Bhi07G000986 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi07G000986
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr7 : 36679114 .. 36680442 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTAATCGTAAAGGCTATGCTCGACTAGCCGAAGGTTTGGTAAAAATTTACGTAATACTAATAGCATTATTATAATTAGCACTAGAGATAATATATAACAAAATATTTTTTTCCCATGTAGAAAAATTCTTCTTCTTCAACTCCAATTACCCGAGTAGATGTTTGGACAAAAGCACAAGTGAAGAAAGATGGAAAACTCATTAACTCCCAAGTGGCCAAAACTCTTGTTAGATTATTTTTTGTATTTTTTCTTAATTTTTTTATAGGTCTTAAGTCGTATAAATCTCTCTTGTGGGCTTATGTTATTTGCTATAAATTGAGTTATATCTATAGTTTTTTAATGTTGTGAATTCGTGTTCGTCATAAGACATCCCCCCTTTCTCTTAAATGAACTTTTTTTTTTGTTCAGTGCTTTATTGAGTGATCTCTTATTGGCTTGTTGGCATTTTGAGTAGTAATTTAGTTCAAGTAGGAGATTCTAAATGTTGTGAATTCGTGTTCGTCTTAAGGCATTCCCCCCCAAATGAAGTTTTTTTTTTCATGTTCAATGCCTTTATTGAGTTGGTTTTGTTTGAGTGATCTCTTGTTGGCTTGTTGGTATTTTGAGTAGTAATTTTGTTCAAGTAGGAGTTTCTAAATGTTGTGAATTCGTGTTCGTCATAAGTCATCCCCCCTCCCTCCCCTCTCATTTAAATGAACTTTTTCTATGTTAAATGCTTTATTGAGTTGTTTTTTTAGTAATCTCTTGTTGGTTTGTTGGCATTTGAGTAGTAATTTAGTTCAAGTAGGAGTTTCTAAATGTTGTGGATTTGTGTTGGTCATAAGACATCCCCTCTCCCCCTCTTAAATGATCTTTTTTTTTTTTTTTTAATGTTTAATGCTTTATTTAGTTGGTTTTGTTTAAGTGATCTCTTGTTGGCATGTTGTCATTTCAATAATGATTTAGTTCAAGTAGAAGTTTCTAAATGTTGTGAATTTGTGTTGATTATAAGCGCCCCCCCCAACAAAAAAAAATGGCTCATTGACTTCTTGCCATTTGAACGATTTCATGCATTTTTTTCTTAGGAGCATATTGAACAAAAACATGTGGGAACATCTCGTTCAAGTAGTATAATTGACGATGCAATTAGTAGAGTTTTCGGTCCCAATCATGGCCATGTACGAGGATTAGGATTCGGTGTAACTAGATCAAAGTTGTCTACATCAACTCAGGAAGATAAGACTATTGCGTCTCTTGAAAGAAAATGTAACAACCTAACAACAGATGTAGATGAATTGAAAAGCGTGGCAGCTTCCTTAATAAGGGACAAGGTAAAATTGTCCTAA

mRNA sequence

ATGTGTAATCGTAAAGGCTATGCTCGACTAGCCGAAGGTTTGGAGCATATTGAACAAAAACATGTGGGAACATCTCGTTCAAGTAGTATAATTGACGATGCAATTAGTAGAGTTTTCGGATTAGGATTCGGTGTAACTAGATCAAAGTTGTCTACATCAACTCAGGAAGATAAGACTATTGCGTCTCTTGAAAGAAAATGTAACAACCTAACAACAGATGTAGATGAATTGAAAAGCGTGGCAGCTTCCTTAATAAGGGACAAGGTAAAATTGTCCTAA

Coding sequence (CDS)

ATGTGTAATCGTAAAGGCTATGCTCGACTAGCCGAAGGTTTGGAGCATATTGAACAAAAACATGTGGGAACATCTCGTTCAAGTAGTATAATTGACGATGCAATTAGTAGAGTTTTCGGATTAGGATTCGGTGTAACTAGATCAAAGTTGTCTACATCAACTCAGGAAGATAAGACTATTGCGTCTCTTGAAAGAAAATGTAACAACCTAACAACAGATGTAGATGAATTGAAAAGCGTGGCAGCTTCCTTAATAAGGGACAAGGTAAAATTGTCCTAA

Protein sequence

MCNRKGYARLAEGLEHIEQKHVGTSRSSSIIDDAISRVFGLGFGVTRSKLSTSTQEDKTIASLERKCNNLTTDVDELKSVAASLIRDKVKLS

Homology

[Close]

BLAST of Bhi07G000986 vs. NCBI nr
Match: XP_022158575.1 (uncharacterized protein LOC111025029 [Momordica charantia])

HSP 1 Score: 74.3 bits (181), Expect = 2.4e-10
Identity = 41/99 (41.41%), Postives = 61/99 (61.62%), Query Frame = 0


Query: 2   CNRKGYARLAEGLEHIEQKHVGTSRSSSIIDDAISR--------VFGLGFGVTRSKLSTS 61
           C+ KGYARLA   E +   H G S  ++++DDAIS+        V G G GVT+SK  + 
Sbjct: 35  CSHKGYARLA---EEMNTSHEGMSTDNNVVDDAISKALGPDRGYVRGYGHGVTKSKFLSM 94

Query: 62  TQEDKTIASLERKCNNLTTDVDELKSVAASLIRDKVKLS 93
           +Q D TI  L+ +C+ +T+++ ELK + +SL+ DK K S
Sbjct: 95  SQNDNTITFLQERCDRMTSEMTELKYLISSLLADKAKSS 130

[Close]

BLAST of Bhi07G000986 vs. NCBI nr
Match: XP_022154305.1 (uncharacterized protein LOC111021601 isoform X1 [Momordica charantia])

HSP 1 Score: 60.1 bits (144), Expect = 4.6e-06
Identity = 33/89 (37.08%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 14  LEHIEQ--KHVGTSRSSSIIDDAISRVF--------GLGFGVTRSKLSTSTQEDKTIASL 73
           LE ++Q   H G S +++++DDAI +V         G G GVT+SK  + +Q+D TI   
Sbjct: 51  LERLDQNTSHEGMSTNTNVVDDAIGKVLGHDHGYVRGYGHGVTKSKFLSMSQKDNTITFF 110

Query: 74  ERKCNNLTTDVDELKSVAASLIRDKVKLS 93
             +C+ +T+++ ELK + +SL+ DK K S
Sbjct: 111 PEECDRMTSEMTELKYLVSSLLADKAKSS 139

The following BLAST results are available for this feature:

BLAST of Bhi07G000986 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi07G000986 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi07G000986 vs. TrEMBL


Match Name	E-value	Identity	Description

BLAST of Bhi07G000986 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158575.1	2.4e-10	41.41	uncharacterized protein LOC111025029 [Momordica charantia]	[more]
XP_022154305.1	4.6e-06	37.08	uncharacterized protein LOC111021601 isoform X1 [Momordica charantia]	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi07M000986	Bhi07M000986	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 60..80

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi07G000986	Cucumber (Gy14) v1	cgywgoB088
Bhi07G000986	Cucumber (Gy14) v2	cgybwgoB478
Bhi07G000986	Cucurbita maxima (Rimu)	cmawgoB0540
Bhi07G000986	Cucurbita maxima (Rimu)	cmawgoB0892
Bhi07G000986	Cucurbita moschata (Rifu)	cmowgoB0536
Bhi07G000986	Cucurbita moschata (Rifu)	cmowgoB0891
Bhi07G000986	Cucurbita pepo (Zucchini)	cpewgoB0556
Bhi07G000986	Wild cucumber (PI 183967)	cpiwgoB507
Bhi07G000986	Cucumber (Chinese Long) v3	cucwgoB514
Bhi07G000986	Cucumber (Chinese Long) v2	cuwgoB502
Bhi07G000986	Bottle gourd (USVL1VR-Ls)	lsiwgoB391
Bhi07G000986	Melon (DHL92) v3.6.1	medwgoB085
Bhi07G000986	Melon (DHL92) v3.5.1	mewgoB084
Bhi07G000986	Watermelon (Charleston Gray)	wcgwgoB171
Bhi07G000986	Watermelon (97103) v2	wgowmbB516
Bhi07G000986	Watermelon (97103) v1	wgowmB564
Bhi07G000986	Silver-seed gourd	carwgoB0984