Bhi09G001791 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi09G001791
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	F10A5.9
Location	chr9 : 59562771 .. 59563091 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGGCCTAAAACTACTGAAGCCCTCATCACTGCTTCTTCTTCTTCCAACTCTCTAAACTTCTCTTCCATGAAGCTCTTTCATCGAATCCGTAAGATACTCGTACGCTTTGTCTTTTCGATCCCATCTCGAGTGTCGTCATCGTCGAGACAAAGAACAAGCTACAACAAGTCGTTTGATCCACCAAAAACATCATGTAGCTCCTATTACTCTTCCCACTCCCACTACGACGAGGCCATTGCTGATTGTATCGAGTTCTTCAACAAGTCGTCGCAAGATGGAGTTTTTGAAGCTCAAAAACCAATCACCTTGGTATGA

mRNA sequence

ATGCAAAGGCCTAAAACTACTGAAGCCCTCATCACTGCTTCTTCTTCTTCCAACTCTCTAAACTTCTCTTCCATGAAGCTCTTTCATCGAATCCGTAAGATACTCGTACGCTTTGTCTTTTCGATCCCATCTCGAGTGTCGTCATCGTCGAGACAAAGAACAAGCTACAACAAGTCGTTTGATCCACCAAAAACATCATGTAGCTCCTATTACTCTTCCCACTCCCACTACGACGAGGCCATTGCTGATTGTATCGAGTTCTTCAACAAGTCGTCGCAAGATGGAGTTTTTGAAGCTCAAAAACCAATCACCTTGGTATGA

Coding sequence (CDS)

ATGCAAAGGCCTAAAACTACTGAAGCCCTCATCACTGCTTCTTCTTCTTCCAACTCTCTAAACTTCTCTTCCATGAAGCTCTTTCATCGAATCCGTAAGATACTCGTACGCTTTGTCTTTTCGATCCCATCTCGAGTGTCGTCATCGTCGAGACAAAGAACAAGCTACAACAAGTCGTTTGATCCACCAAAAACATCATGTAGCTCCTATTACTCTTCCCACTCCCACTACGACGAGGCCATTGCTGATTGTATCGAGTTCTTCAACAAGTCGTCGCAAGATGGAGTTTTTGAAGCTCAAAAACCAATCACCTTGGTATGA

Protein sequence

MQRPKTTEALITASSSSNSLNFSSMKLFHRIRKILVRFVFSIPSRVSSSSRQRTSYNKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDGVFEAQKPITLV

Homology

[Close]

BLAST of Bhi09G001791 vs. TAIR10
Match: AT1G75717.1 (unknown protein)

HSP 1 Score: 74.3 bits (181), Expect = 5.0e-14
Identity = 42/72 (58.33%), Postives = 49/72 (68.06%), Query Frame = 0


Query: 25 MKLFHRIRKILVR---FVFSIPSRVSSSSRQRTSYNKSFDPPKTSC-SSYYSSHSHYDEA 84
          MKLFH++ KIL+R   F     SR    +  R+   + F+PPK SC SSYYSSH HY EA
Sbjct: 1  MKLFHKLGKILMRLIDFTLHSSSRRQKKNNSRSGDGERFEPPKISCSSSYYSSHVHYSEA 60

Query: 85 IADCIEFFNKSS 93
          IADCIEFFNKSS
Sbjct: 61 IADCIEFFNKSS 72

[Close]

BLAST of Bhi09G001791 vs. TrEMBL
Match: tr|A0A0A0LDK4|A0A0A0LDK4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872120 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.0e-37
Identity = 89/108 (82.41%), Postives = 93/108 (86.11%), Query Frame = 0


Query: 1   MQRPKTTEALITA----SSSSNSLNFSSMKLFHRIRKILVRFVFSIPSRVSSSSRQRTSY 60
           MQRPKT+ ALITA          LNFSSMKLF RIRK+LVRFVFSIPSRVSSSSR+RTSY
Sbjct: 1   MQRPKTSAALITAXXXXXXXXXXLNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSY 60

Query: 61  NKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDGVFEAQKPIT 105
           +KSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD  FE QKPIT
Sbjct: 61  DKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDRGFEDQKPIT 108

[Close]

BLAST of Bhi09G001791 vs. TrEMBL
Match: tr|A0A061FD82|A0A061FD82_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_034216 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.0e-22
Identity = 61/98 (62.24%), Postives = 77/98 (78.57%), Query Frame = 0


Query: 13  ASSSSNSLNFSSMKLFHRIRKILVRFVFSIP----SRVSSSSRQRTSYNKSFDPPKTSCS 72
           AS+ S  LNFS+MKLF+R RKIL+R +FS+P    S  SS + ++T+ ++ FDPPKTSCS
Sbjct: 56  ASTLSPKLNFSAMKLFNRFRKILMRLIFSLPSGGSSGTSSMAPKQTNCDR-FDPPKTSCS 115

Query: 73  SYYSSHSHYDEAIADCIEFFNKSSQDGVFEAQKPITLV 107
           SYYSSHSHY EAIADCIEFFNKSSQ+G+ + +K   LV
Sbjct: 116 SYYSSHSHYTEAIADCIEFFNKSSQEGIMDGRKSDVLV 152

[Close]

BLAST of Bhi09G001791 vs. TrEMBL
Match: tr|A0A1J7GSL2|A0A1J7GSL2_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_30955 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 7.8e-22
Identity = 59/89 (66.29%), Postives = 74/89 (83.15%), Query Frame = 0


Query: 16  SSNSLNFSSMKLFHRIRKILVRFVFSIPSRVSSS---SRQRTSYNKSFDPPKTSCSSYYS 75
           SS   NFS+MKLFHR RK+L+R +F+IPS  SSS   SRQR S+++ F+PPKTSCSSYYS
Sbjct: 47  SSIKFNFSAMKLFHRFRKVLMRLMFTIPSPKSSSSDHSRQRNSHDR-FEPPKTSCSSYYS 106

Query: 76  SHSHYDEAIADCIEFFNKSSQDGVFEAQK 102
           S+SHY+EAI+DCIEFFNKS+QDG  + +K
Sbjct: 107 SYSHYNEAISDCIEFFNKSAQDGFSDGRK 134

[Close]

BLAST of Bhi09G001791 vs. TrEMBL
Match: tr|A0A2K2ALM6|A0A2K2ALM6_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G238400v3 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 7.8e-22
Identity = 58/95 (61.05%), Postives = 75/95 (78.95%), Query Frame = 0


Query: 7   TEALITASSSSNSLNFSSMKLFHRIRKILVRFVFSIPSRVSSSSRQRTSYNKSFDPPKTS 66
           +EAL   +  ++  NFS+MKLF+R RKIL+R VFS P+  S +S+QR+   + FDPPKTS
Sbjct: 20  SEALSDQAPQASKFNFSAMKLFNRFRKILMRLVFSSPTTSSMASKQRSC--ERFDPPKTS 79

Query: 67  CSSYYSSHSHYDEAIADCIEFFNKSSQDGVFEAQK 102
           CSSYYSS+SHY EAIADCIEFFNKSSQ+G+ + +K
Sbjct: 80  CSSYYSSNSHYSEAIADCIEFFNKSSQEGILDGRK 112

[Close]

BLAST of Bhi09G001791 vs. TrEMBL
Match: tr|A0A0L9VAG4|A0A0L9VAG4_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g031300 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.3e-21
Identity = 55/81 (67.90%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 21  NFSSMKLFHRIRKILVRFVFSIPSRVSSSSRQRTSYNKSFDPPKTSCSSYYSSHSHYDEA 80
           N S+MKLF R RKI +RFVFS+PSR S  S+ + S    F+PPKTSCSSYYSS+SHY+EA
Sbjct: 39  NLSAMKLFQRFRKIFMRFVFSVPSRRSKDSKHKVS--DRFEPPKTSCSSYYSSYSHYNEA 98

Query: 81  IADCIEFFNKSSQDGVFEAQK 102
           IADCIEFFNKS+QDG+F+ +K
Sbjct: 99  IADCIEFFNKSAQDGIFDGRK 117

[Close]

BLAST of Bhi09G001791 vs. NCBI nr
Match: KGN60030.1 (hypothetical protein Csa_3G872120 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 4.5e-37
Identity = 89/108 (82.41%), Postives = 93/108 (86.11%), Query Frame = 0


Query: 1   MQRPKTTEALITA----SSSSNSLNFSSMKLFHRIRKILVRFVFSIPSRVSSSSRQRTSY 60
           MQRPKT+ ALITA          LNFSSMKLF RIRK+LVRFVFSIPSRVSSSSR+RTSY
Sbjct: 1   MQRPKTSAALITAXXXXXXXXXXLNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSY 60

Query: 61  NKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDGVFEAQKPIT 105
           +KSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD  FE QKPIT
Sbjct: 61  DKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDRGFEDQKPIT 108

[Close]

BLAST of Bhi09G001791 vs. NCBI nr
Match: RDX72233.1 (hypothetical protein CR513_48306, partial [Mucuna pruriens])

HSP 1 Score: 114.4 bits (285), Expect = 2.4e-22
Identity = 59/82 (71.95%), Postives = 69/82 (84.15%), Query Frame = 0


Query: 20  LNFSSMKLFHRIRKILVRFVFSIPSRVSSSSRQRTSYNKSFDPPKTSCSSYYSSHSHYDE 79
           LN S+MKLF R RKIL+R VFS+PSR SS SR + S    F+PPKTSCSSYYSS+SHY+E
Sbjct: 35  LNLSAMKLFQRFRKILMRLVFSVPSRRSSDSRHKVS--DRFEPPKTSCSSYYSSYSHYNE 94

Query: 80  AIADCIEFFNKSSQDGVFEAQK 102
           AIADCIEFFNKS+QDGV +A+K
Sbjct: 95  AIADCIEFFNKSAQDGVLDARK 114

[Close]

BLAST of Bhi09G001791 vs. NCBI nr
Match: XP_021284958.1 (uncharacterized protein LOC110417084 [Herrania umbratica])

HSP 1 Score: 112.8 bits (281), Expect = 6.9e-22
Identity = 61/98 (62.24%), Postives = 77/98 (78.57%), Query Frame = 0


Query: 13  ASSSSNSLNFSSMKLFHRIRKILVRFVFSIP----SRVSSSSRQRTSYNKSFDPPKTSCS 72
           AS+ S  LNFS+MKLF+R RKIL+R +FS+P    S  SS + ++T+ ++ FDPPKTSCS
Sbjct: 29  ASTLSPKLNFSAMKLFNRFRKILMRLIFSLPSGGSSGTSSMAAKQTNCDR-FDPPKTSCS 88

Query: 73  SYYSSHSHYDEAIADCIEFFNKSSQDGVFEAQKPITLV 107
           SYYSSHSHY EAIADCIEFFNKSSQ+G+ + +K   LV
Sbjct: 89  SYYSSHSHYTEAIADCIEFFNKSSQEGIMDGRKSDVLV 125

[Close]

BLAST of Bhi09G001791 vs. NCBI nr
Match: EOY15016.1 (Uncharacterized protein TCM_034216 [Theobroma cacao])

HSP 1 Score: 112.5 bits (280), Expect = 9.1e-22
Identity = 61/98 (62.24%), Postives = 77/98 (78.57%), Query Frame = 0


Query: 13  ASSSSNSLNFSSMKLFHRIRKILVRFVFSIP----SRVSSSSRQRTSYNKSFDPPKTSCS 72
           AS+ S  LNFS+MKLF+R RKIL+R +FS+P    S  SS + ++T+ ++ FDPPKTSCS
Sbjct: 56  ASTLSPKLNFSAMKLFNRFRKILMRLIFSLPSGGSSGTSSMAPKQTNCDR-FDPPKTSCS 115

Query: 73  SYYSSHSHYDEAIADCIEFFNKSSQDGVFEAQKPITLV 107
           SYYSSHSHY EAIADCIEFFNKSSQ+G+ + +K   LV
Sbjct: 116 SYYSSHSHYTEAIADCIEFFNKSSQEGIMDGRKSDVLV 152

[Close]

BLAST of Bhi09G001791 vs. NCBI nr
Match: XP_007017791.2 (PREDICTED: uncharacterized protein LOC18591544 [Theobroma cacao])

HSP 1 Score: 112.5 bits (280), Expect = 9.1e-22
Identity = 61/98 (62.24%), Postives = 77/98 (78.57%), Query Frame = 0


Query: 13  ASSSSNSLNFSSMKLFHRIRKILVRFVFSIP----SRVSSSSRQRTSYNKSFDPPKTSCS 72
           AS+ S  LNFS+MKLF+R RKIL+R +FS+P    S  SS + ++T+ ++ FDPPKTSCS
Sbjct: 29  ASTLSPKLNFSAMKLFNRFRKILMRLIFSLPSGGSSGTSSMAPKQTNCDR-FDPPKTSCS 88

Query: 73  SYYSSHSHYDEAIADCIEFFNKSSQDGVFEAQKPITLV 107
           SYYSSHSHY EAIADCIEFFNKSSQ+G+ + +K   LV
Sbjct: 89  SYYSSHSHYTEAIADCIEFFNKSSQEGIMDGRKSDVLV 125

The following BLAST results are available for this feature:

BLAST of Bhi09G001791 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi09G001791 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G75717.1	5.0e-14	58.33	unknown protein	[more]

BLAST of Bhi09G001791 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LDK4\|A0A0A0LDK4_CUCSA	3.0e-37	82.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872120 PE=4 SV=1	[more]
tr\|A0A061FD82\|A0A061FD82_THECC	6.0e-22	62.24	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_034216 PE=4 SV=1	[more]
tr\|A0A1J7GSL2\|A0A1J7GSL2_LUPAN	7.8e-22	66.29	Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_30955 PE=4 S...	[more]
tr\|A0A2K2ALM6\|A0A2K2ALM6_POPTR	7.8e-22	61.05	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G238400v3 PE=...	[more]
tr\|A0A0L9VAG4\|A0A0L9VAG4_PHAAN	1.3e-21	67.90	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g031300 PE...	[more]

BLAST of Bhi09G001791 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60030.1	4.5e-37	82.41	hypothetical protein Csa_3G872120 [Cucumis sativus]	[more]
RDX72233.1	2.4e-22	71.95	hypothetical protein CR513_48306, partial [Mucuna pruriens]	[more]
XP_021284958.1	6.9e-22	62.24	uncharacterized protein LOC110417084 [Herrania umbratica]	[more]
EOY15016.1	9.1e-22	62.24	Uncharacterized protein TCM_034216 [Theobroma cacao]	[more]
XP_007017791.2	9.1e-22	62.24	PREDICTED: uncharacterized protein LOC18591544 [Theobroma cacao]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M001791	Bhi09M001791	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..64
None	No IPR available	PANTHER	PTHR35111:SF2	F10A5.9	coord: 25..101
None	No IPR available	PANTHER	PTHR35111	FAMILY NOT NAMED	coord: 25..101

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi09G001791	Csa3G872120	Cucumber (Chinese Long) v2	cuwgoB348
Bhi09G001791	ClCG05G018320	Watermelon (Charleston Gray)	wcgwgoB474
Bhi09G001791	CSPI03G43360	Wild cucumber (PI 183967)	cpiwgoB350
Bhi09G001791	CmaCh09G001070	Cucurbita maxima (Rimu)	cmawgoB0030
Bhi09G001791	CmoCh09G001030	Cucurbita moschata (Rifu)	cmowgoB0024
Bhi09G001791	Lsi04G017400	Bottle gourd (USVL1VR-Ls)	lsiwgoB404
Bhi09G001791	Cp4.1LG06g00690	Cucurbita pepo (Zucchini)	cpewgoB0993
Bhi09G001791	Cp4.1LG02g07930	Cucurbita pepo (Zucchini)	cpewgoB0716
Bhi09G001791	Carg08681	Silver-seed gourd	carwgoB0120
Bhi09G001791	CsaV3_3G045820	Cucumber (Chinese Long) v3	cucwgoB352

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None