Bhi10G000125 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi10G000125
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Maintenance of mitochondrial morphology protein like
Location	chr10 : 3407187 .. 3408238 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAATGGGTGTAACTAAAAAAGGAGTGGATATGATAGAAATTCACGGGCAAGACCACCACTCTTGAAACCAGTGAATGCTAAAGTTAAAAGTGTTATAATGCCAGCAATGAAGTGTTTGTGCAATACCATTGCCTTATATCTGCCTACTCACGAGCTCATTTAAAGCTCTTTCTTTCAACCCTTCCTTTTTAAAAACCTCTTACACTCCAATTACAAACGCACAACCTTATTCTTACAATATTCCTCAACCTTATGGCTTCTCTTTTCCCATATTTTCTCATTTATTTCCTCTTCCTTCTTCTATCTTCTCCCACTCTATCCATGGGCGCACGTTGCGTCCCCCCGAGCGCCCCGAGCACCATCGTTAGACCTCTCAGCACACCCGACGTCGAAGATTACGAGACCGTGAAGCCTCAGCTTAACCGAAAGAGGCTGGTTTTCGGTGGCAATGAAGTCAAAAGCTGCCTCCCTAAAGGCTTCCGCCGCTCTTCCGCGCCTAGCCGCTTTGTTAATTATCATACTTCTGGTGGTTGTTCTCCAACCACTGATCATTCCATCAACACCATCCCTTGAAAATAATAAAAACCATGTTTTTTGTTACAATTTTTGTTGTATATGCTTTCTATGATCTCTTCTTCTTCTTCATCTAATTTATTTTTATATATGTTCCCCATATATCATAACTTTTGTTTATTCAATTTTTCTTATTATAATTTGTTCTCCAAAAATTGTGGAACCTTAACTCATGAACCTTGATTATATGTATGATATTATTTGCTCTAAAATTATCTCTTTTCCCCTTTTTTGGGGGGTTAATTAAAGATCTCATTTTTTTTTTTATATGGATTGCTACAATGTCTAGCTTGCTGCAAGCAAAAGCATATAACATATTATTTATTGATATATAAGATCGATCTTCTCGGTAAAAATTGTAATAGTATTGTACGTGTTTAAATTTAAGGGGAAGATTATCTTAATAAATTTTGACTAAATACATGTTATAGTTCCCTACTACTGAAATATATATATTTTTTCAATTTACTCCTTAA

mRNA sequence

AGAAAATGGGTGTAACTAAAAAAGGAGTGGATATGATAGAAATTCACGGGCAAGACCACCACTCTTGAAACCAGTGAATGCTAAAGTTAAAAGTGTTATAATGCCAGCAATGAAGTGTTTGTGCAATACCATTGCCTTATATCTGCCTACTCACGAGCTCATTTAAAGCTCTTTCTTTCAACCCTTCCTTTTTAAAAACCTCTTACACTCCAATTACAAACGCACAACCTTATTCTTACAATATTCCTCAACCTTATGGCTTCTCTTTTCCCATATTTTCTCATTTATTTCCTCTTCCTTCTTCTATCTTCTCCCACTCTATCCATGGGCGCACGTTGCGTCCCCCCGAGCGCCCCGAGCACCATCGTTAGACCTCTCAGCACACCCGACGTCGAAGATTACGAGACCGTGAAGCCTCAGCTTAACCGAAAGAGGCTGGTTTTCGGTGGCAATGAAGTCAAAAGCTGCCTCCCTAAAGGCTTCCGCCGCTCTTCCGCGCCTAGCCGCTTTGTTAATTATCATACTTCTGGTGGTTGTTCTCCAACCACTGATCATTCCATCAACACCATCCCTTGAAAATAATAAAAACCATGTTTTTTGTTACAATTTTTGTTGTATATGCTTTCTATGATCTCTTCTTCTTCTTCATCTAATTTATTTTTATATATGTTCCCCATATATCATAACTTTTGTTTATTCAATTTTTCTTATTATAATTTGTTCTCCAAAAATTGTGGAACCTTAACTCATGAACCTTGATTATATGTATGATATTATTTGCTCTAAAATTATCTCTTTTCCCCTTTTTTGGGGGGTTAATTAAAGATCTCATTTTTTTTTTTATATGGATTGCTACAATGTCTAGCTTGCTGCAAGCAAAAGCATATAACATATTATTTATTGATATATAAGATCGATCTTCTCGGTAAAAATTGTAATAGTATTGTACGTGTTTAAATTTAAGGGGAAGATTATCTTAATAAATTTTGACTAAATACATGTTATAGTTCCCTACTACTGAAATATATATATTTTTTCAATTTACTCCTTAA

Coding sequence (CDS)

ATGGCTTCTCTTTTCCCATATTTTCTCATTTATTTCCTCTTCCTTCTTCTATCTTCTCCCACTCTATCCATGGGCGCACGTTGCGTCCCCCCGAGCGCCCCGAGCACCATCGTTAGACCTCTCAGCACACCCGACGTCGAAGATTACGAGACCGTGAAGCCTCAGCTTAACCGAAAGAGGCTGGTTTTCGGTGGCAATGAAGTCAAAAGCTGCCTCCCTAAAGGCTTCCGCCGCTCTTCCGCGCCTAGCCGCTTTGTTAATTATCATACTTCTGGTGGTTGTTCTCCAACCACTGATCATTCCATCAACACCATCCCTTGA

Protein sequence

MASLFPYFLIYFLFLLLSSPTLSMGARCVPPSAPSTIVRPLSTPDVEDYETVKPQLNRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINTIP

Homology

[Close]

BLAST of Bhi10G000125 vs. TrEMBL
Match: tr|A0A0A0KDD3|A0A0A0KDD3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147570 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.2e-43
Identity = 98/109 (89.91%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 1   MASLFPYFLIYFLF-LLLSSPTLSMGARCVPPSAPSTIVRPLSTPD-VEDYETVKPQL-N 60
           MASLFPYF IY LF LLLSSPT SM ARCVPPSAPSTIVRPL+TPD  E YETVKPQL N
Sbjct: 1   MASLFPYFFIYLLFLLLLSSPTQSMCARCVPPSAPSTIVRPLATPDNAEAYETVKPQLIN 60

Query: 61  RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINTIP 107
           RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINT P
Sbjct: 61  RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINTNP 109

[Close]

BLAST of Bhi10G000125 vs. TrEMBL
Match: tr|I1M4I1|I1M4I1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_13G323700 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.4e-17
Identity = 55/93 (59.14%), Postives = 66/93 (70.97%), Query Frame = 0


Query: 7  YFLIYFLFLLLSSPTL--SMGARCVPPSAPSTIVRPLSTPDVEDYETVKPQLNRKRLVFG 66
          +F +  +FLLLS  +L  +MG R +PPSAPST+ RPL + +VE+Y  VKPQLN K     
Sbjct: 5  HFSLLAIFLLLSLDSLGTTMGGRLIPPSAPSTVTRPLVSSEVENY--VKPQLNHKLKALQ 64

Query: 67 GNEVKSCLPKGFRRSSAPSRFVNYHT--SGGCS 96
          G EVK CLPKG R +SAPSRFVNY T  SGGCS
Sbjct: 65 GREVKGCLPKGSRHNSAPSRFVNYKTLGSGGCS 95

[Close]

BLAST of Bhi10G000125 vs. TrEMBL
Match: tr|K7LVL0|K7LVL0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_12G177000 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 7.6e-17
Identity = 54/93 (58.06%), Postives = 62/93 (66.67%), Query Frame = 0


Query: 5  FPYFLIYFLFLLLSSPTLSMGARCVPPSAPSTIVRPLSTPDVEDYETVKPQLNRKRLVFG 64
          F    IY L  L S    +MG R +PPSAPST+ RPL + +VE+Y  VKPQLN K+    
Sbjct: 6  FSLLAIYLLLSLNSLVGTTMGGRIIPPSAPSTVTRPLVSSEVENY--VKPQLNHKQKALQ 65

Query: 65 GNEVKSCLPKGFRRSSAPSRFVNYHT--SGGCS 96
          G EVK CLPKG R +SAPSRFVNY T  SGGCS
Sbjct: 66 GREVKGCLPKGSRHNSAPSRFVNYKTLGSGGCS 96

[Close]

BLAST of Bhi10G000125 vs. TrEMBL
Match: tr|A0A0B2PGZ4|A0A0B2PGZ4_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_037612 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 7.6e-17
Identity = 54/93 (58.06%), Postives = 62/93 (66.67%), Query Frame = 0


Query: 5  FPYFLIYFLFLLLSSPTLSMGARCVPPSAPSTIVRPLSTPDVEDYETVKPQLNRKRLVFG 64
          F    IY L  L S    +MG R +PPSAPST+ RPL + +VE+Y  VKPQLN K+    
Sbjct: 6  FSLLAIYLLLSLNSLVGTTMGGRIIPPSAPSTVTRPLVSSEVENY--VKPQLNHKQKALQ 65

Query: 65 GNEVKSCLPKGFRRSSAPSRFVNYHT--SGGCS 96
          G EVK CLPKG R +SAPSRFVNY T  SGGCS
Sbjct: 66 GREVKGCLPKGSRHNSAPSRFVNYKTLGSGGCS 96

[Close]

BLAST of Bhi10G000125 vs. TrEMBL
Match: tr|A0A2P5FTP0|A0A2P5FTP0_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_029170 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.9e-16
Identity = 53/96 (55.21%), Postives = 65/96 (67.71%), Query Frame = 0


Query: 3   SLFPYFLIY-FLFLLLSSPTLSMGARCVPPSAPSTIVRPLSTPDVEDYETVKPQLN-RKR 62
           SL+   L+Y  + LLLSS  +SM  R +P SAPST+VRPL T   +DY +++P LN  + 
Sbjct: 6   SLYVMILLYSIISLLLSSFDVSMAGRAIPSSAPSTVVRPLVTDADQDYVSLRPHLNPGQN 65

Query: 63  LVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSP 97
            VF G E K CLPKGFR +SAPSRFVNYH  G  SP
Sbjct: 66  QVFRGREFKGCLPKGFRHASAPSRFVNYHPLGALSP 101

[Close]

BLAST of Bhi10G000125 vs. NCBI nr
Match: KGN46864.1 (hypothetical protein Csa_6G147570 [Cucumis sativus])

HSP 1 Score: 182.2 bits (461), Expect = 9.3e-43
Identity = 98/109 (89.91%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 1   MASLFPYFLIYFLF-LLLSSPTLSMGARCVPPSAPSTIVRPLSTPD-VEDYETVKPQL-N 60
           MASLFPYF IY LF LLLSSPT SM ARCVPPSAPSTIVRPL+TPD  E YETVKPQL N
Sbjct: 1   MASLFPYFFIYLLFLLLLSSPTQSMCARCVPPSAPSTIVRPLATPDNAEAYETVKPQLIN 60

Query: 61  RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINTIP 107
           RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINT P
Sbjct: 61  RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINTNP 109

[Close]

BLAST of Bhi10G000125 vs. NCBI nr
Match: KRH22854.1 (hypothetical protein GLYMA_13G323700 [Glycine max])

HSP 1 Score: 96.3 bits (238), Expect = 6.7e-17
Identity = 55/93 (59.14%), Postives = 66/93 (70.97%), Query Frame = 0


Query: 7  YFLIYFLFLLLSSPTL--SMGARCVPPSAPSTIVRPLSTPDVEDYETVKPQLNRKRLVFG 66
          +F +  +FLLLS  +L  +MG R +PPSAPST+ RPL + +VE+Y  VKPQLN K     
Sbjct: 5  HFSLLAIFLLLSLDSLGTTMGGRLIPPSAPSTVTRPLVSSEVENY--VKPQLNHKLKALQ 64

Query: 67 GNEVKSCLPKGFRRSSAPSRFVNYHT--SGGCS 96
          G EVK CLPKG R +SAPSRFVNY T  SGGCS
Sbjct: 65 GREVKGCLPKGSRHNSAPSRFVNYKTLGSGGCS 95

[Close]

BLAST of Bhi10G000125 vs. NCBI nr
Match: KHN06868.1 (hypothetical protein glysoja_037612 [Glycine soja] >KRH26510.1 hypothetical protein GLYMA_12G177000 [Glycine max])

HSP 1 Score: 95.5 bits (236), Expect = 1.1e-16
Identity = 54/93 (58.06%), Postives = 62/93 (66.67%), Query Frame = 0


Query: 5  FPYFLIYFLFLLLSSPTLSMGARCVPPSAPSTIVRPLSTPDVEDYETVKPQLNRKRLVFG 64
          F    IY L  L S    +MG R +PPSAPST+ RPL + +VE+Y  VKPQLN K+    
Sbjct: 6  FSLLAIYLLLSLNSLVGTTMGGRIIPPSAPSTVTRPLVSSEVENY--VKPQLNHKQKALQ 65

Query: 65 GNEVKSCLPKGFRRSSAPSRFVNYHT--SGGCS 96
          G EVK CLPKG R +SAPSRFVNY T  SGGCS
Sbjct: 66 GREVKGCLPKGSRHNSAPSRFVNYKTLGSGGCS 96

[Close]

BLAST of Bhi10G000125 vs. NCBI nr
Match: PQQ20695.1 (hypothetical protein Pyn_14613 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 94.7 bits (234), Expect = 2.0e-16
Identity = 55/96 (57.29%), Postives = 69/96 (71.88%), Query Frame = 0


Query: 2  ASLFPYFLIYFLFLLLSSPTLSMGARCVPPSAPSTIVRPLSTPDVEDYETVKPQ-LNRKR 61
          +S+F   LIY L L  +   +S+ AR +P SAPST+VRPL T  ++ Y ++KPQ LN K+
Sbjct: 3  SSIFCVALIYSL-LFFTCFDVSLAARNIPSSAPSTMVRPLVTEGLDHYASMKPQDLNHKQ 62

Query: 62 LVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSG-GCS 96
           VF G EVK CLPKGFR +SAPSR+VNYHT G GCS
Sbjct: 63 QVFHGTEVKDCLPKGFRHASAPSRYVNYHTLGQGCS 97

[Close]

BLAST of Bhi10G000125 vs. NCBI nr
Match: XP_017424785.1 (PREDICTED: uncharacterized protein LOC108333834 [Vigna angularis] >KOM44161.1 hypothetical protein LR48_Vigan05g176600 [Vigna angularis] >BAT91997.1 hypothetical protein VIGAN_07065200 [Vigna angularis var. angularis])

HSP 1 Score: 93.6 bits (231), Expect = 4.4e-16
Identity = 53/93 (56.99%), Postives = 62/93 (66.67%), Query Frame = 0


Query: 5  FPYFLIYFLFLLLSSPTLSMGARCVPPSAPSTIVRPLSTPDVEDYETVKPQLNRKRLVFG 64
          F    I +L L LSS   +M  R +PPSAPST+ RPL + +VE+Y  VKPQLN K+    
Sbjct: 6  FSLLAIIYLLLSLSSLGTTMAGRIIPPSAPSTVTRPLVSSEVENY--VKPQLNHKQKALQ 65

Query: 65 GNEVKSCLPKGFRRSSAPSRFVNYHTSG--GCS 96
          G EVK CLPKG R +SAPSRFVNY T G  GCS
Sbjct: 66 GREVKGCLPKGSRHNSAPSRFVNYKTLGSTGCS 96

The following BLAST results are available for this feature:

BLAST of Bhi10G000125 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi10G000125 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi10G000125 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KDD3\|A0A0A0KDD3_CUCSA	6.2e-43	89.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147570 PE=4 SV=1	[more]
tr\|I1M4I1\|I1M4I1_SOYBN	4.4e-17	59.14	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_13G323700 PE=4 SV=1	[more]
tr\|K7LVL0\|K7LVL0_SOYBN	7.6e-17	58.06	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_12G177000 PE=4 SV=1	[more]
tr\|A0A0B2PGZ4\|A0A0B2PGZ4_GLYSO	7.6e-17	58.06	Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_037612 PE=4 SV=1	[more]
tr\|A0A2P5FTP0\|A0A2P5FTP0_9ROSA	2.9e-16	55.21	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_029170 PE=4 S...	[more]

BLAST of Bhi10G000125 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN46864.1	9.3e-43	89.91	hypothetical protein Csa_6G147570 [Cucumis sativus]	[more]
KRH22854.1	6.7e-17	59.14	hypothetical protein GLYMA_13G323700 [Glycine max]	[more]
KHN06868.1	1.1e-16	58.06	hypothetical protein glysoja_037612 [Glycine soja] >KRH26510.1 hypothetical prot...	[more]
PQQ20695.1	2.0e-16	57.29	hypothetical protein Pyn_14613 [Prunus yedoensis var. nudiflora]	[more]
XP_017424785.1	4.4e-16	56.99	PREDICTED: uncharacterized protein LOC108333834 [Vigna angularis] >KOM44161.1 hy...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M000125	Bhi10M000125	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36619:SF1	SUBFAMILY NOT NAMED	coord: 7..96
None	No IPR available	PANTHER	PTHR36619	FAMILY NOT NAMED	coord: 7..96

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi10G000125	Csa6G147570	Cucumber (Chinese Long) v2	cuwgoB606
Bhi10G000125	MELO3C026916	Melon (DHL92) v3.5.1	mewgoB001
Bhi10G000125	ClCG02G021400	Watermelon (Charleston Gray)	wcgwgoB300
Bhi10G000125	CSPI06G11750	Wild cucumber (PI 183967)	cpiwgoB611
Bhi10G000125	CmoCh20G005400	Cucurbita moschata (Rifu)	cmowgoB0691
Bhi10G000125	Lsi10G012420	Bottle gourd (USVL1VR-Ls)	lsiwgoB070
Bhi10G000125	MELO3C026916.2	Melon (DHL92) v3.6.1	medwgoB130
Bhi10G000125	CsaV3_6G014180	Cucumber (Chinese Long) v3	cucwgoB627
Bhi10G000125	Cla008716	Watermelon (97103) v1	wgowmB397
Bhi10G000125	Cla97C02G047490	Watermelon (97103) v2	wgowmbB369

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi10G000125	Cucumber (Gy14) v1	cgywgoB769
Bhi10G000125	Cucumber (Gy14) v2	cgybwgoB579
Bhi10G000125	Cucurbita maxima (Rimu)	cmawgoB0697
Bhi10G000125	Cucurbita maxima (Rimu)	cmawgoB0747
Bhi10G000125	Cucurbita moschata (Rifu)	cmowgoB0738
Bhi10G000125	Cucurbita pepo (Zucchini)	cpewgoB0357
Bhi10G000125	Cucurbita pepo (Zucchini)	cpewgoB0961
Bhi10G000125	Silver-seed gourd	carwgoB0421
Bhi10G000125	Silver-seed gourd	carwgoB1068