Bhi07G000116 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi07G000116
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Pentatricopeptide repeat
Location	chr7 : 7080264 .. 7084831 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAATCCAAAACCTTGACGCCAAAATTTATTTTTCCCTTTAGGCTCATTATTATTAAACCCCGCCGTAAACCCAACTTTCGTTCATCGGCCTCAGAACTGAGAGTCGATCTTTCACTACTGGAAAAAAGCCTACAACGCAACAACAAAGGGAGAAGTTTAGTATCATCATCTTCAATTTTAGGGTTTGGAAATGGATCATCAAAATGTTTCTTTCCACTTAGAATAGCCTCAAAACGTTTCAAATTTCTGTTCAACACGGTATCATCGTCTGTAGAATTGGAGAAATTCGCAGTTCAGTACCACAATTCGTTTCAGAGTTTTCAAAATACCATAGCCACCTCTGCTCGATAGCTTCCTGCAAGATTCAAATGATAAGGTCTGCTGTTTGATGTTCTCCATTTTTTGAAATCTGTTTGATTAAATTTGTGGATTTGCTGGTATTCTAGGCAATGTTTTTAATCTTTGAATTCTATGTGGATTTTGTGATATTGGAATATTAATTGCCCTATTCAAAGAACCACACAACGTAATTCAAAACCTCAAAACCTCAGAGTTCGAAAAGACTTCTCGTGAGATGAATCTATTTGTCCAAAGTATGTTTGCAGTTGTGGTAAAGGGTCATTGGAATCACCTCTTGAAGCCTAAGATTAGTTCTAGCCTCACATCCATATCCATCCACCAGATTCTTCTCCGGCTATCGTTCTACTGTTCAGGTCCTTCACTTTCTTGGGCGTTTTTCAAGTGGGTTGAGTTAATTCCTGATTACAAGCACTCTTTGCAATCTTCATGGGCCATGATTTGTATTCTCACAGAGCACAAACATTTCAAAACTGCACAAAATTTGCTTGAAAATATTGCACGTAAGGATTTCATATCCTCCTCATCGGTTTTAAATGCTTTGGTGACCAACTGTGACAATCCTGATGTGAATGCACATATTTTGAGCTGGCTTATGATAATATATGTGAATTGTAAGATGCCCCAGGATGCTATTCAGATTCTTGAATATATGAGGCTTCATGGCTTTAAGCCTCATTTGCATGCCTGTACCGTGCTATTAAATTCCTTGGCCAAGGACAGGTTAACTGATATGGTATGGAAGATTTATAAGAAAATGGTTCAAGTTAGAGTTGTTCCTAATATTCATATATACAATGTGCTAATTCATGCTTGTTGCAAGTCTGGGGATGTCGAGAAGGCTGAACAACTATTGTGCGAAATGGAATGGAAGGCTGTTTTCCCTGATCTTTACACGTATAACACATTGATATCTTTGTATTCAAAAAAGAGTCTGCATTATGAAGCTTTGTGTGTTCAAGATAGAATGCAAAGGGGAGGTGTGAGCCCTGACATTGTAACCTATAATTCCCTTATATATGGTTTTTGTAAAGAGGGCAAAATGAGAGAGGCTGTAAAGCTTTTCCGTGAAATTAAGGACGTTTCTCCCAACCATGTTACGTACACCACGTTAATTGATGGATATTGCCGAGTGAATGACCTTGAAGAAGCACTAAGATTATGTAAGGTGATGGAAGCTAGGGGTTTGCACCTGGGAGTTGTGACTTATAATTCAATTCTCCGAAAGTTATGCGAGGAAGGCAGGATAAGGGATGCTAATAAACTCTTGAATGAGATGGGTGAGAGGAAAGTTGAACCTGACAATGTCACTTGTAACACATTAATAAATGCTTACTGCAAAATTGGAGATATGAAGTCTGCATTAAAAGTGAAGAGCAAAATGTTGGACGCTGGCCTGCAGCTCGACAGCTTCACGTACAAGGCACTGATTCATGGATTTTACCGGGTGAGAGATATGGAAAGTGCCAAAAAACTTTTCTTTTGCATGCTCGACTTAGGTTTATGTCCTGGTTATTGTACGTATTCATGGCTAGTTGATGGCTACTGTGAACTAGGAAATGAAGGAGCTATCATAAGTCTACTGGATGAGTTTTCGACAAGAGGTTCTTGTGTGGATTTATCAGTTTGTAGGGCACTAATAAGAAGGCTGTGTCATAGAGAAAGGGTTGGTTTTGCTGAAAAAGTATATAGCGCCATGCAACTTAGGGGTATATCAGGAGACAGTGTGATATACACAAGCCTGGCATATGCTTATTGGAAAGAGGGGAAGTCAAATCTCTCTTCGGAGATGCTATCTGAAATGACTAAAAGAAGTTTATTAATAAACCTCAAGATATATAGATGTTTCAATGCTTCTTATGGATGTGATAACCGTATCTTACATCTCTTTTGGGATCATGTTGCCGAGAGGGGCTTAATGTCGAAGAGCATCACCAAGGAAATACAAAGATGAATTTGCAAACTGTGTTTGATCAAAAACCTCAGCCTTGTTTGCTTGTTAATTATATATGCAATGGTCAATGACAGCAGCATGTATATGAAGAAATCCTTGTACGATAATGGGACGATCATGCGAGCAATTGTCGATATGCTGTATGGTTGTACAATTACAAATGCACGACTCCTGCCTTTGATTTGGATATGTGCATTTTAACTCAGACTGTAAAGACATATCGGCGACAGGATAATGAAACAACACTCCTAGCACAATCGATTATTGAGATATTCTCTAGAAGAGAATTCTATGCTAATGTTGCAAATGAGAGGGACAAGGTTTATTGCTTTTAGCAGTTATGAATCCCACCAGGATGTCGAGAGGGTATTGTGCGATTTCATATGTTGCCTCGTTCAGTTGAGCTTTTCGAGCTTTGCAGTTACATCCTTCCATCTAATAATAAGGGTGTTCGGTTCGGTCTTGGGGGCTGAATCAAGGAGAACGGAAAATCTCGGTTCTTAATTAACATCGTTGAATTGAGTAGCCTACTAACATTCTTCATGCAGGTATTGAATCTGCTGATCCTTGGATTCTTAAAAACACTGGTATAATGGAAGTTTGAAATGGAAATCATGAGAAATCTTAGTTTATTCATTTTTCATGTGCAGAATTTATTCCTCTGGGAAGAGCAAGTTATTTTGGGGTACATTATATTTATTGAGAATCTAGATGGTGTAAAAATTGATGCTTATTAAGCGATTAATTGCCTTCTCTAATCAAGGTATAGCATTTTTTTTATTTTGGTAATTAGGGTATGGTTATTAAAAATTCATTTTCTTAATGTGATTGGACTTTGGTGTGCCTTTTAAAGTGTTAATTTAGAGGATTAAACGTGTTTATATAATAGATATAGTTGATAGAAGGTTCTTTTGAATTTTGTTTTTCTTTACTCTTTTTCTTGTTCAACAACATACCCGAGGATTTGAACTTTTGGTAGATAATAAATATATTAACTAGTTGAACTACCTGTTTTCCCCTTTCACAACTAATATATCTTTTGAAACTTGTTCAAATAGTTTTTTTCTGGGCCTTCTCGACCGAGATCAAGTTAAAAATTTGAGAACTTTTTTAGCACATTTCCGGATTGATAAATAAATCGTTGATTTTATGTTTATGCCTCCAATTATAGCTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATATCACCTTCTCGGAAACTTATCAATTGGCTTGCTCAACAAGTTTTTTTGGGTCTCGAGTTTCTGTTAAGACCCTCGATCCTAACTTCAATCGATCCCACGAACTCACCTCTCACAGAACAGAATTACCACAGCAATTAGAAACAAATCCACAAATGAGGCAAAGTTTTCCTCTATTAATAAACCAACGAACAATAACAAGTAAGAAGAAATTCAAGTTCACGATTCACTAGAAGCAAAATAAATTCACAAAACAAAACCAAGAACCCTTAGAAACCTCGTGGAAGTTTGAGAGAATTGGGAAATCTCTCCATGAGGACTCTTCTTATTTTATGCACACCCCTTTTGGATTTCTGGTTTCCATCTTTAACCTGCAGCTGGTGGTCCACACTCTTCACTGAATTCCTTTCCCACTACCCTTTCTGAAATCGCATTTGCTTTCTCCACTCTTTTCATAACCGAATTTCCATCATCTTTTCCCTTTTTGCCCTTCCTCTTATATGTGTAAATAATCGGGGGCTTTATAGCTTCCTCACTCTCACATTTGGGTTTTCTTTTCCTTTTCAACACATCTCTTTGCACAAACTCACAAAAACAAGGTATATATCTCGTTTTAATCTTTAATAAAACAATTTGGTTTTTAATATGCATGTTGGTGTCCTTCATAAATGTGTTTTGCATGAGTGTTTGCGTAGTCTTGATGCAAAAACATAACGACCTTGAGATAACCTAAATAAAATATATCTTGGATGAGATATTGACATTTTTGACTGAGATACACTTATTTCCCCAAGATTTTGATAATTTTCCTTATTATTATCATTTTTTTATATTTGTTTGTTTTTATTTAGGACGTCTTGCATATTTGTTTGCTTCAATGGTGAACGAAAGAAGATTCAAAAGAATATATAGGGGACCGGTTGACAGGTTTGATTGTTGATATTGGAACAACGGGGAGGACTTTTACACAAAATAGATAGAATAAGTGAGATAAATTATGATAAGTTTGAGTTGGTTATAAGGGG

mRNA sequence

AAAAAAAATCCAAAACCTTGACGCCAAAATTTATTTTTCCCTTTAGGCTCATTATTATTAAACCCCGCCGTAAACCCAACTTTCGTTCATCGGCCTCAGAACTGAGAGTCGATCTTTCACTACTGGAAAAAAGCCTACAACGCAACAACAAAGGGAGAAGTTTAGTATCATCATCTTCAATTTTAGGGTTTGGAAATGGATCATCAAAATGTTTCTTTCCACTTAGAATAGCCTCAAAACGTTTCAAATTTCTGTTCAACACGGTATCATCGTCTGTAGAATTGGAGAAATTCGCAGTTCAGTACCACAATTCGTTTCAGAGTTTTCAAAATACCATAGCCACCTCTGCTCGATAGCTTCCTGCAAGATTCAAATGATAAGGTCTGCTGTTTGATGTTCTCCATTTTTTGAAATCTGTTTGATTAAATTTGTGGATTTGCTGGTATTCTAGGCAATGTTTTTAATCTTTGAATTCTATGTGGATTTTGTGATATTGGAATATTAATTGCCCTATTCAAAGAACCACACAACGTAATTCAAAACCTCAAAACCTCAGAGTTCGAAAAGACTTCTCGTGAGATGAATCTATTTGTCCAAAGTATGTTTGCAGTTGTGGTAAAGGGTCATTGGAATCACCTCTTGAAGCCTAAGATTAGTTCTAGCCTCACATCCATATCCATCCACCAGATTCTTCTCCGGCTATCGTTCTACTGTTCAGGTCCTTCACTTTCTTGGGCGTTTTTCAAGTGGGTTGAGTTAATTCCTGATTACAAGCACTCTTTGCAATCTTCATGGGCCATGATTTGTATTCTCACAGAGCACAAACATTTCAAAACTGCACAAAATTTGCTTGAAAATATTGCACGTAAGGATTTCATATCCTCCTCATCGGTTTTAAATGCTTTGGTGACCAACTGTGACAATCCTGATGTGAATGCACATATTTTGAGCTGGCTTATGATAATATATGTGAATTGTAAGATGCCCCAGGATGCTATTCAGATTCTTGAATATATGAGGCTTCATGGCTTTAAGCCTCATTTGCATGCCTGTACCGTGCTATTAAATTCCTTGGCCAAGGACAGGTTAACTGATATGGTATGGAAGATTTATAAGAAAATGGTTCAAGTTAGAGTTGTTCCTAATATTCATATATACAATGTGCTAATTCATGCTTGTTGCAAGTCTGGGGATGTCGAGAAGGCTGAACAACTATTGTGCGAAATGGAATGGAAGGCTGTTTTCCCTGATCTTTACACGTATAACACATTGATATCTTTGTATTCAAAAAAGAGTCTGCATTATGAAGCTTTGTGTGTTCAAGATAGAATGCAAAGGGGAGGTGTGAGCCCTGACATTGTAACCTATAATTCCCTTATATATGGTTTTTGTAAAGAGGGCAAAATGAGAGAGGCTGTAAAGCTTTTCCGTGAAATTAAGGACGTTTCTCCCAACCATGTTACGTACACCACGTTAATTGATGGATATTGCCGAGTGAATGACCTTGAAGAAGCACTAAGATTATGTAAGGTGATGGAAGCTAGGGGTTTGCACCTGGGAGTTGTGACTTATAATTCAATTCTCCGAAAGTTATGCGAGGAAGGCAGGATAAGGGATGCTAATAAACTCTTGAATGAGATGGGTGAGAGGAAAGTTGAACCTGACAATGTCACTTGTAACACATTAATAAATGCTTACTGCAAAATTGGAGATATGAAGTCTGCATTAAAAGTGAAGAGCAAAATGTTGGACGCTGGCCTGCAGCTCGACAGCTTCACGTACAAGGCACTGATTCATGGATTTTACCGGGTGAGAGATATGGAAAGTGCCAAAAAACTTTTCTTTTGCATGCTCGACTTAGGTTTATGTCCTGGTTATTGTACGTATTCATGGCTAGTTGATGGCTACTGTGAACTAGGAAATGAAGGAGCTATCATAAGTCTACTGGATGAGTTTTCGACAAGAGGTTCTTGTGTGGATTTATCAGTTTGTAGGGCACTAATAAGAAGGCTGTGTCATAGAGAAAGGGTTGGTTTTGCTGAAAAAGTATATAGCGCCATGCAACTTAGGGGTATATCAGGAGACAGTGTGATATACACAAGCCTGGCATATGCTTATTGGAAAGAGGGGAAGTCAAATCTCTCTTCGGAGATGCTATCTGAAATGACTAAAAGAAGTTTATTAATAAACCTCAAGATATATAGATGTTTCAATGCTTCTTATGGATGTGATAACCGTATCTTACATCTCTTTTGGGATCATGTTGCCGAGAGGGGCTTAATGTCGAAGAGCATCACCAAGGAAATACAAAGATGAATTTGCAAACTGTGTTTGATCAAAAACCTCAGCCTTGTTTGCTTGTTAATTATATATGCAATGGTCAATGACAGCAGCATGTATATGAAGAAATCCTTGTACGATAATGGGACGATCATGCGAGCAATTGTCGATATGCTGTATGGTTGTACAATTACAAATGCACGACTCCTGCCTTTGATTTGGATATGTGCATTTTAACTCAGACTGTAAAGACATATCGGCGACAGGATAATGAAACAACACTCCTAGCACAATCGATTATTGAGATATTCTCTAGAAGAGAATTCTATGCTAATGTTGCAAATGAGAGGGACAAGGTTTATTGCTTTTAGCAGTTATGAATCCCACCAGGATGTCGAGAGGGTATTGTGCGATTTCATATGTTGCCTCGTTCAGTTGAGCTTTTCGAGCTTTGCAGTTACATCCTTCCATCTAATAATAAGGGTGTTCGGTTCGGTCTTGGGGGCTGAATCAAGGAGAACGGAAAATCTCGGTTCTTAATTAACATCGTTGAATTGAGTAGCCTACTAACATTCTTCATGCAGGTATTGAATCTGCTGATCCTTGGATTCTTAAAAACACTGGTATAATGGAAGTTTGAAATGGAAATCATGAGAAATCTTAGTTTATTCATTTTTCATGTGCAGAATTTATTCCTCTGGGAAGAGCAAGTTATTTTGGGGTACATTATATTTATTGAGAATCTAGATGGTGTAAAAATTGATGCTTATTAAGCGATTAATTGCCTTCTCTAATCAAGGACGTCTTGCATATTTGTTTGCTTCAATGGTGAACGAAAGAAGATTCAAAAGAATATATAGGGGACCGGTTGACAGGTTTGATTGTTGATATTGGAACAACGGGGAGGACTTTTACACAAAATAGATAGAATAAGTGAGATAAATTATGATAAGTTTGAGTTGGTTATAAGGGG

Coding sequence (CDS)

ATGAATCTATTTGTCCAAAGTATGTTTGCAGTTGTGGTAAAGGGTCATTGGAATCACCTCTTGAAGCCTAAGATTAGTTCTAGCCTCACATCCATATCCATCCACCAGATTCTTCTCCGGCTATCGTTCTACTGTTCAGGTCCTTCACTTTCTTGGGCGTTTTTCAAGTGGGTTGAGTTAATTCCTGATTACAAGCACTCTTTGCAATCTTCATGGGCCATGATTTGTATTCTCACAGAGCACAAACATTTCAAAACTGCACAAAATTTGCTTGAAAATATTGCACGTAAGGATTTCATATCCTCCTCATCGGTTTTAAATGCTTTGGTGACCAACTGTGACAATCCTGATGTGAATGCACATATTTTGAGCTGGCTTATGATAATATATGTGAATTGTAAGATGCCCCAGGATGCTATTCAGATTCTTGAATATATGAGGCTTCATGGCTTTAAGCCTCATTTGCATGCCTGTACCGTGCTATTAAATTCCTTGGCCAAGGACAGGTTAACTGATATGGTATGGAAGATTTATAAGAAAATGGTTCAAGTTAGAGTTGTTCCTAATATTCATATATACAATGTGCTAATTCATGCTTGTTGCAAGTCTGGGGATGTCGAGAAGGCTGAACAACTATTGTGCGAAATGGAATGGAAGGCTGTTTTCCCTGATCTTTACACGTATAACACATTGATATCTTTGTATTCAAAAAAGAGTCTGCATTATGAAGCTTTGTGTGTTCAAGATAGAATGCAAAGGGGAGGTGTGAGCCCTGACATTGTAACCTATAATTCCCTTATATATGGTTTTTGTAAAGAGGGCAAAATGAGAGAGGCTGTAAAGCTTTTCCGTGAAATTAAGGACGTTTCTCCCAACCATGTTACGTACACCACGTTAATTGATGGATATTGCCGAGTGAATGACCTTGAAGAAGCACTAAGATTATGTAAGGTGATGGAAGCTAGGGGTTTGCACCTGGGAGTTGTGACTTATAATTCAATTCTCCGAAAGTTATGCGAGGAAGGCAGGATAAGGGATGCTAATAAACTCTTGAATGAGATGGGTGAGAGGAAAGTTGAACCTGACAATGTCACTTGTAACACATTAATAAATGCTTACTGCAAAATTGGAGATATGAAGTCTGCATTAAAAGTGAAGAGCAAAATGTTGGACGCTGGCCTGCAGCTCGACAGCTTCACGTACAAGGCACTGATTCATGGATTTTACCGGGTGAGAGATATGGAAAGTGCCAAAAAACTTTTCTTTTGCATGCTCGACTTAGGTTTATGTCCTGGTTATTGTACGTATTCATGGCTAGTTGATGGCTACTGTGAACTAGGAAATGAAGGAGCTATCATAAGTCTACTGGATGAGTTTTCGACAAGAGGTTCTTGTGTGGATTTATCAGTTTGTAGGGCACTAATAAGAAGGCTGTGTCATAGAGAAAGGGTTGGTTTTGCTGAAAAAGTATATAGCGCCATGCAACTTAGGGGTATATCAGGAGACAGTGTGATATACACAAGCCTGGCATATGCTTATTGGAAAGAGGGGAAGTCAAATCTCTCTTCGGAGATGCTATCTGAAATGACTAAAAGAAGTTTATTAATAAACCTCAAGATATATAGATGTTTCAATGCTTCTTATGGATGTGATAACCGTATCTTACATCTCTTTTGGGATCATGTTGCCGAGAGGGGCTTAATGTCGAAGAGCATCACCAAGGAAATACAAAGATGA

Protein sequence

MNLFVQSMFAVVVKGHWNHLLKPKISSSLTSISIHQILLRLSFYCSGPSLSWAFFKWVELIPDYKHSLQSSWAMICILTEHKHFKTAQNLLENIARKDFISSSSVLNALVTNCDNPDVNAHILSWLMIIYVNCKMPQDAIQILEYMRLHGFKPHLHACTVLLNSLAKDRLTDMVWKIYKKMVQVRVVPNIHIYNVLIHACCKSGDVEKAEQLLCEMEWKAVFPDLYTYNTLISLYSKKSLHYEALCVQDRMQRGGVSPDIVTYNSLIYGFCKEGKMREAVKLFREIKDVSPNHVTYTTLIDGYCRVNDLEEALRLCKVMEARGLHLGVVTYNSILRKLCEEGRIRDANKLLNEMGERKVEPDNVTCNTLINAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYRVRDMESAKKLFFCMLDLGLCPGYCTYSWLVDGYCELGNEGAIISLLDEFSTRGSCVDLSVCRALIRRLCHRERVGFAEKVYSAMQLRGISGDSVIYTSLAYAYWKEGKSNLSSEMLSEMTKRSLLINLKIYRCFNASYGCDNRILHLFWDHVAERGLMSKSITKEIQR

Homology

[Close]

BLAST of Bhi07G000116 vs. Swiss-Prot
Match: sp|Q9FKR3|PP404_ARATH (Pentatricopeptide repeat-containing protein At5g38730 OS=Arabidopsis thaliana OX=3702 GN=At5g38730 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.2e-42
Identity = 91/178 (51.12%), Postives = 120/178 (67.42%), Query Frame = 0


Query: 3   LFVQSMFAVVVKGHWNHLLKPKISSSLTSISI-HQILLRLSFYC--SGPSLSWAFFKWVE 62
           L  QS+ A V+KG+W ++LK K+ S L   +I  Q++  LS +    GPSLSW+FF W +
Sbjct: 12  LIAQSICATVLKGNWKNILKHKVDSGLLKSAITTQVISELSLFSGYGGPSLSWSFFIWTD 71

Query: 63  LIPDYKHSLQSSWAMICILTEHKHFKTAQNLLENIARKDFISSSSVLNALVTN-CDNPDV 122
            +P  KHSLQSSW MI ILT+HKHFKTA  LL+ +A+++ +SS  VL +LV    ++P+ 
Sbjct: 72  SLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPED 131

Query: 123 NAHILSWLMIIYVNCKMPQDAIQILEYMRLHGFKPHLHACTVLLNSLAKDRLTDMVWK 177
            +H+ SWLMI Y    M  D+I + E +R  G KPHL ACTVLLNSL K RLTD VWK
Sbjct: 132 VSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWK 189

[Close]

BLAST of Bhi07G000116 vs. Swiss-Prot
Match: sp|Q9LVQ5|PP432_ARATH (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 1.8e-06
Identity = 44/161 (27.33%), Postives = 75/161 (46.58%), Query Frame = 0


Query: 28  SLTSISIHQILLRLSFYCSGPSLSWAFFKWVELIP--DYKHSLQSSWAMICILTEHKHFK 87
           SL  +   Q  LRL        L+  F KWV   P  +  H +Q       IL   + + 
Sbjct: 34  SLNHMDYRQARLRLVH----GKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYD 93

Query: 88  TAQNLLENIARKDFISSSSVLNALVTNCDNPDVNAHILSWLMIIYVNCKMPQDAIQILEY 147
            A+++L+ ++      SS V  AL+T     + N  +   L+ +Y+   M QD+++I   
Sbjct: 94  PARHILKELSLMSG-KSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRL 153

Query: 148 MRLHGFKPHLHACTVLLNSLAKDRLTDMVWKIYKKMVQVRV 187
           M L+GF P ++ C  +L S+ K      VW   K+M++ ++
Sbjct: 154 MGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKI 189

[Close]

BLAST of Bhi07G000116 vs. TAIR10
Match: AT5G38730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 176.0 bits (445), Expect = 6.6e-44
Identity = 91/178 (51.12%), Postives = 120/178 (67.42%), Query Frame = 0


Query: 3   LFVQSMFAVVVKGHWNHLLKPKISSSLTSISI-HQILLRLSFYC--SGPSLSWAFFKWVE 62
           L  QS+ A V+KG+W ++LK K+ S L   +I  Q++  LS +    GPSLSW+FF W +
Sbjct: 12  LIAQSICATVLKGNWKNILKHKVDSGLLKSAITTQVISELSLFSGYGGPSLSWSFFIWTD 71

Query: 63  LIPDYKHSLQSSWAMICILTEHKHFKTAQNLLENIARKDFISSSSVLNALVTN-CDNPDV 122
            +P  KHSLQSSW MI ILT+HKHFKTA  LL+ +A+++ +SS  VL +LV    ++P+ 
Sbjct: 72  SLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPED 131

Query: 123 NAHILSWLMIIYVNCKMPQDAIQILEYMRLHGFKPHLHACTVLLNSLAKDRLTDMVWK 177
            +H+ SWLMI Y    M  D+I + E +R  G KPHL ACTVLLNSL K RLTD VWK
Sbjct: 132 VSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWK 189

[Close]

BLAST of Bhi07G000116 vs. TAIR10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 55.8 bits (133), Expect = 1.0e-07
Identity = 44/161 (27.33%), Postives = 75/161 (46.58%), Query Frame = 0


Query: 28  SLTSISIHQILLRLSFYCSGPSLSWAFFKWVELIP--DYKHSLQSSWAMICILTEHKHFK 87
           SL  +   Q  LRL        L+  F KWV   P  +  H +Q       IL   + + 
Sbjct: 74  SLNHMDYRQARLRLVH----GKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYD 133

Query: 88  TAQNLLENIARKDFISSSSVLNALVTNCDNPDVNAHILSWLMIIYVNCKMPQDAIQILEY 147
            A+++L+ ++      SS V  AL+T     + N  +   L+ +Y+   M QD+++I   
Sbjct: 134 PARHILKELSLMSG-KSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRL 193

Query: 148 MRLHGFKPHLHACTVLLNSLAKDRLTDMVWKIYKKMVQVRV 187
           M L+GF P ++ C  +L S+ K      VW   K+M++ ++
Sbjct: 194 MGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKI 229

[Close]

BLAST of Bhi07G000116 vs. TrEMBL
Match: tr|A0A0A0KSX6|A0A0A0KSX6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G289620 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 3.9e-139
Identity = 533/578 (92.21%), Postives = 546/578 (94.46%), Query Frame = 0


Query: 1   MNLFVQSMFAVVVKGHWNHLLKPKISSSLTSISIHQILLRLSFYCSGPSLSWAFFKWVEL 60
           MNL VQSMFAVVVKGHWNHLLKPKISSSLTS SIHQILLRLSFYCSGPSLSWAFFKWVEL
Sbjct: 1   MNLLVQSMFAVVVKGHWNHLLKPKISSSLTSKSIHQILLRLSFYCSGPSLSWAFFKWVEL 60

Query: 61  IPDYKHSLQSSWAMICILTEHKHFKTAQNLLENIARKDFISSSSVLNALVTNCDNPDVNA 120
           IPDYKHSLQSSWAMI ILTEHKHFKTAQ LLE IA KDFISS  VLNALVT+ DNPDVNA
Sbjct: 61  IPDYKHSLQSSWAMIFILTEHKHFKTAQGLLEKIAHKDFISSPLVLNALVTSYDNPDVNA 120

Query: 121 HILSWLMIIYVNCKMPQDAIQILEYMRLHGFKPHLHACTVLLNSLAKDRLTDMVWKIYKK 180
           HILSWLMIIYVNCKMPQDAIQ+LEYMRLHGFKP+LHACTVLLNSLAKDRLTD VWK YKK
Sbjct: 121 HILSWLMIIYVNCKMPQDAIQVLEYMRLHGFKPNLHACTVLLNSLAKDRLTDTVWKSYKK 180

Query: 181 MVQVRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           M+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 MIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKLFREIKXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     VKLFREI XXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKMREAVKLFREIXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXVMEARGLHLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXVMEA+GLHLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXVMEAKGLHLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXGNEGAIISLLDEFSTRGSCVDLSVCRALIRRLCH 480
           XXXXXXXXXXXXXXXXXXXXXXXXXX   GAIISLLDEF T+G CVDLSVCRALIRRLCH
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAIISLLDEFLTKGYCVDLSVCRALIRRLCH 480

Query: 481 RERVGFAEKVYSAMQLRGISGDSVIYTSLAYAYWKEGKSNLSSEMLSEMTKRSLLINLKI 540
           +ERVGFAEK+YS M LRG+SGDSVIYTSLAYAYWK+GKSNL SEMLSEMTKRSLLINLK+
Sbjct: 481 QERVGFAEKIYSTMHLRGVSGDSVIYTSLAYAYWKDGKSNLVSEMLSEMTKRSLLINLKL 540

Query: 541 YRCFNASYGCDNRILHLFWDHVAERGLMSKSITKEIQR 579
           YRCFNASYG  N ILHLFWDHVAERGL+SKSITKEIQ+
Sbjct: 541 YRCFNASYGPHNSILHLFWDHVAERGLLSKSITKEIQK 578

[Close]

BLAST of Bhi07G000116 vs. TrEMBL
Match: tr|A0A1S3CNA4|A0A1S3CNA4_CUCME (pentatricopeptide repeat-containing protein At5g38730 OS=Cucumis melo OX=3656 GN=LOC103502880 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 2.1e-129
Identity = 520/578 (89.97%), Postives = 530/578 (91.70%), Query Frame = 0


Query: 1   MNLFVQSMFAVVVKGHWNHLLKPKISSSLTSISIHQILLRLSFYCSGPSLSWAFFKWVEL 60
           MNL +QSMFAVVVKGHWNHLLKPKISSSLTS SIHQIL RLSFYCSGPSLSWAFFKWVEL
Sbjct: 1   MNLLLQSMFAVVVKGHWNHLLKPKISSSLTSKSIHQILFRLSFYCSGPSLSWAFFKWVEL 60

Query: 61  IPDYKHSLQSSWAMICILTEHKHFKTAQNLLENIARKDFISSSSVLNALVTNCDNPDVNA 120
           IPDYKHSLQSSWAMI ILTEHKHFKTAQ LLE IA KDFISS  VLNALVT+ DNPDVNA
Sbjct: 61  IPDYKHSLQSSWAMIFILTEHKHFKTAQGLLEKIAHKDFISSPLVLNALVTSYDNPDVNA 120

Query: 121 HILSWLMIIYVNCKMPQDAIQILEYMRLHGFKPHLHACTVLLNSLAKDRLTDMVWKIYKK 180
           HILSWLMIIYVNCKMPQDAIQ+ EYMRLHGFKPHLHACTVLLNSLAKDRLTD V      
Sbjct: 121 HILSWLMIIYVNCKMPQDAIQVFEYMRLHGFKPHLHACTVLLNSLAKDRLTDTVXXXXXX 180

Query: 181 MVQVRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKLFREIKXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     VKLFREI XXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKMREAVKLFREIXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXVMEARGLHLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXX VM        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXKVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXGNEGAIISLLDEFSTRGSCVDLSVCRALIRRLCH 480
           XXXXXXXXXXXXXXXXXXXXXXXXXX  EGAIISLLDEF TRG CVDLSVCRALIRRLCH
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXEGAIISLLDEFLTRGYCVDLSVCRALIRRLCH 480

Query: 481 RERVGFAEKVYSAMQLRGISGDSVIYTSLAYAYWKEGKSNLSSEMLSEMTKRSLLINLKI 540
           RERVGFAEK+YSAM LRG+SGDSVIYTSLAYAYWK+GKSNL SEMLSEMTKRSLLINLK+
Sbjct: 481 RERVGFAEKIYSAMHLRGVSGDSVIYTSLAYAYWKDGKSNLVSEMLSEMTKRSLLINLKL 540

Query: 541 YRCFNASYGCDNRILHLFWDHVAERGLMSKSITKEIQR 579
           YRCFNASYG  N ILHLFWDHVAERGL+S+SITKEIQ+
Sbjct: 541 YRCFNASYGPHNSILHLFWDHVAERGLLSRSITKEIQK 578

[Close]

BLAST of Bhi07G000116 vs. TrEMBL
Match: tr|A0A2P5CAE1|A0A2P5CAE1_PARAD (Tetratricopeptide-like helical domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_169500 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 9.1e-64
Identity = 412/577 (71.40%), Postives = 463/577 (80.24%), Query Frame = 0


Query: 4   FVQSMFAVVVKGHWNHLLKPKISSSLTSISIHQILLRLSFYCSGPSLSWAFFKWVELIP- 63
           F+Q + A+V+KG W++L  PK+ SSL+SI+IHQ+LL+LS +  GPS SWAFFKWVE IP 
Sbjct: 16  FIQGVCAIVLKGQWSNLFNPKLGSSLSSITIHQVLLQLSLHGYGPSPSWAFFKWVESIPN 75

Query: 64  -DYKHSLQSSWAMICILTEHKHFKTAQNLLENIARKDFISSSSVLNALVTNCDNPDVNAH 123
            +YKHSLQ SW MI ILT+H+HF+ AQ LLE I+++DF+ S SVL+ALVT  D+PD N+H
Sbjct: 76  SNYKHSLQCSWTMIHILTKHRHFRPAQQLLEKISQRDFLPSPSVLSALVTIHDDPDANSH 135

Query: 124 ILSWLMIIYVNCKMPQDAIQILEYMRLHGFKPHLHACTVLLNSLAKDRLTDMVWKIYKKM 183
           +LSWL+I+YVN KM Q+AIQ+  +MRLH FKPHL ACTVLLNSL KDRLTD+ WK+YKKM
Sbjct: 136 VLSWLVIVYVNLKMIQEAIQVFNHMRLHRFKPHLPACTVLLNSLVKDRLTDLAWKLYKKM 195

Query: 184 VQVRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 243
           V+V V      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 196 VRVGVVPNIHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 255

Query: 244 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKLFREIKXXXXXXXXXXXXXX 303
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +LFRE  XXXXXXXXXXXXXX
Sbjct: 256 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLFREXXXXXXXXXXXXXXXX 315

Query: 304 XXXXXXXXXXXXXXXXVMEARGLHLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 363
           XXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 316 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 375

Query: 364 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 423
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 376 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 435

Query: 424 XXXXXXXXXXXXXXXXXXXXXXXXXGNEGAIISLLDEFSTRGSCVDLSVCRALIRRLCHR 483
           XXXXXXXXXXXXXXXXXXXXXXXXX                                   
Sbjct: 436 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 495

Query: 484 ERVGFAEKVYSAMQLRGISGDSVIYTSLAYAYWKEGKSNLSSEMLSEMTKRSLLINLKIY 543
             +  AEK++S+MQ + +SGD V+YTSLAYA  K GKS++   +L +M KR L+I  KIY
Sbjct: 496 XXLDCAEKIFSSMQGKKVSGDCVVYTSLAYANMKAGKSSVVMVLLDDMYKRRLMITRKIY 555

Query: 544 RCFNASYGCDNRILHLFWDHVAERGLMSKSITKEIQR 579
           R FN SY  DN I+ +FWDH+ ERGLMSK + KE+Q+
Sbjct: 556 RSFNDSYASDNEIIRIFWDHMVERGLMSKGLLKEMQK 592

[Close]

BLAST of Bhi07G000116 vs. TrEMBL
Match: tr|A0A068U435|A0A068U435_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00039744001 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 2.2e-62
Identity = 117/178 (65.73%), Postives = 146/178 (82.02%), Query Frame = 0


Query: 2   NLFVQSMFAVVVKGHWNHLLKPKISSSLTSISIHQILLRLSFYCSGPSLSWAFFKWVELI 61
           +LFV+++ A+VVKGHW+ +LKPKI S ++S +I+Q L+ LS Y  G SLSW+F+KWVE I
Sbjct: 11  SLFVKTVCAIVVKGHWDDILKPKIGSFVSSSTINQALISLSSY--GFSLSWSFYKWVETI 70

Query: 62  PDYKHSLQSSWAMICILTEHKHFKTAQNLLENIARKDFISSSSVLNALVTNCDNPDVNAH 121
           PDY HSLQS W MIC+LT+ KHFKTA  +LE IA KDF+SS +VLNALV+ CD+PDVN+H
Sbjct: 71  PDYNHSLQSCWTMICVLTKQKHFKTAHAMLEKIALKDFLSSPTVLNALVSGCDSPDVNSH 130

Query: 122 ILSWLMIIYVNCKMPQDAIQILEYMRLHGFKPHLHACTVLLNSLAKDRLTDMVWKIYK 180
           +LSWL+I Y N K  QDA+Q+ E+MRL GFKPHLHACTVLLNSL KDRL D VWK+Y+
Sbjct: 131 VLSWLVIFYANSKKTQDAVQVFEHMRLCGFKPHLHACTVLLNSLVKDRLCDTVWKLYR 186

[Close]

BLAST of Bhi07G000116 vs. TrEMBL
Match: tr|A0A2P6PQG6|A0A2P6PQG6_ROSCH (Putative tetratricopeptide-like helical domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0269561 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 4.2e-61
Identity = 114/166 (68.67%), Postives = 138/166 (83.13%), Query Frame = 0


Query: 5   VQSMFAVVVKGHWNHLLKPKISSSLTSISIHQILLRLSFYCSGPSLSWAFFKWVELIPDY 64
           +Q +FA+VVKGHWNHLLKPK+ S LTS +IHQ+LL+LS +   PSLS +FFKWVE +P+Y
Sbjct: 31  IQGLFAIVVKGHWNHLLKPKLGSCLTSSTIHQVLLQLSLFGYSPSLSLSFFKWVESVPNY 90

Query: 65  KHSLQSSWAMICILTEHKHFKTAQNLLENIARKDFISSSSVLNALVTNCDNPDVNAHILS 124
           KHSLQ SW M+ ILT+H HFKTA  LLE IA +DF+SS +VLNAL+   D+PDVN+H+LS
Sbjct: 91  KHSLQCSWTMVHILTKHGHFKTAHQLLEKIAFRDFLSSPTVLNALIPTQDDPDVNSHVLS 150

Query: 125 WLMIIYVNCKMPQDAIQILEYMRLHGFKPHLHACTVLLNSLAKDRL 171
           WL+I Y N KM QDAIQ+LE+MR+HGFKPHLHACTVLLN L KDRL
Sbjct: 151 WLVITYANSKMTQDAIQVLEHMRVHGFKPHLHACTVLLNCLVKDRL 196

[Close]

BLAST of Bhi07G000116 vs. NCBI nr
Match: XP_004140465.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g38730 [Cucumis sativus] >KGN50851.1 hypothetical protein Csa_5G289620 [Cucumis sativus])

HSP 1 Score: 504.2 bits (1297), Expect = 5.8e-139
Identity = 533/578 (92.21%), Postives = 546/578 (94.46%), Query Frame = 0


Query: 1   MNLFVQSMFAVVVKGHWNHLLKPKISSSLTSISIHQILLRLSFYCSGPSLSWAFFKWVEL 60
           MNL VQSMFAVVVKGHWNHLLKPKISSSLTS SIHQILLRLSFYCSGPSLSWAFFKWVEL
Sbjct: 1   MNLLVQSMFAVVVKGHWNHLLKPKISSSLTSKSIHQILLRLSFYCSGPSLSWAFFKWVEL 60

Query: 61  IPDYKHSLQSSWAMICILTEHKHFKTAQNLLENIARKDFISSSSVLNALVTNCDNPDVNA 120
           IPDYKHSLQSSWAMI ILTEHKHFKTAQ LLE IA KDFISS  VLNALVT+ DNPDVNA
Sbjct: 61  IPDYKHSLQSSWAMIFILTEHKHFKTAQGLLEKIAHKDFISSPLVLNALVTSYDNPDVNA 120

Query: 121 HILSWLMIIYVNCKMPQDAIQILEYMRLHGFKPHLHACTVLLNSLAKDRLTDMVWKIYKK 180
           HILSWLMIIYVNCKMPQDAIQ+LEYMRLHGFKP+LHACTVLLNSLAKDRLTD VWK YKK
Sbjct: 121 HILSWLMIIYVNCKMPQDAIQVLEYMRLHGFKPNLHACTVLLNSLAKDRLTDTVWKSYKK 180

Query: 181 MVQVRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           M+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 MIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKLFREIKXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     VKLFREI XXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKMREAVKLFREIXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXVMEARGLHLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXVMEA+GLHLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXVMEAKGLHLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXGNEGAIISLLDEFSTRGSCVDLSVCRALIRRLCH 480
           XXXXXXXXXXXXXXXXXXXXXXXXXX   GAIISLLDEF T+G CVDLSVCRALIRRLCH
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAIISLLDEFLTKGYCVDLSVCRALIRRLCH 480

Query: 481 RERVGFAEKVYSAMQLRGISGDSVIYTSLAYAYWKEGKSNLSSEMLSEMTKRSLLINLKI 540
           +ERVGFAEK+YS M LRG+SGDSVIYTSLAYAYWK+GKSNL SEMLSEMTKRSLLINLK+
Sbjct: 481 QERVGFAEKIYSTMHLRGVSGDSVIYTSLAYAYWKDGKSNLVSEMLSEMTKRSLLINLKL 540

Query: 541 YRCFNASYGCDNRILHLFWDHVAERGLMSKSITKEIQR 579
           YRCFNASYG  N ILHLFWDHVAERGL+SKSITKEIQ+
Sbjct: 541 YRCFNASYGPHNSILHLFWDHVAERGLLSKSITKEIQK 578

[Close]

BLAST of Bhi07G000116 vs. NCBI nr
Match: XP_008465224.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g38730 [Cucumis melo])

HSP 1 Score: 471.9 bits (1213), Expect = 3.2e-129
Identity = 520/578 (89.97%), Postives = 530/578 (91.70%), Query Frame = 0


Query: 1   MNLFVQSMFAVVVKGHWNHLLKPKISSSLTSISIHQILLRLSFYCSGPSLSWAFFKWVEL 60
           MNL +QSMFAVVVKGHWNHLLKPKISSSLTS SIHQIL RLSFYCSGPSLSWAFFKWVEL
Sbjct: 1   MNLLLQSMFAVVVKGHWNHLLKPKISSSLTSKSIHQILFRLSFYCSGPSLSWAFFKWVEL 60

Query: 61  IPDYKHSLQSSWAMICILTEHKHFKTAQNLLENIARKDFISSSSVLNALVTNCDNPDVNA 120
           IPDYKHSLQSSWAMI ILTEHKHFKTAQ LLE IA KDFISS  VLNALVT+ DNPDVNA
Sbjct: 61  IPDYKHSLQSSWAMIFILTEHKHFKTAQGLLEKIAHKDFISSPLVLNALVTSYDNPDVNA 120

Query: 121 HILSWLMIIYVNCKMPQDAIQILEYMRLHGFKPHLHACTVLLNSLAKDRLTDMVWKIYKK 180
           HILSWLMIIYVNCKMPQDAIQ+ EYMRLHGFKPHLHACTVLLNSLAKDRLTD V      
Sbjct: 121 HILSWLMIIYVNCKMPQDAIQVFEYMRLHGFKPHLHACTVLLNSLAKDRLTDTVXXXXXX 180

Query: 181 MVQVRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKLFREIKXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     VKLFREI XXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKMREAVKLFREIXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXVMEARGLHLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXX VM        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXKVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXGNEGAIISLLDEFSTRGSCVDLSVCRALIRRLCH 480
           XXXXXXXXXXXXXXXXXXXXXXXXXX  EGAIISLLDEF TRG CVDLSVCRALIRRLCH
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXEGAIISLLDEFLTRGYCVDLSVCRALIRRLCH 480

Query: 481 RERVGFAEKVYSAMQLRGISGDSVIYTSLAYAYWKEGKSNLSSEMLSEMTKRSLLINLKI 540
           RERVGFAEK+YSAM LRG+SGDSVIYTSLAYAYWK+GKSNL SEMLSEMTKRSLLINLK+
Sbjct: 481 RERVGFAEKIYSAMHLRGVSGDSVIYTSLAYAYWKDGKSNLVSEMLSEMTKRSLLINLKL 540

Query: 541 YRCFNASYGCDNRILHLFWDHVAERGLMSKSITKEIQR 579
           YRCFNASYG  N ILHLFWDHVAERGL+S+SITKEIQ+
Sbjct: 541 YRCFNASYGPHNSILHLFWDHVAERGLLSRSITKEIQK 578

[Close]

BLAST of Bhi07G000116 vs. NCBI nr
Match: XP_022157769.1 (pentatricopeptide repeat-containing protein At5g38730 [Momordica charantia] >XP_022157770.1 pentatricopeptide repeat-containing protein At5g38730 [Momordica charantia] >XP_022157771.1 pentatricopeptide repeat-containing protein At5g38730 [Momordica charantia])

HSP 1 Score: 419.5 bits (1077), Expect = 1.9e-113
Identity = 492/577 (85.27%), Postives = 511/577 (88.56%), Query Frame = 0


Query: 2   NLFVQSMFAVVVKGHWNHLLKPKISSSLTSISIHQILLRLSFYCSGPSLSWAFFKWVELI 61
           NLFVQS+FA+VVKGHW HLLKPKISSSLTSISIHQIL RLSFYCSGPSLSWAFFKWVELI
Sbjct: 12  NLFVQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILFRLSFYCSGPSLSWAFFKWVELI 71

Query: 62  PDYKHSLQSSWAMICILTEHKHFKTAQNLLENIARKDFISSSSVLNALVTNCDNPDVNAH 121
           PDYKHSLQSSW M+CILTEH+HFKTAQNLLENIARKDF+SS SVLN L T CDNPDVNAH
Sbjct: 72  PDYKHSLQSSWTMVCILTEHRHFKTAQNLLENIARKDFMSSPSVLNCLATTCDNPDVNAH 131

Query: 122 ILSWLMIIYVNCKMPQDAIQILEYMRLHGFKPHLHACTVLLNSLAKDRLTDMVWKIYKKM 181
           I SWLMIIYVNCKM QDAIQ+LEYMRLHG +PHLHACTVLLNSLAKDRLTDMVWKI    
Sbjct: 132 IFSWLMIIYVNCKMSQDAIQVLEYMRLHGIRPHLHACTVLLNSLAKDRLTDMVWKIXXXX 191

Query: 182 VQVRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 241
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 192 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 251

Query: 242 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKLFREIKXXXXXXXXXXXXXX 301
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KLFREIK  XXXXXXXXXXXX
Sbjct: 252 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLFREIKDAXXXXXXXXXXXX 311

Query: 302 XXXXXXXXXXXXXXXXVMEARGLHLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 361
           XXXXXXXXXXXXXXXXVMEA+GLHLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 312 XXXXXXXXXXXXXXXXVMEAKGLHLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 371

Query: 362 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 421
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 372 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 431

Query: 422 XXXXXXXXXXXXXXXXXXXXXXXXXGNEGAIISLLDEFSTRGSCVDLSVCRALIRRLCHR 481
           XXXXXXXXXXXXXXXXXXXXXXXXX                                   
Sbjct: 432 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 491

Query: 482 ERVGFAEKVYSAMQLRGISGDSVIYTSLAYAYWKEGKSNLSSEMLSEMTKRSLLINLKIY 541
            +VG+AEK+Y +M+ RGISGDSVIYTSLAYAYWKEGKSNL+  ML EMTKR L++ LKIY
Sbjct: 492 XKVGYAEKIYHSMEHRGISGDSVIYTSLAYAYWKEGKSNLALGMLCEMTKRRLMVTLKIY 551

Query: 542 RCFNASYGCDNRILHLFWDHVAERGLMSKSITKEIQR 579
           RCFNASYGCDNRILHLFWDHVAERGLMS+SIT EI++
Sbjct: 552 RCFNASYGCDNRILHLFWDHVAERGLMSRSITVEIRK 588

[Close]

BLAST of Bhi07G000116 vs. NCBI nr
Match: XP_022957214.1 (pentatricopeptide repeat-containing protein At5g38730 [Cucurbita moschata])

HSP 1 Score: 348.6 bits (893), Expect = 4.1e-92
Identity = 468/577 (81.11%), Postives = 483/577 (83.71%), Query Frame = 0


Query: 2   NLFVQSMFAVVVKGHWNHLLKPKISSSLTSISIHQILLRLSFYCSGPSLSWAFFKWVELI 61
           NLF+QS+FA+VVKGHW HLLKPKISSSLTSISIHQILL+LSFYCSGPSLSWAFFKWVELI
Sbjct: 12  NLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSLSWAFFKWVELI 71

Query: 62  PDYKHSLQSSWAMICILTEHKHFKTAQNLLENIARKDFISSSSVLNALVTNCDNPDVNAH 121
           PDYKHSLQSSW MICILTEHKHF+TAQNL+E IA KDFISS SVLNAL T  DN DVNAH
Sbjct: 72  PDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALATTYDNSDVNAH 131

Query: 122 ILSWLMIIYVNCKMPQDAIQILEYMRLHGFKPHLHACTVLLNSLAKDRLTDMVWKIYKKM 181
           ILSWLMIIYVNCKM QDAIQ+LEYMRLHGFKPHLHACTVLLNSLAKDRLTD+VWKIYK  
Sbjct: 132 ILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRLTDLVWKIYKXX 191

Query: 182 VQVRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 241
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 192 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 251

Query: 242 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKLFREIKXXXXXXXXXXXXXX 301
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKLFREIKXXXXXXXXXXXXXX
Sbjct: 252 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKLFREIKXXXXXXXXXXXXXX 311

Query: 302 XXXXXXXXXXXXXXXXVMEARGLHLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 361
           XXXXXXXXXXXXXXXXVM A      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 312 XXXXXXXXXXXXXXXXVMXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 371

Query: 362 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 421
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 372 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 431

Query: 422 XXXXXXXXXXXXXXXXXXXXXXXXXGNEGAIISLLDEFSTRGSCVDLSVCRALIRRLCHR 481
           XXXXXXXXXXXXXXXXXXXXXXXXX                                   
Sbjct: 432 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 491

Query: 482 ERVGFAEKVYSAMQLRGISGDSVIYTSLAYAYWKEGKSNLSSEMLSEMTKRSLLINLKIY 541
                                        YAYWKEGKSN +SEML EM KR L++ LKIY
Sbjct: 492 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAYWKEGKSNHASEMLHEMAKRRLMVTLKIY 551

Query: 542 RCFNASYGCDNRILHLFWDHVAERGLMSKSITKEIQR 579
           RCFNASYGCDNRIL+LFWDHV+E GL+SKSITKEIQ+
Sbjct: 552 RCFNASYGCDNRILNLFWDHVSEGGLLSKSITKEIQK 588

[Close]

BLAST of Bhi07G000116 vs. NCBI nr
Match: XP_023547207.1 (pentatricopeptide repeat-containing protein At5g38730 [Cucurbita pepo subsp. pepo] >XP_023547281.1 pentatricopeptide repeat-containing protein At5g38730 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 346.3 bits (887), Expect = 2.0e-91
Identity = 467/577 (80.94%), Postives = 482/577 (83.54%), Query Frame = 0


Query: 2   NLFVQSMFAVVVKGHWNHLLKPKISSSLTSISIHQILLRLSFYCSGPSLSWAFFKWVELI 61
           NLF+QS+FA+VVKGHW HLLKPKISSSLTSISIHQILL+LSFYCSGPSLSWAFFKWVELI
Sbjct: 12  NLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSLSWAFFKWVELI 71

Query: 62  PDYKHSLQSSWAMICILTEHKHFKTAQNLLENIARKDFISSSSVLNALVTNCDNPDVNAH 121
           PDYKHSLQSSW MICILTEHKHF+TAQNL+E IA KDFISS SVLNAL T  DN DVNAH
Sbjct: 72  PDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALATTYDNSDVNAH 131

Query: 122 ILSWLMIIYVNCKMPQDAIQILEYMRLHGFKPHLHACTVLLNSLAKDRLTDMVWKIYKKM 181
           ILSWLMIIYVNCKM QDAIQ+LEYMRLHGFKPHLHACTVLLNSLAKDRLTD+VWKIYK  
Sbjct: 132 ILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRLTDLVWKIYKXX 191

Query: 182 VQVRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 241
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 192 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 251

Query: 242 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKLFREIKXXXXXXXXXXXXXX 301
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKLFREIKXXXXXXXXXXXXXX
Sbjct: 252 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKLFREIKXXXXXXXXXXXXXX 311

Query: 302 XXXXXXXXXXXXXXXXVMEARGLHLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 361
           XXXXXXXXXXXXXXXXVM A      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 312 XXXXXXXXXXXXXXXXVMXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 371

Query: 362 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 421
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 372 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 431

Query: 422 XXXXXXXXXXXXXXXXXXXXXXXXXGNEGAIISLLDEFSTRGSCVDLSVCRALIRRLCHR 481
           XXXXXXXXXXXXXXXXXXXXXXXXX                                   
Sbjct: 432 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 491

Query: 482 ERVGFAEKVYSAMQLRGISGDSVIYTSLAYAYWKEGKSNLSSEMLSEMTKRSLLINLKIY 541
                                          YWKEGKSNL+SEML EM KR L++ LKIY
Sbjct: 492 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWKEGKSNLASEMLHEMAKRRLMVTLKIY 551

Query: 542 RCFNASYGCDNRILHLFWDHVAERGLMSKSITKEIQR 579
           RCFNASYGCDNRIL+LFWDHV+E GL+SKSITKEIQ+
Sbjct: 552 RCFNASYGCDNRILNLFWDHVSEGGLLSKSITKEIQK 588

The following BLAST results are available for this feature:

BLAST of Bhi07G000116 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FKR3\|PP404_ARATH	1.2e-42	51.12	Pentatricopeptide repeat-containing protein At5g38730 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9LVQ5\|PP432_ARATH	1.8e-06	27.33	Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX...	[more]

BLAST of Bhi07G000116 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G38730.1	6.6e-44	51.12	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G55840.1	1.0e-07	27.33	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of Bhi07G000116 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KSX6\|A0A0A0KSX6_CUCSA	3.9e-139	92.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G289620 PE=4 SV=1	[more]
tr\|A0A1S3CNA4\|A0A1S3CNA4_CUCME	2.1e-129	89.97	pentatricopeptide repeat-containing protein At5g38730 OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A2P5CAE1\|A0A2P5CAE1_PARAD	9.1e-64	71.40	Tetratricopeptide-like helical domain containing protein OS=Parasponia andersoni...	[more]
tr\|A0A068U435\|A0A068U435_COFCA	2.2e-62	65.73	Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00039744001 PE=4 ...	[more]
tr\|A0A2P6PQG6\|A0A2P6PQG6_ROSCH	4.2e-61	68.67	Putative tetratricopeptide-like helical domain-containing protein OS=Rosa chinen...	[more]

BLAST of Bhi07G000116 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140465.1	5.8e-139	92.21	PREDICTED: pentatricopeptide repeat-containing protein At5g38730 [Cucumis sativu...	[more]
XP_008465224.1	3.2e-129	89.97	PREDICTED: pentatricopeptide repeat-containing protein At5g38730 [Cucumis melo]	[more]
XP_022157769.1	1.9e-113	85.27	pentatricopeptide repeat-containing protein At5g38730 [Momordica charantia] >XP_...	[more]
XP_022957214.1	4.1e-92	81.11	pentatricopeptide repeat-containing protein At5g38730 [Cucurbita moschata]	[more]
XP_023547207.1	2.0e-91	80.94	pentatricopeptide repeat-containing protein At5g38730 [Cucurbita pepo subsp. pep...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0009451	RNA modification
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi07M000116	Bhi07M000116	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 192..217 e-value: 2.4E-8 score: 31.6 coord: 157..189 e-value: 1.4E-4 score: 19.8 coord: 226..260 e-value: 5.1E-6 score: 24.3 coord: 294..325 e-value: 2.2E-8 score: 31.8 coord: 364..397 e-value: 4.2E-8 score: 30.9 coord: 261..288 e-value: 3.9E-8 score: 31.0 coord: 329..362 e-value: 4.9E-8 score: 30.7
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 255..286 e-value: 2.1E-14 score: 52.8 coord: 288..320 e-value: 1.8E-12 score: 46.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 327..375 e-value: 1.2E-16 score: 60.5 coord: 397..444 e-value: 3.8E-8 score: 33.3 coord: 188..233 e-value: 3.1E-14 score: 52.8
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 504..532 e-value: 0.13 score: 12.4 coord: 158..183 e-value: 0.092 score: 12.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 154..188 score: 8.364
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 259..289 score: 11.729
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 467..501 score: 7.958
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 397..431 score: 10.83
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 432..466 score: 6.862
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 502..536 score: 8.21
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 189..223 score: 12.573
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 327..361 score: 11.97
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 224..258 score: 11.115
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 362..396 score: 11.805
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 292..326 score: 12.112
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 119..153 score: 8.638
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 237..356 e-value: 3.8E-37 score: 130.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 357..427 e-value: 1.4E-18 score: 69.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 114..236 e-value: 2.5E-30 score: 107.1 coord: 446..554 e-value: 1.3E-11 score: 46.1
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 2..578
None	No IPR available	PANTHER	PTHR24015:SF279	SUBFAMILY NOT NAMED	coord: 2..578

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi07G000116	Csa5G289620	Cucumber (Chinese Long) v2	cuwgoB505
Bhi07G000116	ClCG11G001180	Watermelon (Charleston Gray)	wcgwgoB175
Bhi07G000116	CSPI05G12500	Wild cucumber (PI 183967)	cpiwgoB509
Bhi07G000116	Cucsa.373310	Cucumber (Gy14) v1	cgywgoB748
Bhi07G000116	CmaCh04G018740	Cucurbita maxima (Rimu)	cmawgoB0904
Bhi07G000116	CmoCh04G019730	Cucurbita moschata (Rifu)	cmowgoB0906
Bhi07G000116	Lsi11G001300	Bottle gourd (USVL1VR-Ls)	lsiwgoB136
Bhi07G000116	Cp4.1LG01g16620	Cucurbita pepo (Zucchini)	cpewgoB0577
Bhi07G000116	CsGy5G010000	Cucumber (Gy14) v2	cgybwgoB491
Bhi07G000116	MELO3C026797.2	Melon (DHL92) v3.6.1	medwgoB076
Bhi07G000116	Carg25931	Silver-seed gourd	carwgoB0436
Bhi07G000116	CsaV3_5G013240	Cucumber (Chinese Long) v3	cucwgoB528
Bhi07G000116	Cla016883	Watermelon (97103) v1	wgowmB566
Bhi07G000116	Cla97C11G207580	Watermelon (97103) v2	wgowmbB523

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi07G000116	Cucurbita maxima (Rimu)	cmawgoB0899
Bhi07G000116	Cucurbita moschata (Rifu)	cmowgoB0898
Bhi07G000116	Cucurbita pepo (Zucchini)	cpewgoB0564
Bhi07G000116	Cucumber (Chinese Long) v3	cucwgoB521
Bhi07G000116	Watermelon (97103) v2	wgowmbB520
Bhi07G000116	Silver-seed gourd	carwgoB0229