Bhi10G001284 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi10G001284
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	CC-NBS-LRR disease resistance protein
Location	chr10 : 40566379 .. 40566674 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGGCATTGTAACAGAAATAGGAAAGTATGTGTTTAAACCAATTGGACATCAACTTGGTTACGTTGTTTTCTACAACAGAAACAAGAAAGAGCTTGAAGAGCAACTTGAAAGTCTTGAGACAATGAAAAGGAATGTGGATCAAAGGGTTGAAGAGGCAAGAAGCAAGGCATATACAATCTCTGAGGAAGTCACAAAGTGGTTGAGCGATGTGGATAACGAAAAGGCAAAATATGATGAACTATCCAATTCCAGCCCACATTGCTTCAACATTGTCCAACGACACCATCTAAGTTGA

mRNA sequence

TAGGCATTGTAACAGAAATAGGAAAGTATGTGTTTAAACCAATTGGACATCAACTTGGTTACGTTGTTTTCTACAACAGAAACAAGAAAGAGCTTGAAGAGCAACTTGAAAGTCTTGAGACAATGAAAAGGAATGTGGATCAAAGGGTTGAAGAGGCAAGAAGCAAGGCATATACAATCTCTGAGGAAGTCACAAAGTGGTTGAGCGATGTGGATAACGAAAAGGCAAAATATGATGAACTATCCAATTCCAGCCCACATTGCTTCAACATTGTCCAACGACACCATCTAAGTTGA

Coding sequence (CDS)

TAGGCATTGTAACAGAAATAGGAAAGTATGTGTTTAAACCAATTGGACATCAACTTGGTTACGTTGTTTTCTACAACAGAAACAAGAAAGAGCTTGAAGAGCAACTTGAAAGTCTTGAGACAATGAAAAGGAATGTGGATCAAAGGGTTGAAGAGGCAAGAAGCAAGGCATATACAATCTCTGAGGAAGTCACAAAGTGGTTGAGCGATGTGGATAACGAAAAGGCAAAATATGATGAACTATCCAATTCCAGCCCACATTGCTTCAACATTGTCCAACGACACCATCTAAGTTGA

Protein sequence

GIVTEIGKYVFKPIGHQLGYVVFYNRNKKELEEQLESLETMKRNVDQRVEEARSKAYTISEEVTKWLSDVDNEKAKYDELSNSSPHCFNIVQRHHLS

Homology

[Close]

BLAST of Bhi10G001284 vs. TrEMBL
Match: tr|A0A0A0K5R3|A0A0A0K5R3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G239020 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.8e-26
Identity = 63/96 (65.62%), Postives = 78/96 (81.25%), Query Frame = 0


Query: 2   IVTEIGKYVFKPIGHQLGYVVFYNRNKKELEEQLESLETMKRNVDQRVEEARSKAYTISE 61
           IVT IGKYV KPIG+QLGY+VFYNRNK E++EQLESLET K+++D RVE+A+SKAYTI  
Sbjct: 12  IVTPIGKYVIKPIGNQLGYIVFYNRNKNEIKEQLESLETTKKDLDLRVEDAKSKAYTIFT 71

Query: 62  EVTKWLSDVDNEKAKYDELSNSSPHCFNIVQRHHLS 98
           +V++WL   D+E  K DEL NS+P C N +QRH LS
Sbjct: 72  KVSEWLVAADDEIKKSDELFNSNPPCLNFLQRHQLS 107

[Close]

BLAST of Bhi10G001284 vs. TrEMBL
Match: tr|A0A0A0LTN4|A0A0A0LTN4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G433370 PE=3 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 8.2e-26
Identity = 63/96 (65.62%), Postives = 78/96 (81.25%), Query Frame = 0


Query: 2  IVTEIGKYVFKPIGHQLGYVVFYNRNKKELEEQLESLETMKRNVDQRVEEARSKAYTISE 61
          I+  +     KPIGHQLGY+V YNRNKKEL EQLE+LET K++V+QRVEEA+ K+YTISE
Sbjct: 3  ILVSVIAATIKPIGHQLGYLVCYNRNKKELREQLENLETTKKDVNQRVEEAKGKSYTISE 62

Query: 62 EVTKWLSDVDNEKAKYDELSNSSPHCFNIVQRHHLS 98
          EV+KWL+DVDN    +DELSNS+P CFN+ QR+ LS
Sbjct: 63 EVSKWLADVDN-AITHDELSNSNPSCFNLAQRYQLS 97

[Close]

BLAST of Bhi10G001284 vs. TrEMBL
Match: tr|A0A1S3CHN4|A0A1S3CHN4_CUCME (disease resistance protein At4g27190-like OS=Cucumis melo OX=3656 GN=LOC103501064 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 6.9e-25
Identity = 61/96 (63.54%), Postives = 78/96 (81.25%), Query Frame = 0


Query: 2  IVTEIGKYVFKPIGHQLGYVVFYNRNKKELEEQLESLETMKRNVDQRVEEARSKAYTISE 61
          I+  +     KPIGHQLGY+V YNRNKKEL +QLE+LET KR+V+QRV+EA+ K+YTISE
Sbjct: 3  ILVSVIAATIKPIGHQLGYLVCYNRNKKELRDQLENLETTKRDVNQRVQEAKGKSYTISE 62

Query: 62 EVTKWLSDVDNEKAKYDELSNSSPHCFNIVQRHHLS 98
          EV+KWL+DVDN    +DELSNS+P CFN+ +R+ LS
Sbjct: 63 EVSKWLADVDN-AILHDELSNSNPSCFNLARRYQLS 97

[Close]

BLAST of Bhi10G001284 vs. TrEMBL
Match: tr|A0A2P6QS40|A0A2P6QS40_ROSCH (Putative P-loop containing nucleoside triphosphate hydrolase, leucine-rich repeat domain, L OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0397781 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.2e-07
Identity = 32/104 (30.77%), Postives = 56/104 (53.85%), Query Frame = 0


Query: 1   GIVTEIGKYVFKPIGHQLGYVVFYNRNKKELEEQLESLETMKRNVDQRVEEARSKAYTIS 60
           GIV +I +Y   P+  Q+GY++ YNRN K+L+ QL  L+  + +V++++++   +   + 
Sbjct: 10  GIVGKIAEYTVAPVARQVGYLIHYNRNLKKLQSQLSDLDATRESVERKIDQEERRGRKVE 69

Query: 61  EEVTKWLSDVDNEKAKYDELSNSSPH-------CFNIVQRHHLS 98
             VT WL DV+    +  ++     H       C N+  RH LS
Sbjct: 70  AFVTNWLKDVNKITGEAKDILKDERHVKCLHGFCPNLKLRHQLS 113

[Close]

BLAST of Bhi10G001284 vs. TrEMBL
Match: tr|A0A2P6QUV2|A0A2P6QUV2_ROSCH (Putative P-loop containing nucleoside triphosphate hydrolase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0408401 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.8e-07
Identity = 34/106 (32.08%), Postives = 57/106 (53.77%), Query Frame = 0


Query: 1   GIVTEIGKYVFKPIGHQLGYVVFYNRNKKELEEQLESLETMKRNVDQRVEEARSKAYTIS 60
           GIV +I +Y   P+G Q+GY++FYNRN K L+ QL  L  ++++V+Q++ E +       
Sbjct: 10  GIVAKIAEYTVAPVGRQVGYLIFYNRNLKNLDSQLSDLIAVRQDVEQKIGEEKRNNREAE 69

Query: 61  EEVTKWLSDVDNEKAKYDELSNSSPH---------CFNIVQRHHLS 98
             V+KW+ D  +   + + + N             C N++ RH LS
Sbjct: 70  VHVSKWVIDAKSITKEANNILNEGHKAKVKCLCGLCPNLMLRHKLS 115

[Close]

BLAST of Bhi10G001284 vs. NCBI nr
Match: KGN44289.1 (hypothetical protein Csa_7G239020 [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 4.2e-26
Identity = 63/96 (65.62%), Postives = 78/96 (81.25%), Query Frame = 0


Query: 2   IVTEIGKYVFKPIGHQLGYVVFYNRNKKELEEQLESLETMKRNVDQRVEEARSKAYTISE 61
           IVT IGKYV KPIG+QLGY+VFYNRNK E++EQLESLET K+++D RVE+A+SKAYTI  
Sbjct: 12  IVTPIGKYVIKPIGNQLGYIVFYNRNKNEIKEQLESLETTKKDLDLRVEDAKSKAYTIFT 71

Query: 62  EVTKWLSDVDNEKAKYDELSNSSPHCFNIVQRHHLS 98
           +V++WL   D+E  K DEL NS+P C N +QRH LS
Sbjct: 72  KVSEWLVAADDEIKKSDELFNSNPPCLNFLQRHQLS 107

[Close]

BLAST of Bhi10G001284 vs. NCBI nr
Match: XP_011659043.1 (PREDICTED: probable disease resistance protein At4g27220 [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 4.2e-26
Identity = 63/96 (65.62%), Postives = 78/96 (81.25%), Query Frame = 0


Query: 2   IVTEIGKYVFKPIGHQLGYVVFYNRNKKELEEQLESLETMKRNVDQRVEEARSKAYTISE 61
           IVT IGKYV KPIG+QLGY+VFYNRNK E++EQLESLET K+++D RVE+A+SKAYTI  
Sbjct: 12  IVTPIGKYVIKPIGNQLGYIVFYNRNKNEIKEQLESLETTKKDLDLRVEDAKSKAYTIFT 71

Query: 62  EVTKWLSDVDNEKAKYDELSNSSPHCFNIVQRHHLS 98
           +V++WL   D+E  K DEL NS+P C N +QRH LS
Sbjct: 72  KVSEWLVAADDEIKKSDELFNSNPPCLNFLQRHQLS 107

[Close]

BLAST of Bhi10G001284 vs. NCBI nr
Match: KGN63371.1 (hypothetical protein Csa_2G433370 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 1.2e-25
Identity = 63/96 (65.62%), Postives = 78/96 (81.25%), Query Frame = 0


Query: 2  IVTEIGKYVFKPIGHQLGYVVFYNRNKKELEEQLESLETMKRNVDQRVEEARSKAYTISE 61
          I+  +     KPIGHQLGY+V YNRNKKEL EQLE+LET K++V+QRVEEA+ K+YTISE
Sbjct: 3  ILVSVIAATIKPIGHQLGYLVCYNRNKKELREQLENLETTKKDVNQRVEEAKGKSYTISE 62

Query: 62 EVTKWLSDVDNEKAKYDELSNSSPHCFNIVQRHHLS 98
          EV+KWL+DVDN    +DELSNS+P CFN+ QR+ LS
Sbjct: 63 EVSKWLADVDN-AITHDELSNSNPSCFNLAQRYQLS 97

[Close]

BLAST of Bhi10G001284 vs. NCBI nr
Match: XP_011650062.1 (PREDICTED: probable disease resistance protein At5g63020 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 1.2e-25
Identity = 63/96 (65.62%), Postives = 78/96 (81.25%), Query Frame = 0


Query: 2  IVTEIGKYVFKPIGHQLGYVVFYNRNKKELEEQLESLETMKRNVDQRVEEARSKAYTISE 61
          I+  +     KPIGHQLGY+V YNRNKKEL EQLE+LET K++V+QRVEEA+ K+YTISE
Sbjct: 3  ILVSVIAATIKPIGHQLGYLVCYNRNKKELREQLENLETTKKDVNQRVEEAKGKSYTISE 62

Query: 62 EVTKWLSDVDNEKAKYDELSNSSPHCFNIVQRHHLS 98
          EV+KWL+DVDN    +DELSNS+P CFN+ QR+ LS
Sbjct: 63 EVSKWLADVDN-AITHDELSNSNPSCFNLAQRYQLS 97

[Close]

BLAST of Bhi10G001284 vs. NCBI nr
Match: XP_008462777.1 (PREDICTED: disease resistance protein At4g27190-like [Cucumis melo])

HSP 1 Score: 122.1 bits (305), Expect = 1.0e-24
Identity = 61/96 (63.54%), Postives = 78/96 (81.25%), Query Frame = 0


Query: 2  IVTEIGKYVFKPIGHQLGYVVFYNRNKKELEEQLESLETMKRNVDQRVEEARSKAYTISE 61
          I+  +     KPIGHQLGY+V YNRNKKEL +QLE+LET KR+V+QRV+EA+ K+YTISE
Sbjct: 3  ILVSVIAATIKPIGHQLGYLVCYNRNKKELRDQLENLETTKRDVNQRVQEAKGKSYTISE 62

Query: 62 EVTKWLSDVDNEKAKYDELSNSSPHCFNIVQRHHLS 98
          EV+KWL+DVDN    +DELSNS+P CFN+ +R+ LS
Sbjct: 63 EVSKWLADVDN-AILHDELSNSNPSCFNLARRYQLS 97

The following BLAST results are available for this feature:

BLAST of Bhi10G001284 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi10G001284 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi10G001284 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K5R3\|A0A0A0K5R3_CUCSA	2.8e-26	65.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G239020 PE=3 SV=1	[more]
tr\|A0A0A0LTN4\|A0A0A0LTN4_CUCSA	8.2e-26	65.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G433370 PE=3 SV=1	[more]
tr\|A0A1S3CHN4\|A0A1S3CHN4_CUCME	6.9e-25	63.54	disease resistance protein At4g27190-like OS=Cucumis melo OX=3656 GN=LOC10350106...	[more]
tr\|A0A2P6QS40\|A0A2P6QS40_ROSCH	2.2e-07	30.77	Putative P-loop containing nucleoside triphosphate hydrolase, leucine-rich repea...	[more]
tr\|A0A2P6QUV2\|A0A2P6QUV2_ROSCH	3.8e-07	32.08	Putative P-loop containing nucleoside triphosphate hydrolase OS=Rosa chinensis O...	[more]

BLAST of Bhi10G001284 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44289.1	4.2e-26	65.63	hypothetical protein Csa_7G239020 [Cucumis sativus]	[more]
XP_011659043.1	4.2e-26	65.63	PREDICTED: probable disease resistance protein At4g27220 [Cucumis sativus]	[more]
KGN63371.1	1.2e-25	65.63	hypothetical protein Csa_2G433370 [Cucumis sativus]	[more]
XP_011650062.1	1.2e-25	65.63	PREDICTED: probable disease resistance protein At5g63020 [Cucumis sativus]	[more]
XP_008462777.1	1.0e-24	63.54	PREDICTED: disease resistance protein At4g27190-like [Cucumis melo]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0043531	ADP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M001284	Bhi10M001284	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 21..55
None	No IPR available	PANTHER	PTHR44116	FAMILY NOT NAMED	coord: 2..91

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi10G001284	Cucumber (Gy14) v1	cgywgoB638
Bhi10G001284	Cucumber (Gy14) v2	cgybwgoB168
Bhi10G001284	Cucumber (Gy14) v2	cgybwgoB180
Bhi10G001284	Cucurbita maxima (Rimu)	cmawgoB0696
Bhi10G001284	Cucurbita maxima (Rimu)	cmawgoB0764
Bhi10G001284	Cucurbita moschata (Rifu)	cmowgoB0685
Bhi10G001284	Cucurbita moschata (Rifu)	cmowgoB0690
Bhi10G001284	Cucurbita moschata (Rifu)	cmowgoB0758
Bhi10G001284	Cucurbita pepo (Zucchini)	cpewgoB0358
Bhi10G001284	Cucurbita pepo (Zucchini)	cpewgoB0955
Bhi10G001284	Wild cucumber (PI 183967)	cpiwgoB171
Bhi10G001284	Wild cucumber (PI 183967)	cpiwgoB186
Bhi10G001284	Cucumber (Chinese Long) v3	cucwgoB180
Bhi10G001284	Cucumber (Chinese Long) v3	cucwgoB192
Bhi10G001284	Cucumber (Chinese Long) v2	cuwgoB174
Bhi10G001284	Cucumber (Chinese Long) v2	cuwgoB187
Bhi10G001284	Bottle gourd (USVL1VR-Ls)	lsiwgoB069
Bhi10G001284	Melon (DHL92) v3.6.1	medwgoB128
Bhi10G001284	Melon (DHL92) v3.6.1	medwgoB139
Bhi10G001284	Melon (DHL92) v3.5.1	mewgoB126
Bhi10G001284	Watermelon (Charleston Gray)	wcgwgoB053
Bhi10G001284	Watermelon (97103) v2	wgowmbB389
Bhi10G001284	Watermelon (97103) v1	wgowmB354
Bhi10G001284	Silver-seed gourd	carwgoB1238