr11 : 2944520 .. 2944841 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTTTTGATGACGACTTCAATTGGAAGGGTAACGAGAATCACTTGCAGAATTTCATCAAATACAAGGAGGTTTTCAAAGATTTGCCTCTCAATTTGAAAGGGTGGTTGGTGTTTAGAAATGGTGTTGCGATTGGTTTCGATGATAGTGAAGATTTGGAATTCGAAATTAGTGTTGATTCTGATGATTTGGAGGAGAAAGAAGAGGAAGAAAAGGAAGAGGGGGATGAAGATTTGAAAAGGAGAGAACAAGGCGAGGGAAAAGTTGATGAACATGGTGGTGGTCATGAAGTGGTGGTAGTCGTCGGAGATGAAGGATTTTAA

mRNA sequence

GGTTTTTGATGACGACTTCAATTGGAAGGGTAACGAGAATCACTTGCAGAATTTCATCAAATACAAGGAGGTTTTCAAAGATTTGCCTCTCAATTTGAAAGGGTGGTTGGTGTTTAGAAATGGTGTTGCGATTGGTTTCGATGATAGTGAAGATTTGGAATTCGAAATTAGTGTTGATTCTGATGATTTGGAGGAGAAAGAAGAGGAAGAAAAGGAAGAGGGGGATGAAGATTTGAAAAGGAGAGAACAAGGCGAGGGAAAAGTTGATGAACATGGTGGTGGTCATGAAGTGGTGGTAGTCGTCGGAGATGAAGGATTTTAA

Coding sequence (CDS)

GGTTTTTGATGACGACTTCAATTGGAAGGGTAACGAGAATCACTTGCAGAATTTCATCAAATACAAGGAGGTTTTCAAAGATTTGCCTCTCAATTTGAAAGGGTGGTTGGTGTTTAGAAATGGTGTTGCGATTGGTTTCGATGATAGTGAAGATTTGGAATTCGAAATTAGTGTTGATTCTGATGATTTGGAGGAGAAAGAAGAGGAAGAAAAGGAAGAGGGGGATGAAGATTTGAAAAGGAGAGAACAAGGCGAGGGAAAAGTTGATGAACATGGTGGTGGTCATGAAGTGGTGGTAGTCGTCGGAGATGAAGGATTTTAA

Protein sequence

VFDDDFNWKGNENHLQNFIKYKEVFKDLPLNLKGWLVFRNGVAIGFDDSEDLEFEISVDSDDLEEKEEEEKEEGDEDLKRREQGEGKVDEHGGGHEVVVVVGDEGF

Homology

[Close]

BLAST of Bhi11G000113 vs. TrEMBL
Match: tr|A0A0A0LB45|A0A0A0LB45_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G365940 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.0e-13
Identity = 70/106 (66.04%), Postives = 76/106 (71.70%), Query Frame = 0


Query: 1   VFDDDFNWKGNENHLQNFIKYKEVFKDLPLNLKG-WLVFRNGVAIGFDDSEDLEFEISVD 60
           V DDDFNWK  ENH QNF+KYK+VF DLPL+LKG  LVF NG A+ FD SEDLEF     
Sbjct: 85  VSDDDFNWKDGENHWQNFMKYKQVFGDLPLDLKGKRLVFGNGAAVDFDGSEDLEF---XX 144

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXKVDEHGGGHEVVVVVGDEG 106
           XXXXXXXXXXXXXXXXXXX        K   H GG +VV VVG+EG
Sbjct: 145 XXXXXXXXXXXXXXXXXXXKGREHGRRKHPGHRGGPQVVEVVGNEG 187

[Close]

BLAST of Bhi11G000113 vs. TrEMBL
Match: tr|A0A251Q0Q8|A0A251Q0Q8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G158400 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.9e-04
Identity = 27/56 (48.21%), Postives = 34/56 (60.71%), Query Frame = 0


Query: 1   VFDDDFNWKGNENHLQNFIKYKEVFKDLPLNLKGWLVFRNGVAIGFDDSEDLEFEI 57
           V  D+FNWK  ENH +NF+KYKEVF D+ L++KG     +     F D  DL F I
Sbjct: 85  VSKDEFNWKDGENHWENFLKYKEVFGDVELDVKGKRACESESLDVFGDCGDLGFGI 140

[Close]

BLAST of Bhi11G000113 vs. TrEMBL
Match: tr|M5WU19|M5WU19_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa007139mg PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.9e-04
Identity = 27/56 (48.21%), Postives = 34/56 (60.71%), Query Frame = 0


Query: 1   VFDDDFNWKGNENHLQNFIKYKEVFKDLPLNLKGWLVFRNGVAIGFDDSEDLEFEI 57
           V  D+FNWK  ENH +NF+KYKEVF D+ L++KG     +     F D  DL F I
Sbjct: 63  VSKDEFNWKDGENHWENFLKYKEVFGDVELDVKGKRACESESLDVFGDCGDLGFGI 118

[Close]

BLAST of Bhi11G000113 vs. TrEMBL
Match: tr|A0A2H5NUH3|A0A2H5NUH3_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_077220 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.9e-04
Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 1   VFDDDFNWKGNENHLQNFIKYKEVFKDLPLNLKGWLVFRNGVAIGFDDSEDL 53
           + DD+FNWK  ENH +NF+KYKEVF D+ L +KG  V    +   F+D  DL
Sbjct: 85  ISDDEFNWKDGENHWENFLKYKEVFGDVELEVKGKRVSNGDL---FEDCCDL 133

[Close]

BLAST of Bhi11G000113 vs. TrEMBL
Match: tr|A0A1S8ABS0|A0A1S8ABS0_CITLI (Uncharacterized protein OS=Citrus limon OX=2708 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.9e-04
Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 1   VFDDDFNWKGNENHLQNFIKYKEVFKDLPLNLKGWLVFRNGVAIGFDDSEDL 53
           + DD+FNWK  ENH +NF+KYKEVF D+ L +KG  V    +   F+D  DL
Sbjct: 85  ISDDEFNWKDGENHWENFLKYKEVFGDVELEVKGKRVSNGDL---FEDCCDL 133

[Close]

BLAST of Bhi11G000113 vs. NCBI nr
Match: XP_022998272.1 (uncharacterized protein KIAA1211 homolog [Cucurbita maxima])

HSP 1 Score: 85.5 bits (210), Expect = 1.2e-13
Identity = 70/106 (66.04%), Postives = 76/106 (71.70%), Query Frame = 0


Query: 1   VFDDDFNWKGNENHLQNFIKYKEVFKDLPLNLKG-WLVFRNGVAIGFDDSEDLEFEISVD 60
           V DDDFNWK  ENH QNF+KYKEVF D PL+LKG  LVF N  A+GFD SED EF I VD
Sbjct: 85  VSDDDFNWKDGENHWQNFMKYKEVFGDFPLDLKGKRLVFGNAAAVGFDGSEDSEFGIGVD 144

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXKVDEHGGGHEVVVVVGDEG 106
           XXXXXXXXXXXXXXXXXXXX          + GGG E V  +G+EG
Sbjct: 145 XXXXXXXXXXXXXXXXXXXXGG------AKDDGGGREPVEAIGNEG 184

[Close]

BLAST of Bhi11G000113 vs. NCBI nr
Match: XP_011651431.1 (PREDICTED: uncharacterized protein KIAA1211 homolog [Cucumis sativus] >KGN57887.1 hypothetical protein Csa_3G365940 [Cucumis sativus])

HSP 1 Score: 83.6 bits (205), Expect = 4.5e-13
Identity = 70/106 (66.04%), Postives = 76/106 (71.70%), Query Frame = 0


Query: 1   VFDDDFNWKGNENHLQNFIKYKEVFKDLPLNLKG-WLVFRNGVAIGFDDSEDLEFEISVD 60
           V DDDFNWK  ENH QNF+KYK+VF DLPL+LKG  LVF NG A+ FD SEDLEF     
Sbjct: 85  VSDDDFNWKDGENHWQNFMKYKQVFGDLPLDLKGKRLVFGNGAAVDFDGSEDLEF---XX 144

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXKVDEHGGGHEVVVVVGDEG 106
           XXXXXXXXXXXXXXXXXXX        K   H GG +VV VVG+EG
Sbjct: 145 XXXXXXXXXXXXXXXXXXXKGREHGRRKHPGHRGGPQVVEVVGNEG 187

[Close]

BLAST of Bhi11G000113 vs. NCBI nr
Match: XP_022143404.1 (uncharacterized protein LOC111013283, partial [Momordica charantia])

HSP 1 Score: 74.3 bits (181), Expect = 2.7e-10
Identity = 38/57 (66.67%), Postives = 41/57 (71.93%), Query Frame = 0


Query: 3   DDDFNWKGNENHLQNFIKYKEVFKDLPLNLKGWLVFRNGVAIGFDDSEDLEFEISVD 60
           D  FNWK  ENH QNFIKYKEVF DLPL++KG  +F N    GFD SEDLEF I VD
Sbjct: 87  DHHFNWKDAENHWQNFIKYKEVFGDLPLDVKGKRLFGN----GFDGSEDLEFGIGVD 139

[Close]

BLAST of Bhi11G000113 vs. NCBI nr
Match: KDO63115.1 (hypothetical protein CISIN_1g043495mg [Citrus sinensis])

HSP 1 Score: 54.3 bits (129), Expect = 2.9e-04
Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 1   VFDDDFNWKGNENHLQNFIKYKEVFKDLPLNLKGWLVFRNGVAIGFDDSEDL 53
           + DD+FNWK  ENH +NF+KYKEVF D+ L +KG  V    +   F+D  DL
Sbjct: 85  ISDDEFNWKDGENHWENFLKYKEVFGDVELEVKGKRVSNGDL---FEDCCDL 133

[Close]

BLAST of Bhi11G000113 vs. NCBI nr
Match: GAY43786.1 (hypothetical protein CUMW_077220 [Citrus unshiu])

HSP 1 Score: 54.3 bits (129), Expect = 2.9e-04
Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 1   VFDDDFNWKGNENHLQNFIKYKEVFKDLPLNLKGWLVFRNGVAIGFDDSEDL 53
           + DD+FNWK  ENH +NF+KYKEVF D+ L +KG  V    +   F+D  DL
Sbjct: 85  ISDDEFNWKDGENHWENFLKYKEVFGDVELEVKGKRVSNGDL---FEDCCDL 133

The following BLAST results are available for this feature:

BLAST of Bhi11G000113 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi11G000113 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi11G000113 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LB45\|A0A0A0LB45_CUCSA	3.0e-13	66.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G365940 PE=4 SV=1	[more]
tr\|A0A251Q0Q8\|A0A251Q0Q8_PRUPE	1.9e-04	48.21	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G158400 PE=4 SV=1	[more]
tr\|M5WU19\|M5WU19_PRUPE	1.9e-04	48.21	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa007139mg PE=4 SV=1	[more]
tr\|A0A2H5NUH3\|A0A2H5NUH3_CITUN	1.9e-04	50.00	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_077220 PE=4 SV=1	[more]
tr\|A0A1S8ABS0\|A0A1S8ABS0_CITLI	1.9e-04	50.00	Uncharacterized protein OS=Citrus limon OX=2708 PE=4 SV=1	[more]

BLAST of Bhi11G000113 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022998272.1	1.2e-13	66.04	uncharacterized protein KIAA1211 homolog [Cucurbita maxima]	[more]
XP_011651431.1	4.5e-13	66.04	PREDICTED: uncharacterized protein KIAA1211 homolog [Cucumis sativus] >KGN57887....	[more]
XP_022143404.1	2.7e-10	66.67	uncharacterized protein LOC111013283, partial [Momordica charantia]	[more]
KDO63115.1	2.9e-04	50.00	hypothetical protein CISIN_1g043495mg [Citrus sinensis]	[more]
GAY43786.1	2.9e-04	50.00	hypothetical protein CUMW_077220 [Citrus unshiu]	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M000113	Bhi11M000113	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..72
None	No IPR available	PANTHER	PTHR37076:SF2	SUBFAMILY NOT NAMED	coord: 3..85
None	No IPR available	PANTHER	PTHR37076	FAMILY NOT NAMED	coord: 3..85

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi11G000113	Cucumber (Gy14) v1	cgywgoB622
Bhi11G000113	Cucumber (Gy14) v1	cgywgoB642
Bhi11G000113	Cucumber (Gy14) v2	cgybwgoB227
Bhi11G000113	Cucumber (Gy14) v2	cgybwgoB232
Bhi11G000113	Cucurbita maxima (Rimu)	cmawgoB0297
Bhi11G000113	Cucurbita maxima (Rimu)	cmawgoB0420
Bhi11G000113	Cucurbita maxima (Rimu)	cmawgoB0708
Bhi11G000113	Cucurbita maxima (Rimu)	cmawgoB0977
Bhi11G000113	Cucurbita moschata (Rifu)	cmowgoB0415
Bhi11G000113	Cucurbita moschata (Rifu)	cmowgoB0701
Bhi11G000113	Cucurbita moschata (Rifu)	cmowgoB0973
Bhi11G000113	Cucurbita pepo (Zucchini)	cpewgoB0277
Bhi11G000113	Cucurbita pepo (Zucchini)	cpewgoB0908
Bhi11G000113	Wild cucumber (PI 183967)	cpiwgoB239
Bhi11G000113	Wild cucumber (PI 183967)	cpiwgoB244
Bhi11G000113	Bottle gourd (USVL1VR-Ls)	lsiwgoB411
Bhi11G000113	Cucumber (Chinese Long) v3	cucwgoB242
Bhi11G000113	Cucumber (Chinese Long) v3	cucwgoB246
Bhi11G000113	Cucumber (Chinese Long) v2	cuwgoB237
Bhi11G000113	Cucumber (Chinese Long) v2	cuwgoB242
Bhi11G000113	Bottle gourd (USVL1VR-Ls)	lsiwgoB539
Bhi11G000113	Melon (DHL92) v3.6.1	medwgoB379
Bhi11G000113	Melon (DHL92) v3.6.1	medwgoB508
Bhi11G000113	Melon (DHL92) v3.5.1	mewgoB378
Bhi11G000113	Melon (DHL92) v3.5.1	mewgoB498
Bhi11G000113	Melon (DHL92) v3.5.1	mewgoB513
Bhi11G000113	Watermelon (Charleston Gray)	wcgwgoB013
Bhi11G000113	Watermelon (Charleston Gray)	wcgwgoB095
Bhi11G000113	Watermelon (Charleston Gray)	wcgwgoB411
Bhi11G000113	Watermelon (97103) v2	wgowmbB017
Bhi11G000113	Watermelon (97103) v2	wgowmbB041
Bhi11G000113	Watermelon (97103) v2	wgowmbB051
Bhi11G000113	Watermelon (97103) v1	wgowmB004
Bhi11G000113	Watermelon (97103) v1	wgowmB010
Bhi11G000113	Watermelon (97103) v1	wgowmB046
Bhi11G000113	Silver-seed gourd	carwgoB0670
Bhi11G000113	Silver-seed gourd	carwgoB0829
Bhi11G000113	Silver-seed gourd	carwgoB0909