Bhi08G000536 (gene) Wax gourd

NameBhi08G000536
Typegene
OrganismBenincasa hispida (Wax gourd)
Descriptioncyclin-dependent protein kinase inhibitor SMR3-like
Locationchr8 : 20358170 .. 20359157 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCGTATTCAATCGAAACTCAGGTAAAATAAGGAAATACATGTGGAAGTGTATATTTGTTGCATTGGATCCTTCGCCGAAGTGCATAATTTAAAAGGTCTATTTTTTTCTTTATTTTATTTTATTTATGTTGTCTTTTTTTCTCTCTCTCTCTACTTGGAAACACCTTGAGAGCTAAAATCCAAAGCATTGAAAATCACAAGACAAAGAGGAAAGACATGTAGTGGCTTTGATAATTATATATCCTTTCTTTCAAATCTTATATTTTTTCCTATTATATATCATCATTCAATTTTTTCCTCAACACCTCCCCTCTCTCTAAATTTCTCTTTTTTTTTCCTTTTTTTTTTTTATGAAAATTTTCCATGCACGTATAATTATTTGAATTGAAAAATGGGTCTCTTCAATTCAAGTATTTTACTCTCTGAAAATGATGTAAACTCCATGGAATTCACTTTTCTTTTGAGATATGTCAATTCCAAGGAAGAAGAAGAAGAGAAAAATGGAAGCAACTTAGTTGTTGAAGATGATGACAATGGGTTCAAAACTCCAACATCTTTGGAGCATAAAATTCCAACAAGTCTCCGGTGTCCAAAGGCGCCGAGGAAACCGAAACCTCGGCCGTTGACGAAGCGGAAGGCGGCGGAACGACACCGTTTGTTGCTGGATCTTTCCACTGAGATTCAGTCTTTGTTTCCAGCTGATTTTCTTGTAGGCCTTGGCGGTAAGATCAAGAGGGTTAGACAATAAAGAAACAAAAACTTTGATTCATAACCAAAAAAAATTGTACTGCTATGGTTTCTTTTTTCTTTTTTCTCTCTTGGGCTTTAGTTGTCAAAATTGATATTGTAGAAATATTGGGTTTCTCTGTTTAGATATGATCTCTCCTCCGGCAGTCTTCTCCGGCAGCGGCGAGGTGCAACTTGTTAGCTTAAAATCTGAATCTTAACATAAATATCATAACAAAATTTATGAATGTCTATTTTCCT

mRNA sequence

CTCGTATTCAATCGAAACTCAGGTAAAATAAGGAAATACATGTGGAAGTGTATATTTGTTGCATTGGATCCTTCGCCGAAGTGCATAATTTAAAAGGTCTATTTTTTTCTTTATTTTATTTTATTTATGTTGTCTTTTTTTCTCTCTCTCTCTACTTGGAAACACCTTGAGAGCTAAAATCCAAAGCATTGAAAATCACAAGACAAAGAGGAAAGACATGTAGTGGCTTTGATAATTATATATCCTTTCTTTCAAATCTTATATTTTTTCCTATTATATATCATCATTCAATTTTTTCCTCAACACCTCCCCTCTCTCTAAATTTCTCTTTTTTTTTCCTTTTTTTTTTTTATGAAAATTTTCCATGCACGTATAATTATTTGAATTGAAAAATGGGTCTCTTCAATTCAAGTATTTTACTCTCTGAAAATGATGTAAACTCCATGGAATTCACTTTTCTTTTGAGATATGTCAATTCCAAGGAAGAAGAAGAAGAGAAAAATGGAAGCAACTTAGTTGTTGAAGATGATGACAATGGGTTCAAAACTCCAACATCTTTGGAGCATAAAATTCCAACAAGTCTCCGGTGTCCAAAGGCGCCGAGGAAACCGAAACCTCGGCCGTTGACGAAGCGGAAGGCGGCGGAACGACACCGTTTGTTGCTGGATCTTTCCACTGAGATTCAGTCTTTGTTTCCAGCTGATTTTCTTGTAGGCCTTGGCGGTAAGATCAAGAGGGTTAGACAATAAAGAAACAAAAACTTTGATTCATAACCAAAAAAAATTGTACTGCTATGGTTTCTTTTTTCTTTTTTCTCTCTTGGGCTTTAGTTGTCAAAATTGATATTGTAGAAATATTGGGTTTCTCTGTTTAGATATGATCTCTCCTCCGGCAGTCTTCTCCGGCAGCGGCGAGGTGCAACTTGTTAGCTTAAAATCTGAATCTTAACATAAATATCATAACAAAATTTATGAATGTCTATTTTCCT

Coding sequence (CDS)

ATGGGTCTCTTCAATTCAAGTATTTTACTCTCTGAAAATGATGTAAACTCCATGGAATTCACTTTTCTTTTGAGATATGTCAATTCCAAGGAAGAAGAAGAAGAGAAAAATGGAAGCAACTTAGTTGTTGAAGATGATGACAATGGGTTCAAAACTCCAACATCTTTGGAGCATAAAATTCCAACAAGTCTCCGGTGTCCAAAGGCGCCGAGGAAACCGAAACCTCGGCCGTTGACGAAGCGGAAGGCGGCGGAACGACACCGTTTGTTGCTGGATCTTTCCACTGAGATTCAGTCTTTGTTTCCAGCTGATTTTCTTGTAGGCCTTGGCGGTAAGATCAAGAGGGTTAGACAATAA

Protein sequence

MGLFNSSILLSENDVNSMEFTFLLRYVNSKEEEEEKNGSNLVVEDDDNGFKTPTSLEHKIPTSLRCPKAPRKPKPRPLTKRKAAERHRLLLDLSTEIQSLFPADFLVGLGGKIKRVRQ
BLAST of Bhi08G000536 vs. TAIR10
Match: AT5G02420.1 (unknown protein)

HSP 1 Score: 43.5 bits (101), Expect = 1.0e-04
Identity = 30/60 (50.00%), Postives = 35/60 (58.33%), Query Frame = 0

Query: 49  GFKTPTSLEHKIP--TSLRCPKAPRKPKPRPL--TKRKAAE---RHRLLLDLSTEIQSLF 102
           G KTPTS +HKIP      CP APRKPKP     TKRK       +R+ +DLS EI+  F
Sbjct: 43  GCKTPTSSDHKIPEVKYTLCPPAPRKPKPNRSSGTKRKLTPVNVVNRIPIDLSREIEMFF 102

BLAST of Bhi08G000536 vs. TAIR10
Match: AT5G59360.1 (unknown protein)

HSP 1 Score: 41.6 bits (96), Expect = 4.0e-04
Identity = 22/53 (41.51%), Postives = 32/53 (60.38%), Query Frame = 0

Query: 67  PKAPRKPKPRPLTKRKA--AERHRLLLDLSTEIQSLFPADFLVGLGGKIKRVR 118
           P+ PRKPK  P  KR+    +R  + LD++ E++S+FP   L   G KIK+ R
Sbjct: 101 PRPPRKPKAIPSMKRRGMWVKRSVVFLDVAREVESMFPPSVLQDFGKKIKKAR 153

BLAST of Bhi08G000536 vs. TrEMBL
Match: tr|A0A0A0LY05|A0A0A0LY05_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G506960 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 6.0e-39
Identity = 106/126 (84.13%), Postives = 109/126 (86.51%), Query Frame = 0

Query: 1   MGLFNSSILLSENDVNSMEFTFLLRYVNS--------XXXXXXXXXXXXXXXXXXXGFKT 60
           MGLFNSSILLSENDVNSMEFTFLLRYVNS        XXXXXXXXXXXXX      GFKT
Sbjct: 1   MGLFNSSILLSENDVNSMEFTFLLRYVNSKEXXXXXXXXXXXXXXXXXXXVEDDDNGFKT 60

Query: 61  PTSLEHKIPTSLRCPKAPRKPKPRPLTKRKAAERHRLLLDLSTEIQSLFPADFLVGLGGK 119
           PTSLEHKIPTSL+CP APRKPKPR LTKRKA ERHRLLLDLS+EIQSLFPA+FLVGLGGK
Sbjct: 61  PTSLEHKIPTSLQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLGGK 120

BLAST of Bhi08G000536 vs. TrEMBL
Match: tr|A0A1S4E1K5|A0A1S4E1K5_CUCME (cyclin-dependent protein kinase inhibitor SMR3-like OS=Cucumis melo OX=3656 GN=LOC107991540 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.3e-37
Identity = 97/128 (75.78%), Postives = 101/128 (78.91%), Query Frame = 0

Query: 1   MGL--FNSSILLSENDVNSMEFTFLLRYVNS--------XXXXXXXXXXXXXXXXXXXGF 60
           MGL  FNSSILLSENDVNSMEFTFLLRYVNS        XXXXX              GF
Sbjct: 1   MGLFDFNSSILLSENDVNSMEFTFLLRYVNSKEDXXXXXXXXXXLNGRSNSVVQDDDNGF 60

Query: 61  KTPTSLEHKIPTSLRCPKAPRKPKPRPLTKRKAAERHRLLLDLSTEIQSLFPADFLVGLG 119
           KTPTSLEHKIPTS++CP APRKPKPR LTKRKA ERHRLLLDLS+EIQSLFPA+FLVGLG
Sbjct: 61  KTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLG 120

BLAST of Bhi08G000536 vs. TrEMBL
Match: tr|A0A2P4HCU5|A0A2P4HCU5_QUESU (Cyclin-dependent protein kinase inhibitor smr3 OS=Quercus suber OX=58331 GN=CFP56_73771 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.8e-19
Identity = 60/118 (50.85%), Postives = 75/118 (63.56%), Query Frame = 0

Query: 1   MGLFNSSILLSENDVNSMEFTFLLRYVNSXXXXXXXXXXXXXXXXXXXGFKTPTSLEHKI 60
           MG+ +S + L+E D+NSME  FL++  +                    GF+TPTSL+HKI
Sbjct: 11  MGVSDSQMFLTEKDLNSMELNFLVKVPS--------LGELRDVEDDDDGFRTPTSLDHKI 70

Query: 61  PTSLRCPKAPRKPKPRPLTKRKAAERHRLLLDLSTEIQSLFPADFLVGLGGKIKRVRQ 119
           P SLRCP APRKPKP P TKRKA  R R++LDLS EI SLFP   LV L  KIK++R+
Sbjct: 71  PESLRCPPAPRKPKPIPSTKRKAG-RRRIMLDLSNEIDSLFPPALLVDLRVKIKKIRR 119

BLAST of Bhi08G000536 vs. TrEMBL
Match: tr|A0A2N9ECP2|A0A2N9ECP2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS397 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 6.0e-15
Identity = 47/70 (67.14%), Postives = 55/70 (78.57%), Query Frame = 0

Query: 50  FKTPTSLEHKIPTSLRCPKAPRKPKPR--PLTKRKAAERHRLLLDLSTEIQSLFPADFLV 109
           FKTPTSL+HKIP  L+CP APRKPKP+  P TKRKA  R R+LLDLS EI+S+FP   LV
Sbjct: 91  FKTPTSLDHKIPVILQCPPAPRKPKPKSIPSTKRKAG-RRRILLDLSIEIESMFPPALLV 150

Query: 110 GLGGKIKRVR 118
            L GKIK++R
Sbjct: 151 DLSGKIKKIR 159

BLAST of Bhi08G000536 vs. TrEMBL
Match: tr|B9T5R7|B9T5R7_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0449900 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.9e-15
Identity = 46/70 (65.71%), Postives = 50/70 (71.43%), Query Frame = 0

Query: 49  GFKTPTSLEHKIPTSLRCPKAPRKPKPRPLTKRKAAERHRLLLDLSTEIQSLFPADFLVG 108
           G KTPTSL HKIPT L CP APRKPK  P  KRK+  R R+LLDLS EI+SLFP      
Sbjct: 97  GCKTPTSLNHKIPTLLPCPPAPRKPKSLPSNKRKSPARRRVLLDLSNEIESLFPPALRAD 156

Query: 109 LGGKIKRVRQ 119
           LG KIK+VRQ
Sbjct: 157 LGAKIKKVRQ 166

BLAST of Bhi08G000536 vs. NCBI nr
Match: XP_011658114.1 (PREDICTED: cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis sativus] >KGN65712.1 hypothetical protein Csa_1G506960 [Cucumis sativus])

HSP 1 Score: 169.1 bits (427), Expect = 9.1e-39
Identity = 106/126 (84.13%), Postives = 109/126 (86.51%), Query Frame = 0

Query: 1   MGLFNSSILLSENDVNSMEFTFLLRYVNS--------XXXXXXXXXXXXXXXXXXXGFKT 60
           MGLFNSSILLSENDVNSMEFTFLLRYVNS        XXXXXXXXXXXXX      GFKT
Sbjct: 1   MGLFNSSILLSENDVNSMEFTFLLRYVNSKEXXXXXXXXXXXXXXXXXXXVEDDDNGFKT 60

Query: 61  PTSLEHKIPTSLRCPKAPRKPKPRPLTKRKAAERHRLLLDLSTEIQSLFPADFLVGLGGK 119
           PTSLEHKIPTSL+CP APRKPKPR LTKRKA ERHRLLLDLS+EIQSLFPA+FLVGLGGK
Sbjct: 61  PTSLEHKIPTSLQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLGGK 120

BLAST of Bhi08G000536 vs. NCBI nr
Match: XP_016902107.1 (PREDICTED: cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis melo])

HSP 1 Score: 163.3 bits (412), Expect = 5.0e-37
Identity = 97/128 (75.78%), Postives = 101/128 (78.91%), Query Frame = 0

Query: 1   MGL--FNSSILLSENDVNSMEFTFLLRYVNS--------XXXXXXXXXXXXXXXXXXXGF 60
           MGL  FNSSILLSENDVNSMEFTFLLRYVNS        XXXXX              GF
Sbjct: 1   MGLFDFNSSILLSENDVNSMEFTFLLRYVNSKEDXXXXXXXXXXLNGRSNSVVQDDDNGF 60

Query: 61  KTPTSLEHKIPTSLRCPKAPRKPKPRPLTKRKAAERHRLLLDLSTEIQSLFPADFLVGLG 119
           KTPTSLEHKIPTS++CP APRKPKPR LTKRKA ERHRLLLDLS+EIQSLFPA+FLVGLG
Sbjct: 61  KTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLG 120

BLAST of Bhi08G000536 vs. NCBI nr
Match: POE54100.1 (cyclin-dependent protein kinase inhibitor smr3 [Quercus suber])

HSP 1 Score: 104.4 bits (259), Expect = 2.7e-19
Identity = 60/118 (50.85%), Postives = 75/118 (63.56%), Query Frame = 0

Query: 1   MGLFNSSILLSENDVNSMEFTFLLRYVNSXXXXXXXXXXXXXXXXXXXGFKTPTSLEHKI 60
           MG+ +S + L+E D+NSME  FL++  +                    GF+TPTSL+HKI
Sbjct: 11  MGVSDSQMFLTEKDLNSMELNFLVKVPS--------LGELRDVEDDDDGFRTPTSLDHKI 70

Query: 61  PTSLRCPKAPRKPKPRPLTKRKAAERHRLLLDLSTEIQSLFPADFLVGLGGKIKRVRQ 119
           P SLRCP APRKPKP P TKRKA  R R++LDLS EI SLFP   LV L  KIK++R+
Sbjct: 71  PESLRCPPAPRKPKPIPSTKRKAG-RRRIMLDLSNEIDSLFPPALLVDLRVKIKKIRR 119

BLAST of Bhi08G000536 vs. NCBI nr
Match: XP_023897807.1 (cyclin-dependent protein kinase inhibitor SMR3-like [Quercus suber])

HSP 1 Score: 92.8 bits (229), Expect = 8.3e-16
Identity = 48/70 (68.57%), Postives = 55/70 (78.57%), Query Frame = 0

Query: 49  GFKTPTSLEHKIPTSLRCPKAPRKPKPRPLTKRKAAERHRLLLDLSTEIQSLFPADFLVG 108
           GF+TPTSL+HKIP SLRCP APRKPKP P TKRKA  R R++LDLS EI SLFP   LV 
Sbjct: 106 GFRTPTSLDHKIPESLRCPPAPRKPKPIPSTKRKAG-RRRIMLDLSNEIDSLFPPALLVD 165

Query: 109 LGGKIKRVRQ 119
           L  KIK++R+
Sbjct: 166 LRVKIKKIRR 174

BLAST of Bhi08G000536 vs. NCBI nr
Match: XP_021677964.1 (cyclin-dependent protein kinase inhibitor SMR10-like [Hevea brasiliensis])

HSP 1 Score: 90.1 bits (222), Expect = 5.4e-15
Identity = 63/171 (36.84%), Postives = 76/171 (44.44%), Query Frame = 0

Query: 1   MGLFNSSILLSENDVNSMEFTFLLR----------------------------------- 60
           MG+ N  + LSEND+NSMEF FL+R                                   
Sbjct: 11  MGVSNPEMFLSENDLNSMEFNFLVRPALEFEDEYRIAPLLDGDDQDDLHXXXXXXXXXXX 70

Query: 61  ------------------YVNSXXXXXXXXXXXXXXXXXXXGFKTPTSLEHKIPTSLRCP 119
                              V++                   GFKTPTSL+ KIP  L CP
Sbjct: 71  XXXXXXXXXXXXXXXCKLLVSTLKIKLPSLGEFKIEEDLDDGFKTPTSLDQKIPVILPCP 130

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
AT5G02420.11.0e-0450.00unknown protein[more]
AT5G59360.14.0e-0441.51unknown protein[more]
Match NameE-valueIdentityDescription
tr|A0A0A0LY05|A0A0A0LY05_CUCSA6.0e-3984.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G506960 PE=4 SV=1[more]
tr|A0A1S4E1K5|A0A1S4E1K5_CUCME3.3e-3775.78cyclin-dependent protein kinase inhibitor SMR3-like OS=Cucumis melo OX=3656 GN=L... [more]
tr|A0A2P4HCU5|A0A2P4HCU5_QUESU1.8e-1950.85Cyclin-dependent protein kinase inhibitor smr3 OS=Quercus suber OX=58331 GN=CFP5... [more]
tr|A0A2N9ECP2|A0A2N9ECP2_FAGSY6.0e-1567.14Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS397 PE=4 SV=1[more]
tr|B9T5R7|B9T5R7_RICCO7.9e-1565.71Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0449900 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_011658114.19.1e-3984.13PREDICTED: cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis sativus]... [more]
XP_016902107.15.0e-3775.78PREDICTED: cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis melo][more]
POE54100.12.7e-1950.85cyclin-dependent protein kinase inhibitor smr3 [Quercus suber][more]
XP_023897807.18.3e-1668.57cyclin-dependent protein kinase inhibitor SMR3-like [Quercus suber][more]
XP_021677964.15.4e-1536.84cyclin-dependent protein kinase inhibitor SMR10-like [Hevea brasiliensis][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045839 negative regulation of mitotic nuclear division
biological_process GO:0016310 phosphorylation
biological_process GO:0032875 regulation of DNA endoreduplication
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0016301 kinase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M000536Bhi08M000536mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..82
NoneNo IPR availablePANTHERPTHR33142:SF17CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR2-RELATEDcoord: 31..118
NoneNo IPR availablePANTHERPTHR33142FAMILY NOT NAMEDcoord: 31..118

The following gene(s) are paralogous to this gene:

None