Bhi09G001594 (gene) Wax gourd

NameBhi09G001594
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr9 : 52178402 .. 52178647 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCCAAGCGGGGGTGAAATGAGCTCTAAGGATTACCATACTCCAAGTGTTACCACAAGGTTGAAGGACATCGAGACTGTGCCTCAGTCCTCCATAAAAAGAAGAGGTTATAGGAGATCCGAGGCGAAGAGTGGGAATTCGGGAAGTGGAACAAAAACTTTGATCTTTTGTTCAAATCGGTTTTTGAATCTGATTTCCCCACCAGAGAAGCTGGAAGCTTGGAAAGGAGGTCACGATCAATAG

mRNA sequence

ATGCCTCCAAGCGGGGGTGAAATGAGCTCTAAGGATTACCATACTCCAAGTGTTACCACAAGGTTGAAGGACATCGAGACTGTGCCTCAGTCCTCCATAAAAAGAAGAGGTTATAGGAGATCCGAGGCGAAGAGTGGGAATTCGGGAAGTGGAACAAAAACTTTGATCTTTTGTTCAAATCGGTTTTTGAATCTGATTTCCCCACCAGAGAAGCTGGAAGCTTGGAAAGGAGGTCACGATCAATAG

Coding sequence (CDS)

ATGCCTCCAAGCGGGGGTGAAATGAGCTCTAAGGATTACCATACTCCAAGTGTTACCACAAGGTTGAAGGACATCGAGACTGTGCCTCAGTCCTCCATAAAAAGAAGAGGTTATAGGAGATCCGAGGCGAAGAGTGGGAATTCGGGAAGTGGAACAAAAACTTTGATCTTTTGTTCAAATCGGTTTTTGAATCTGATTTCCCCACCAGAGAAGCTGGAAGCTTGGAAAGGAGGTCACGATCAATAG

Protein sequence

MPPSGGEMSSKDYHTPSVTTRLKDIETVPQSSIKRRGYRRSEAKSGNSGSGTKTLIFCSNRFLNLISPPEKLEAWKGGHDQ
BLAST of Bhi09G001594 vs. TrEMBL
Match: tr|A0A1S3C006|A0A1S3C006_CUCME (uncharacterized protein LOC103494912 OS=Cucumis melo OX=3656 GN=LOC103494912 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.6e-04
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 0

Query: 1   MPPSGGEMSSKDYHTPSVTTRLKDIETVPQSSIK 35
           MPP GGE+SSKDYHTP+VT R KD + V +SSIK
Sbjct: 464 MPPGGGEISSKDYHTPNVTARSKDSKIVSRSSIK 497

BLAST of Bhi09G001594 vs. NCBI nr
Match: XP_008454514.1 (PREDICTED: uncharacterized protein LOC103494912 [Cucumis melo])

HSP 1 Score: 52.4 bits (124), Expect = 8.5e-04
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 0

Query: 1   MPPSGGEMSSKDYHTPSVTTRLKDIETVPQSSIK 35
           MPP GGE+SSKDYHTP+VT R KD + V +SSIK
Sbjct: 464 MPPGGGEISSKDYHTPNVTARSKDSKIVSRSSIK 497

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3C006|A0A1S3C006_CUCME5.6e-0470.59uncharacterized protein LOC103494912 OS=Cucumis melo OX=3656 GN=LOC103494912 PE=... [more]
Match NameE-valueIdentityDescription
XP_008454514.18.5e-0470.59PREDICTED: uncharacterized protein LOC103494912 [Cucumis melo][more]

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M001594Bhi09M001594mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..42