Bhi10G000597 (gene) Wax gourd

Overview
NameBhi10G000597
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr10 : 15798980 .. 15799291 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCCTCAAAGATTTGTTTCTGTATTCCTCGCCATAAAAGTGGCCACAAAGCTGATGGAGGATCGGAGAAATCTTCCAAATCTAAGCCTTCTCGCCGCAAATCTCGCCGAGGCACAAAAGGAGGTAAGCATTCCTCTAGTAGTGATAGTAGTGGAAATGGAAACACAGGTGATGCAAATGCTGACAGCACCATGGCTGTGGCTGCCGTTGCTGTCACAGCAGCGGCCACAGCAGTGGCCATGGATGCCTTTGACGATGACGATGGTAGCACCCATGCCCACGGTGGTGAGGGGGGTGGTGGAGATTAG

mRNA sequence

ATGGAGTCCTCAAAGATTTGTTTCTGTATTCCTCGCCATAAAAGTGGCCACAAAGCTGATGGAGGATCGGAGAAATCTTCCAAATCTAAGCCTTCTCGCCGCAAATCTCGCCGAGGCACAAAAGGAGGTAAGCATTCCTCTAGTAGTGATAGTAGTGGAAATGGAAACACAGGTGATGCAAATGCTGACAGCACCATGGCTGTGGCTGCCGTTGCTGTCACAGCAGCGGCCACAGCAGTGGCCATGGATGCCTTTGACGATGACGATGGTAGCACCCATGCCCACGGTGGTGAGGGGGGTGGTGGAGATTAG

Coding sequence (CDS)

ATGGAGTCCTCAAAGATTTGTTTCTGTATTCCTCGCCATAAAAGTGGCCACAAAGCTGATGGAGGATCGGAGAAATCTTCCAAATCTAAGCCTTCTCGCCGCAAATCTCGCCGAGGCACAAAAGGAGGTAAGCATTCCTCTAGTAGTGATAGTAGTGGAAATGGAAACACAGGTGATGCAAATGCTGACAGCACCATGGCTGTGGCTGCCGTTGCTGTCACAGCAGCGGCCACAGCAGTGGCCATGGATGCCTTTGACGATGACGATGGTAGCACCCATGCCCACGGTGGTGAGGGGGGTGGTGGAGATTAG

Protein sequence

MESSKICFCIPRHKSGHKADGGSEKSSKSKPSRRKSRRGTKGGKHSSSSDSSGNGNTGDANADSTMAVAAVAVTAAATAVAMDAFDDDDGSTHAHGGEGGGGD
Homology
[Close]
BLAST of Bhi10G000597 vs. TrEMBL
Match: tr|A0A0A0KFD0|A0A0A0KFD0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188150 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.2e-04
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 0 

Query: 3  SSKICFCIPRHKSGHKADGGSEK 26
          SSKICFCIPRHK+GHKADGGSEK
Sbjct: 4  SSKICFCIPRHKNGHKADGGSEK 26

[Close]
BLAST of Bhi10G000597 vs. NCBI nr
Match: KGN47122.1 (hypothetical protein Csa_6G188150 [Cucumis sativus])

HSP 1 Score: 53.1 bits (126), Expect = 6.3e-04
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 0 

Query: 3  SSKICFCIPRHKSGHKADGGSEK 26
          SSKICFCIPRHK+GHKADGGSEK
Sbjct: 4  SSKICFCIPRHKNGHKADGGSEK 26

The following BLAST results are available for this feature:
BLAST of Bhi10G000597 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi10G000597 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi10G000597 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KFD0|A0A0A0KFD0_CUCSA4.2e-0495.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188150 PE=4 SV=1[more]
BLAST of Bhi10G000597 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47122.16.3e-0495.65hypothetical protein Csa_6G188150 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi10M000597Bhi10M000597mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..29

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi10G000597ClCG02G019870Watermelon (Charleston Gray)wcgwgoB298
Bhi10G000597Cla013330Watermelon (97103) v1wgowmB396
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi10G000597Cucumber (Gy14) v1cgywgoB272
Bhi10G000597Cucumber (Gy14) v2cgybwgoB016
Bhi10G000597Cucumber (Gy14) v2cgybwgoB578
Bhi10G000597Cucurbita maxima (Rimu)cmawgoB0244
Bhi10G000597Cucurbita maxima (Rimu)cmawgoB0692
Bhi10G000597Cucurbita maxima (Rimu)cmawgoB0756
Bhi10G000597Cucurbita maxima (Rimu)cmawgoB1032
Bhi10G000597Cucurbita moschata (Rifu)cmowgoB0238
Bhi10G000597Cucurbita moschata (Rifu)cmowgoB0686
Bhi10G000597Cucurbita moschata (Rifu)cmowgoB0746
Bhi10G000597Cucurbita moschata (Rifu)cmowgoB1026
Bhi10G000597Cucurbita pepo (Zucchini)cpewgoB0353
Bhi10G000597Cucurbita pepo (Zucchini)cpewgoB0542
Bhi10G000597Cucurbita pepo (Zucchini)cpewgoB0543
Bhi10G000597Cucurbita pepo (Zucchini)cpewgoB0628
Bhi10G000597Cucurbita pepo (Zucchini)cpewgoB0807
Bhi10G000597Cucurbita pepo (Zucchini)cpewgoB0943
Bhi10G000597Cucurbita pepo (Zucchini)cpewgoB1126
Bhi10G000597Wild cucumber (PI 183967)cpiwgoB610
Bhi10G000597Cucumber (Chinese Long) v3cucwgoB626
Bhi10G000597Cucumber (Chinese Long) v3cucwgoB705
Bhi10G000597Cucumber (Chinese Long) v2cuwgoB605
Bhi10G000597Bottle gourd (USVL1VR-Ls)lsiwgoB068
Bhi10G000597Melon (DHL92) v3.6.1medwgoB115
Bhi10G000597Melon (DHL92) v3.5.1mewgoB114
Bhi10G000597Watermelon (97103) v2wgowmbB368
Bhi10G000597Silver-seed gourdcarwgoB1058
Bhi10G000597Silver-seed gourdcarwgoB0102
Bhi10G000597Silver-seed gourdcarwgoB0205
Bhi10G000597Silver-seed gourdcarwgoB0419
Bhi10G000597Silver-seed gourdcarwgoB0467
Bhi10G000597Silver-seed gourdcarwgoB0782
Bhi10G000597Silver-seed gourdcarwgoB1169