Bhi08G000397 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi08G000397
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	SAGA-associated factor 11
Location	chr8 : 16144796 .. 16148884 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGATACCCTCGTCTTCTTTTCGATGAAGCTTCCCTCTTTTTGTAGTCTTCTCGGATCCCACTGTGCTTGGATTTGTAAACTCTGTTCATTTTTGCTGCGAATTCAACTTCATATAAGTAAGTACAGCTATATCTTTCTGCATTTTTCTGTATTCCTCATTGATTTCGCTAACTTACGAACATTTTTCCAGTAAATAATTTCCAAGAAATGTTGTGTTTGATGCCAGTTTGCAATATTTAGAATGTTAAGAGATTTTTCTTTCCTTTTTGTATTTTGTTTGATCGGTTAGTTTTACAAGTTTGATTAATTTCAGAAAATGTGTAAATCTTCTCGTTAGTCTCTTATTCAACTTCAGGTTTTGAATAGATTGATGATCCTTTAAATTGGATTTATTTTCTGTACTGTATTGCTTGAAATTGGATAAATCGCTGTGTTTAATGACATTTGCCCCGGTTATTATGTTTCTAGGCCTATATTGAAACTCCTTCTGCTTCTAGATCCATGTCGATGCCGAATGAGGACAATGCATCTTCACAAACTCAGGTGGCGTTTCCCTTTATATTTCTTCTTCTTTTTCTTATTTGCATTTAGCACCTTAGTGTATGAATAATGAGAAATGAAGGTAGTAGCTATAATGGCTTTGTTTACAGTGAAGAATAAAAACTTAAATTAATTATTGCTATGGAATATGCGAGTAACAAGAGAACAATGGAATTATAACGTTGATGTTGCCCTGAAGTATTTTGAGCGTCTGCAATCCATCGGTTCTCGAATTAGTTACCTCCTAGAAAAAAGAACAATGGTACTGTACCACTGTTATAAACGGCTTACAAGCCTAACAGTCTTACTTGTTTAACTTACAAGCTATTAAATAATCCTAATGTAATCAACCAAACCGGTTACTAACCACAAAGAAACTACTCAATCAGTAAGCTTTCTTTCACAGACTTCCCTCAGTTTAATGATACTCAACCAGATTGTTCCCTCGAAATTGTATTTTCGTTCTCTGTGAGATTCCTTTGCAGTAAGTTTTCTTTATTTTCATTGGTATGTTCCAGTAATAGAATTGTAAAAAATATGAAGCCGTGTGTGTGCAATATATGATATTTCTTCCTGGATTGTTAAGAAGATTGAGATGCACCTGGCTGGTTCTTTTGAAAGATTTTTTTAGCAATGGTCTGTAAACATTCTAAAGGCGTCTCAAGCTTTTTCTCTTAAAGAGGTCAGGGATAAACCTCAAGGTGGCATGAGACATTAACATCAATTTTAATAAAAATTTATACAAATCCAAAATTTGTATGATCATTTATATGTATATTAATTTGGTAAGAAACCAAGCTTTCATAAAAAAAATAGAAGATTACAAGGACATACAAAAAACAAGTCCAAACATAAGAGTCCCAAAGAAAAAAGAATCGGGAGAGAACTCCAATCCAAAGAAGAAAAAATAGAAGACAATGGTCATAATTACAAAGAGGCCTAGTAACCGAGGCCTAAAGGGAGGCATTAAACCTAGCCATTTCCCAATTTTCTCACTCAAATGCTCAACCTCACAAGTCACAAGGAGTGACCTCTTAAATAAAAAATAATGGTTATGTAAATACAAAAATTGATCAGTCCGGTAAATGGCCACTTCAATACAAAGAATTAACTGGTCATTCTTAATGTCACCACTATCATCACTAAGCCTAGGTCGTAAAGATACCAATAGGTTAGACTGCCACAATTCATGTATTAGCCTTACTTTTTCATTGAAATGTTTCTTTTCTGAAGAAAATAAAAGAAAATGTATTAGCATTACATACACAAAAAAAAAACTTCTATTTTTCTTAATAATGGGGCAAATTAATATTATTCTTCTAGCTAATATATGGGGTATAAAGACTTTGAACCTTTGGTGTGTTTGCATTGAGTCATAATGCCCTAAGAAGCATGGACACCAACACACGACACGGCGATACGACGACACGCCAATTTTAAAAAAAGTAGGACACGACACGTCGGGGCCACGTTATTTTTTTTTATTAAAAAAATTAAATATATGTCGTGAAATAAACATATTGGGAAATATTCCATTTAAAAACATCATTAACAACCATACAACCATAGATAAGATGACTAACGGTCTAATGTCATAAGTCATAACAAGTTTTAGTAATTAGTTGAACACCACAAAAGTTACAAAACCACAAAATAGAATCAAAGAAGCCAAGCCGTATTTTCTTCATTCTTGTCCATGTCCTCTTAACTACTCGAAGCTTCATTCTAATCACCATCATCAGTAAAAACTCTTCCAATTCTGTTCCCCCAAAGATAAACTAGCTACTTCAAGCATTCCCACATCTTCAAATGAATCTCCAATGCCCCACATTTTTGTCTCTCCTTTGAAATATTCAGGAGTTCTTCTTGGGCGTGGCGAAGTTGCCGGCGAGTCTGGACGTGGAGAAGTTGAACGAAGTTTGGGCGTGGAGAAGTTGTTGCCGGTGTGTCTGGGTGTGGAGAAATTGCCGGCGTGGTGTTTTGGGCGTGGAGGTGTGGCCGGCCGTCGATCGAGTGGGCGTGGAGGCGTGGCGTTTTGGGCATGGGGACTCGGGAGTTTTGATATTTTGAAGAAAAGAAAAGTGGAAAGGAATAATATATTTTGAGAAATTAAAATAAAAAACACAACCACCTAAAAGTTTTGGGCTTGGGCTGATGCTTTTGGGCTGCTAACTTTAGTTTTATAAGCTTTCATTGTTTTTTCTTTTTAATTTTTCCGTGCCGTGTCCCAACCGTGTCCCCGTCGTGTTGGAAATTTAAAAGAATAATAAAATATAGCTGGCGTGTCGGACACATGTCGGAGGCGTGTCGGGGCGTGTCGGTGTTGGACACATGTCCGACACTGACAATTGGCCATCTTAGGAGTGTCGGTGCTTTATAGATAATGCCTTTTATGCTCCAAAGAAGGTGTACGAGTTTCAAGGCTAAGAGTGAGATTCTTGTCTCAAGGTGTAATCTTTGAAAGTATTTTATTACATTGGTTAGCAAGCACCTAGCCAACATGTCTAGCCCAATGAATTATTTGAAAGCTTCGTCTAACTTCCTTAATGTGAGAAAAGGCTTAGTCTAAGTATGGGTGATGTGTCAATCATTTCATGGAAACCAAAGAAGTATAATAATTAGTAATCAATTTTGACTTCCTTACAACTAATGGAACTGGAACTTCTGTTGCTTTCTGGTCATATTTGCAGCTGTCATCTAATTTGTTTGGAGATCTTCTGGATTCTGTGATTGTTGATATTGCATCGGAATGTCATCGAATAGCAAGATTAGGTCTTGATCGTAACTTAGAAGAGGAAGAAGAAGAATTAAGACTTTCAGCACAGGCACGAGTAAGAGTAGCTGATTCTAGCAATAGTAGTGAAGCAAACGGAAAATATGTAGTTGATATTTTTGGACAAACTCATCCTTCTGTTGCGAACGAAATATTTGATTGCATGAATTGTGGTCGATCAATTATGGCTGGGAGATTTGCCCCTCATTTAGAGAAATGCATGGGAAGGGTAACTCTCTGCCCCTTTTAATATATGTTTTTCAGACACATTCTGCTTTTATTTTGTTGATCTCTTTTCACTTTGTCTCATCAACTGTCTACTCTGCTATAGGGTAGAAAGGCTCGTCCCAAAGTGACAAGAAGTAGTACAGCTGCCCAGAGCCGATATTCACGAGGCAATCCTGTTTCTGCGTATTCCCCTTACTCTAATTCCACCAGCACGAATCGCTTACTTAATGGAACGTCTAGTCTTGCAGGGGAGGAGTACTCAAATGGTATATCTGAAGACCCATGAACAATAGAGCAATGGCCAAATTATTCCAATTTAGGAAAAACATACTGTAATCTAAATGTGCTTGCAGGAACATAATGATACCTGCTGCCATGTTCAGTTTTATTGTACATGACTTCTTTATGTGAGCTATCATTAATGACATGGGAAAAAATATATCATGTCTGGAATCTGGATGTACTATGAGTTCATCATTACTTTCAACTGTCCCAAATTTTGATGCTGAAGATCTTGTACAGAAGTTCGAAAAAAAAGGAATCTCATG

mRNA sequence

CGATACCCTCGTCTTCTTTTCGATGAAGCTTCCCTCTTTTTGTAGTCTTCTCGGATCCCACTGTGCTTGGATTTGTAAACTCTGTTCATTTTTGCTGCGAATTCAACTTCATATAAGTAAGTACAGCTATATCTTTCTGCATTTTTCTGTATTCCTCATTGATTTCGCTAACTTACGAACATTTTTCCAGCCTATATTGAAACTCCTTCTGCTTCTAGATCCATGTCGATGCCGAATGAGGACAATGCATCTTCACAAACTCAGCTGTCATCTAATTTGTTTGGAGATCTTCTGGATTCTGTGATTGTTGATATTGCATCGGAATGTCATCGAATAGCAAGATTAGGTCTTGATCGTAACTTAGAAGAGGAAGAAGAAGAATTAAGACTTTCAGCACAGGCACGAGTAAGAGTAGCTGATTCTAGCAATAGTAGTGAAGCAAACGGAAAATATGTAGTTGATATTTTTGGACAAACTCATCCTTCTGTTGCGAACGAAATATTTGATTGCATGAATTGTGGTCGATCAATTATGGCTGGGAGATTTGCCCCTCATTTAGAGAAATGCATGGGAAGGGGTAGAAAGGCTCGTCCCAAAGTGACAAGAAGTAGTACAGCTGCCCAGAGCCGATATTCACGAGGCAATCCTGTTTCTGCGTATTCCCCTTACTCTAATTCCACCAGCACGAATCGCTTACTTAATGGAACGTCTAGTCTTGCAGGGGAGGAGTACTCAAATGGTATATCTGAAGACCCATGAACAATAGAGCAATGGCCAAATTATTCCAATTTAGGAAAAACATACTGTAATCTAAATGTGCTTGCAGGAACATAATGATACCTGCTGCCATGTTCAGTTTTATTGTACATGACTTCTTTATGTGAGCTATCATTAATGACATGGGAAAAAATATATCATGTCTGGAATCTGGATGTACTATGAGTTCATCATTACTTTCAACTGTCCCAAATTTTGATGCTGAAGATCTTGTACAGAAGTTCGAAAAAAAAGGAATCTCATG

Coding sequence (CDS)

ATGTCGATGCCGAATGAGGACAATGCATCTTCACAAACTCAGCTGTCATCTAATTTGTTTGGAGATCTTCTGGATTCTGTGATTGTTGATATTGCATCGGAATGTCATCGAATAGCAAGATTAGGTCTTGATCGTAACTTAGAAGAGGAAGAAGAAGAATTAAGACTTTCAGCACAGGCACGAGTAAGAGTAGCTGATTCTAGCAATAGTAGTGAAGCAAACGGAAAATATGTAGTTGATATTTTTGGACAAACTCATCCTTCTGTTGCGAACGAAATATTTGATTGCATGAATTGTGGTCGATCAATTATGGCTGGGAGATTTGCCCCTCATTTAGAGAAATGCATGGGAAGGGGTAGAAAGGCTCGTCCCAAAGTGACAAGAAGTAGTACAGCTGCCCAGAGCCGATATTCACGAGGCAATCCTGTTTCTGCGTATTCCCCTTACTCTAATTCCACCAGCACGAATCGCTTACTTAATGGAACGTCTAGTCTTGCAGGGGAGGAGTACTCAAATGGTATATCTGAAGACCCATGA

Protein sequence

MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSPYSNSTSTNRLLNGTSSLAGEEYSNGISEDP

Homology

[Close]

BLAST of Bhi08G000397 vs. Swiss-Prot
Match: sp|A1L209|AT7L3_DANRE (Ataxin-7-like protein 3 OS=Danio rerio OX=7955 GN=atxn7l3 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.5e-07
Identity = 39/125 (31.20%), Postives = 55/125 (44.00%), Query Frame = 0


Query: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLG---LDRNLEXXXXXXXXX 60
           MS+   DN   +  L+ +++ DL++   + +  E HR  + G   LD   +         
Sbjct: 6   MSLSGLDNTKLEA-LAHDVYSDLVEDACLGLCFEVHRAVKQGYFFLDETDQESMKDFEIV 65

Query: 61  XXXXXXXXXXXXXXXANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMG 120
                                VDIFGQ +    N+   C NC RSI A RFAPHLEKC+G
Sbjct: 66  DQPG-----------------VDIFGQVYNQWKNKECVCPNCSRSIAASRFAPHLEKCLG 112

Query: 121 RGRKA 123
            GR +
Sbjct: 126 MGRNS 112

[Close]

BLAST of Bhi08G000397 vs. Swiss-Prot
Match: sp|Q14CW9|AT7L3_HUMAN (Ataxin-7-like protein 3 OS=Homo sapiens OX=9606 GN=ATXN7L3 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.6e-06
Identity = 24/44 (54.55%), Postives = 29/44 (65.91%), Query Frame = 0


Query: 79  VDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGRKA 123
           +DIFGQ      ++   C NC RSI A RFAPHLEKC+G GR +
Sbjct: 69  LDIFGQVFNQWKSKECVCPNCSRSIAASRFAPHLEKCLGMGRNS 112

[Close]

BLAST of Bhi08G000397 vs. Swiss-Prot
Match: sp|A2AWT3|AT7L3_MOUSE (Ataxin-7-like protein 3 OS=Mus musculus OX=10090 GN=Atxn7l3 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.6e-06
Identity = 24/44 (54.55%), Postives = 29/44 (65.91%), Query Frame = 0


Query: 79  VDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGRKA 123
           +DIFGQ      ++   C NC RSI A RFAPHLEKC+G GR +
Sbjct: 69  LDIFGQVFNQWKSKECVCPNCSRSIAASRFAPHLEKCLGMGRNS 112

[Close]

BLAST of Bhi08G000397 vs. Swiss-Prot
Match: sp|B0W8L4|SGF11_CULQU (SAGA-associated factor 11 homolog OS=Culex quinquefasciatus OX=7176 GN=Sgf11 PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.0e-05
Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 0


Query: 79  VDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGRKA 123
           +D+FG T+   A +   C NC R + A RFAPHLEKCMG GR +
Sbjct: 84  MDVFGSTNSKKAIDC-SCPNCNRIVAASRFAPHLEKCMGMGRNS 126

[Close]

BLAST of Bhi08G000397 vs. Swiss-Prot
Match: sp|Q751G1|SGF11_ASHGO (SAGA-associated factor 11 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=SGF11 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.4e-05
Identity = 20/43 (46.51%), Postives = 28/43 (65.12%), Query Frame = 0


Query: 79  VDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGRK 122
           +D++G+  P  A+  F C NC R + A RFA HLE+CM RG +
Sbjct: 61  LDVYGRPKPQEASVYFRCPNCSRDLSANRFAAHLERCMSRGAR 103

[Close]

BLAST of Bhi08G000397 vs. TAIR10
Match: AT5G58575.1 (Sgf11, transcriptional regulation (InterPro:IPR013246))

HSP 1 Score: 180.3 bits (456), Expect = 1.1e-45
Identity = 94/167 (56.29%), Postives = 114/167 (68.26%), Query Frame = 0


Query: 6   EDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEXXXXXXXXXXXXXXXXX 65
           EDN SS  QLSS +F DL+DSVI D+ASECHR+ARLGLDR+L+                 
Sbjct: 5   EDNKSSHAQLSSQIFLDLVDSVIADVASECHRVARLGLDRDLDIVEEELRLSVEARAKIA 64

Query: 66  XXXXXXXANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGRKARPK 125
                   N KYVVDIFGQTHP VA+E+F+CMNCGR I+AGRFAPHLEKCMG+GRKAR K
Sbjct: 65  DPSNNLETNTKYVVDIFGQTHPPVASEVFNCMNCGRQIVAGRFAPHLEKCMGKGRKARAK 124

Query: 126 VTRSSTAAQSRYSRGNPVSAYSPYSNSTSTNRLLNGTSSLAGEEYSN 173
            TRS+TAAQ+R +R +         NS S N+L +G+  +AGE+ SN
Sbjct: 125 TTRSTTAAQNRNARRSXXXXXXXXXNSASENQLASGSPGVAGEDCSN 171

[Close]

BLAST of Bhi08G000397 vs. TrEMBL
Match: tr|A0A0A0LYA8|A0A0A0LYA8_CUCSA (SAGA-associated factor 11 OS=Cucumis sativus OX=3659 GN=Csa_1G533390 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 6.0e-75
Identity = 175/178 (98.31%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEXXXXXXXXXXXX 60
           MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEXXXXXXXXXXXX
Sbjct: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120
           XXXXXXXXXXXXANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR
Sbjct: 61  XXXXXXXXXXXXANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120

Query: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYSNSTSTNRLLNGTSSLAGEEYSNGISEDP 179
           KARPKVTRSSTAAQSRYSRGNPVSAYSPY NSTSTNRL NGTSSLAGEEYSNG SEDP
Sbjct: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP 178

[Close]

BLAST of Bhi08G000397 vs. TrEMBL
Match: tr|A0A1S3C599|A0A1S3C599_CUCME (SAGA-associated factor 11 OS=Cucumis melo OX=3656 GN=LOC103497054 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 7.8e-75
Identity = 174/178 (97.75%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEXXXXXXXXXXXX 60
           MSMPNEDNASSQTQLSSNLFGDLLDSVIVD+ASECHRIARLGLDRNLEXXXXXXXXXXXX
Sbjct: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120
           XXXXXXXXXXXXANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR
Sbjct: 61  XXXXXXXXXXXXANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120

Query: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYSNSTSTNRLLNGTSSLAGEEYSNGISEDP 179
           KARPKVTRSSTAAQSRYSRGNPVSAYSPY NSTSTNRL NGTSSLAGEEYSNG SEDP
Sbjct: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP 178

[Close]

BLAST of Bhi08G000397 vs. TrEMBL
Match: tr|B9GGQ7|B9GGQ7_POPTR (SAGA-associated factor 11 OS=Populus trichocarpa OX=3694 GN=POPTR_001G279700v3 PE=3 SV=2)

HSP 1 Score: 245.4 bits (625), Expect = 1.0e-61
Identity = 126/178 (70.79%), Postives = 136/178 (76.40%), Query Frame = 0


Query: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEXXXXXXXXXXXX 60
           MS+PNEDN S   QLSS+ FGDLLDS+IVD+ASECHR+ARLGLDRNLE            
Sbjct: 1   MSVPNEDNMSPHMQLSSHFFGDLLDSIIVDVASECHRVARLGLDRNLEEEEEELRLSAQA 60

Query: 61  XXXXXXXXXXXXANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120
                        NGKYVVDIFGQTHP VANE+FDCMNCGR I+AGRFAPHLEKCMG+GR
Sbjct: 61  RVTVADPSNSGETNGKYVVDIFGQTHPCVANEVFDCMNCGRPIVAGRFAPHLEKCMGKGR 120

Query: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYSNSTSTNRLLNGTSSLAGEEYSNGISEDP 179
           KAR K TRSSTAAQ+RYSRG+PVSA SPYSNSTSTNRLLNGT S   EEYSNG  E P
Sbjct: 121 KARAKATRSSTAAQNRYSRGSPVSANSPYSNSTSTNRLLNGTYSHTVEEYSNGTCEGP 178

[Close]

BLAST of Bhi08G000397 vs. TrEMBL
Match: tr|A0A2N9IGQ6|A0A2N9IGQ6_FAGSY (SAGA-associated factor 11 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51152 PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.7e-61
Identity = 140/178 (78.65%), Postives = 158/178 (88.76%), Query Frame = 0


Query: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEXXXXXXXXXXXX 60
           MSMPNEDN +S  QLSS+  GDLLDS+IVD+ASECHRIARLGLDRN  XXXXXXXXXXXX
Sbjct: 1   MSMPNEDNMASHAQLSSHFLGDLLDSIIVDVASECHRIARLGLDRNSXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120
           XXXXXX      AN KYVVDIFGQ+HPSVA+E+FDCMNCGR I+AGRFAPHLEKCMG+GR
Sbjct: 61  XXXXXXPSNSSEANSKYVVDIFGQSHPSVASEVFDCMNCGRFIVAGRFAPHLEKCMGKGR 120

Query: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYSNSTSTNRLLNGTSSLAGEEYSNGISEDP 179
           KARPKVTRS+TAAQ+RYSRG+PVS YSPY+NS+S+NRL NGTS +AGEEYSNG  ++P
Sbjct: 121 KARPKVTRSTTAAQNRYSRGSPVSTYSPYANSSSSNRLSNGTSGVAGEEYSNGTFQEP 178

[Close]

BLAST of Bhi08G000397 vs. TrEMBL
Match: tr|A0A2P2JW89|A0A2P2JW89_RHIMU (SAGA-associated factor 11 OS=Rhizophora mucronata OX=61149 PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 2.5e-60
Identity = 124/178 (69.66%), Postives = 141/178 (79.21%), Query Frame = 0


Query: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEXXXXXXXXXXXX 60
           MS+PN+D+ S Q QLSS+ F DLLDS+IVD+ASECHRIARLGLDRNLE  XXX       
Sbjct: 1   MSVPNDDSVSPQNQLSSHFFADLLDSIIVDVASECHRIARLGLDRNLEEEXXXLRLSAQA 60

Query: 61  XXXXXXXXXXXXANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120
                        N KYVVDIFGQTHP+VANE+F+CMNCGRSI+AGRFAPHLEKCMG+GR
Sbjct: 61  RAKVADPSNSGETNSKYVVDIFGQTHPAVANEVFECMNCGRSIVAGRFAPHLEKCMGKGR 120

Query: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYSNSTSTNRLLNGTSSLAGEEYSNGISEDP 179
           KAR KVTRSSTAAQ+R+SR +PVS YSPYSNS STNRL NGT+  +GEEYSNG  E+P
Sbjct: 121 KARLKVTRSSTAAQNRFSRSSPVSTYSPYSNSASTNRLSNGTAGHSGEEYSNGTLEEP 178

[Close]

BLAST of Bhi08G000397 vs. NCBI nr
Match: XP_004153719.1 (PREDICTED: ataxin-7-like protein 3 [Cucumis sativus] >XP_011658722.1 PREDICTED: ataxin-7-like protein 3 [Cucumis sativus] >KGN65832.1 hypothetical protein Csa_1G533390 [Cucumis sativus])

HSP 1 Score: 289.3 bits (739), Expect = 9.1e-75
Identity = 175/178 (98.31%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEXXXXXXXXXXXX 60
           MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEXXXXXXXXXXXX
Sbjct: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120
           XXXXXXXXXXXXANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR
Sbjct: 61  XXXXXXXXXXXXANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120

Query: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYSNSTSTNRLLNGTSSLAGEEYSNGISEDP 179
           KARPKVTRSSTAAQSRYSRGNPVSAYSPY NSTSTNRL NGTSSLAGEEYSNG SEDP
Sbjct: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP 178

[Close]

BLAST of Bhi08G000397 vs. NCBI nr
Match: XP_008457340.1 (PREDICTED: ataxin-7-like protein 3 [Cucumis melo] >XP_008457341.1 PREDICTED: ataxin-7-like protein 3 [Cucumis melo])

HSP 1 Score: 288.9 bits (738), Expect = 1.2e-74
Identity = 174/178 (97.75%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEXXXXXXXXXXXX 60
           MSMPNEDNASSQTQLSSNLFGDLLDSVIVD+ASECHRIARLGLDRNLEXXXXXXXXXXXX
Sbjct: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120
           XXXXXXXXXXXXANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR
Sbjct: 61  XXXXXXXXXXXXANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120

Query: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYSNSTSTNRLLNGTSSLAGEEYSNGISEDP 179
           KARPKVTRSSTAAQSRYSRGNPVSAYSPY NSTSTNRL NGTSSLAGEEYSNG SEDP
Sbjct: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP 178

[Close]

BLAST of Bhi08G000397 vs. NCBI nr
Match: XP_022970596.1 (ataxin-7-like protein 3 isoform X2 [Cucurbita maxima] >XP_022970597.1 ataxin-7-like protein 3 isoform X2 [Cucurbita maxima] >XP_022970598.1 ataxin-7-like protein 3 isoform X2 [Cucurbita maxima] >XP_022970599.1 ataxin-7-like protein 3 isoform X2 [Cucurbita maxima])

HSP 1 Score: 273.1 bits (697), Expect = 6.7e-70
Identity = 144/178 (80.90%), Postives = 147/178 (82.58%), Query Frame = 0


Query: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEXXXXXXXXXXXX 60
           MSMP+ED+ASS TQLS NLFGDLLDSVI D+ASECHRIARLGLDRNLE            
Sbjct: 1   MSMPHEDSASSHTQLSFNLFGDLLDSVIADVASECHRIARLGLDRNLEEEEEELRLSAQA 60

Query: 61  XXXXXXXXXXXXANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120
                       ANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR
Sbjct: 61  RERVADSCNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120

Query: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYSNSTSTNRLLNGTSSLAGEEYSNGISEDP 179
           KARPKVTRSSTAAQSRYSRGNPVS YSPY NSTSTNRL NGTSSLAGEEYSNG SEDP
Sbjct: 121 KARPKVTRSSTAAQSRYSRGNPVS-YSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP 177

[Close]

BLAST of Bhi08G000397 vs. NCBI nr
Match: XP_022150963.1 (ataxin-7-like protein 3 [Momordica charantia] >XP_022150964.1 ataxin-7-like protein 3 [Momordica charantia])

HSP 1 Score: 260.4 bits (664), Expect = 4.5e-66
Identity = 157/178 (88.20%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEXXXXXXXXXXXX 60
           MSMPNE++ASS TQLSSN FGDLLDSVIVD+ASECHRIARLGLDRNLEXXXXXXXXXXXX
Sbjct: 1   MSMPNEEHASSHTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120
           XXXXXXXXXXX ANGKY+VDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR
Sbjct: 61  XXXXXXXXXXXEANGKYIVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120

Query: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYSNSTSTNRLLNGTSSLAGEEYSNGISEDP 179
           KAR KVTRSSTAAQ RYSRG+PV AYSPY++S   NRL NG S +AGEEYSNG SEDP
Sbjct: 121 KARLKVTRSSTAAQGRYSRGSPVPAYSPYTSSPGANRLPNGMSGVAGEEYSNGTSEDP 178

[Close]

BLAST of Bhi08G000397 vs. NCBI nr
Match: XP_022949027.1 (SAGA-associated factor 11 homolog isoform X2 [Cucurbita moschata] >XP_023523179.1 SAGA-associated factor 11 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253.1 bits (645), Expect = 7.2e-64
Identity = 160/178 (89.89%), Postives = 166/178 (93.26%), Query Frame = 0


Query: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEXXXXXXXXXXXX 60
           MSMP+EDNASS  QLSSN FGDLLDSVIVD+ASECHRIARLGLDRNLEXXXXXXXXXXXX
Sbjct: 1   MSMPDEDNASS--QLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120
           XXXXXXXXXXXXANGKYVVDIFGQ HPSVA+EIFDCMNCGRSI+AGRFAPHLEKCMGRGR
Sbjct: 61  XXXXXXXXXXXXANGKYVVDIFGQNHPSVASEIFDCMNCGRSIVAGRFAPHLEKCMGRGR 120

Query: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYSNSTSTNRLLNGTSSLAGEEYSNGISEDP 179
           KAR KVTRSSTA QSRYSRG+ VSAYSPY NSTSTNRL NGTSSLAG EYSNG S +P
Sbjct: 121 KARLKVTRSSTATQSRYSRGSSVSAYSPYPNSTSTNRLPNGTSSLAGGEYSNGPSGEP 176

The following BLAST results are available for this feature:

BLAST of Bhi08G000397 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A1L209\|AT7L3_DANRE	1.5e-07	31.20	Ataxin-7-like protein 3 OS=Danio rerio OX=7955 GN=atxn7l3 PE=2 SV=1	[more]
sp\|Q14CW9\|AT7L3_HUMAN	3.6e-06	54.55	Ataxin-7-like protein 3 OS=Homo sapiens OX=9606 GN=ATXN7L3 PE=1 SV=1	[more]
sp\|A2AWT3\|AT7L3_MOUSE	3.6e-06	54.55	Ataxin-7-like protein 3 OS=Mus musculus OX=10090 GN=Atxn7l3 PE=1 SV=1	[more]
sp\|B0W8L4\|SGF11_CULQU	1.0e-05	52.27	SAGA-associated factor 11 homolog OS=Culex quinquefasciatus OX=7176 GN=Sgf11 PE=...	[more]
sp\|Q751G1\|SGF11_ASHGO	1.4e-05	46.51	SAGA-associated factor 11 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / F...	[more]

BLAST of Bhi08G000397 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G58575.1	1.1e-45	56.29	Sgf11, transcriptional regulation (InterPro:IPR013246)	[more]

BLAST of Bhi08G000397 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LYA8\|A0A0A0LYA8_CUCSA	6.0e-75	98.31	SAGA-associated factor 11 OS=Cucumis sativus OX=3659 GN=Csa_1G533390 PE=3 SV=1	[more]
tr\|A0A1S3C599\|A0A1S3C599_CUCME	7.8e-75	97.75	SAGA-associated factor 11 OS=Cucumis melo OX=3656 GN=LOC103497054 PE=3 SV=1	[more]
tr\|B9GGQ7\|B9GGQ7_POPTR	1.0e-61	70.79	SAGA-associated factor 11 OS=Populus trichocarpa OX=3694 GN=POPTR_001G279700v3 P...	[more]
tr\|A0A2N9IGQ6\|A0A2N9IGQ6_FAGSY	1.7e-61	78.65	SAGA-associated factor 11 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51152 PE=3 SV=...	[more]
tr\|A0A2P2JW89\|A0A2P2JW89_RHIMU	2.5e-60	69.66	SAGA-associated factor 11 OS=Rhizophora mucronata OX=61149 PE=3 SV=1	[more]

BLAST of Bhi08G000397 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004153719.1	9.1e-75	98.31	PREDICTED: ataxin-7-like protein 3 [Cucumis sativus] >XP_011658722.1 PREDICTED: ...	[more]
XP_008457340.1	1.2e-74	97.75	PREDICTED: ataxin-7-like protein 3 [Cucumis melo] >XP_008457341.1 PREDICTED: ata...	[more]
XP_022970596.1	6.7e-70	80.90	ataxin-7-like protein 3 isoform X2 [Cucurbita maxima] >XP_022970597.1 ataxin-7-l...	[more]
XP_022150963.1	4.5e-66	88.20	ataxin-7-like protein 3 [Momordica charantia] >XP_022150964.1 ataxin-7-like prot...	[more]
XP_022949027.1	7.2e-64	89.89	SAGA-associated factor 11 homolog isoform X2 [Cucurbita moschata] >XP_023523179....	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013246	SAGA_su_Sgf11

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035616	histone H2B conserved C-terminal lysine deubiquitination
biological_process	GO:0008150	biological_process
cellular_component	GO:0071819	DUBm complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000397	Bhi08M000397	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.30.160.60		coord: 93..121 e-value: 1.5E-9 score: 39.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..178
None	No IPR available	PANTHER	PTHR15117:SF22	ATAXIN-7-LIKE PROTEIN 3	coord: 1..127
None	No IPR available	PANTHER	PTHR15117	ATAXIN 7 RELATED	coord: 127..177
None	No IPR available	PANTHER	PTHR15117:SF22	ATAXIN-7-LIKE PROTEIN 3	coord: 127..177
None	No IPR available	PANTHER	PTHR15117	ATAXIN 7 RELATED	coord: 1..127
IPR013246	SAGA complex, Sgf11 subunit	PFAM	PF08209	Sgf11	coord: 91..121 e-value: 4.4E-17 score: 61.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi08G000397	Csa1G533390	Cucumber (Chinese Long) v2	cuwgoB048
Bhi08G000397	MELO3C020526	Melon (DHL92) v3.5.1	mewgoB161
Bhi08G000397	ClCG03G000500	Watermelon (Charleston Gray)	wcgwgoB340
Bhi08G000397	CSPI01G24120	Wild cucumber (PI 183967)	cpiwgoB048
Bhi08G000397	Cucsa.151740	Cucumber (Gy14) v1	cgywgoB296
Bhi08G000397	CmaCh01G006910	Cucurbita maxima (Rimu)	cmawgoB0593
Bhi08G000397	Cp4.1LG20g07870	Cucurbita pepo (Zucchini)	cpewgoB0650
Bhi08G000397	Cp4.1LG02g12030	Cucurbita pepo (Zucchini)	cpewgoB0705
Bhi08G000397	CsGy1G023610	Cucumber (Gy14) v2	cgybwgoB045
Bhi08G000397	MELO3C020526.2	Melon (DHL92) v3.6.1	medwgoB164
Bhi08G000397	Carg07052	Silver-seed gourd	carwgoB0630
Bhi08G000397	CsaV3_1G036430	Cucumber (Chinese Long) v3	cucwgoB050
Bhi08G000397	Cla008143	Watermelon (97103) v1	wgowmB471
Bhi08G000397	Cla97C03G051290	Watermelon (97103) v2	wgowmbB470

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi08G000397	Cucurbita maxima (Rimu)	cmawgoB0252
Bhi08G000397	Cucurbita maxima (Rimu)	cmawgoB0886
Bhi08G000397	Cucurbita moschata (Rifu)	cmowgoB0245
Bhi08G000397	Cucurbita moschata (Rifu)	cmowgoB0590
Bhi08G000397	Cucurbita moschata (Rifu)	cmowgoB0882
Bhi08G000397	Cucurbita moschata (Rifu)	cmowgoB0884
Bhi08G000397	Cucurbita pepo (Zucchini)	cpewgoB0549
Bhi08G000397	Bottle gourd (USVL1VR-Ls)	lsiwgoB239
Bhi08G000397	Silver-seed gourd	carwgoB0734
Bhi08G000397	Silver-seed gourd	carwgoB0783