Bhi05G000551 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi05G000551
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	polygalacturonase-like
Location	chr5 : 22205940 .. 22206555 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCGTACAAATGTTTTAATAATATTATTATTATTTTTGGATGATAAGCTAATACAATATAGTTTCAATACATATAGCATTGGAAGCTTAGGAAAGAGGTGAACGAAAATGGAGTTGAAAATGTAACATTGATGAATGCAGTCTTCACCAAATCCGATAATGGCGTCAGGATAAAGACATGGCCAACGCCTAGCAATGGTTTCGTAAAAACACGTTCTCTTTCAGAAATATCATTATGAACAATGTTCAAAATCCAATTTTAATTGATCAAAATTATTGTCCCAACAATCAAGGTTGTCCTCTCCAGGTAATTAATTAACTAATTAAATTGTTGTACTACCTAACCCTCTCTTTTAATTTTCGTATAATATTTGTTTTAATTTGTTGTTTTAAAGAGTTCCGGAGTGAAGATTAGTGATGTGACGTATAAAAATATAAAAGGAACATCAGCAACATCGAAAGCTATAACATTTGATTGCAGCTCTAGCAATCCATGCAGTGACATAAGATTGCAAGACATAAAGCTTACATATAAAAACAAGGCAGCAACTTCATCATGCAAGAACGTTGATGGATCGAGTATTGGAGTGCTCATGCCACACACATGCTTCTGA

mRNA sequence

ATGTTCCATTGGAAGCTTAGGAAAGAGGTGAACGAAAATGGAGTTGAAAATGTAACATTGATGAATGCAGTCTTCACCAAATCCGATAATGGCGTCAGGATAAAGACATGGCCAACGCCTAGCAATGGTTTCAGTTCCGGAGTGAAGATTAGTGATGTGACGTATAAAAATATAAAAGGAACATCAGCAACATCGAAAGCTATAACATTTGATTGCAGCTCTAGCAATCCATGCAGTGACATAAGATTGCAAGACATAAAGCTTACATATAAAAACAAGGCAGCAACTTCATCATGCAAGAACGTTGATGGATCGAGTATTGGAGTGCTCATGCCACACACATGCTTCTGA

Coding sequence (CDS)

ATGTTCCATTGGAAGCTTAGGAAAGAGGTGAACGAAAATGGAGTTGAAAATGTAACATTGATGAATGCAGTCTTCACCAAATCCGATAATGGCGTCAGGATAAAGACATGGCCAACGCCTAGCAATGGTTTCAGTTCCGGAGTGAAGATTAGTGATGTGACGTATAAAAATATAAAAGGAACATCAGCAACATCGAAAGCTATAACATTTGATTGCAGCTCTAGCAATCCATGCAGTGACATAAGATTGCAAGACATAAAGCTTACATATAAAAACAAGGCAGCAACTTCATCATGCAAGAACGTTGATGGATCGAGTATTGGAGTGCTCATGCCACACACATGCTTCTGA

Protein sequence

MFHWKLRKEVNENGVENVTLMNAVFTKSDNGVRIKTWPTPSNGFSSGVKISDVTYKNIKGTSATSKAITFDCSSSNPCSDIRLQDIKLTYKNKAATSSCKNVDGSSIGVLMPHTCF

Homology

[Close]

BLAST of Bhi05G000551 vs. Swiss-Prot
Match: sp|P48979|PGLR_PRUPE (Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-25
Identity = 62/144 (43.06%), Postives = 84/144 (58.33%), Query Frame = 0


Query: 6   LRKEVNENGVENVTLMNAVFTKSDNGVRIKTWPTPSNGFS-------------------- 65
           L KE  E GV+NVT+    F+ + NG+RIK+W  PS GF+                    
Sbjct: 249 LGKEQEEAGVQNVTVKTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVID 308

Query: 66  --------------SGVKISDVTYKNIKGTSATSKAITFDCSSSNPCSDIRLQDIKLTYK 116
                         SGV+ISDVTY++I GTSAT  A+ FDCS  +PC +I+L+D+KLTYK
Sbjct: 309 QHYCPDNKGCPGQVSGVQISDVTYEDIHGTSATEVAVKFDCSPKHPCREIKLEDVKLTYK 368

[Close]

BLAST of Bhi05G000551 vs. Swiss-Prot
Match: sp|O22818|PGLR6_ARATH (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g43860 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-14
Identity = 48/138 (34.78%), Postives = 68/138 (49.28%), Query Frame = 0


Query: 6   LRKEVNENGVENVTLMNAVFTKSDNGVRIKTWPTPSNGFS-------------------- 65
           L +   E GV+NVT+ N  F  ++NGVRIKTW   SN F+                    
Sbjct: 255 LGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPIIID 314

Query: 66  -------------SGVKISDVTYKNIKGTSATSKAITFDCSSSNPCSDIRLQDIKLTYKN 111
                        SGVK+S+V Y++I GTS T  A+  DCS   PC+ I + D+ L   +
Sbjct: 315 QHYCLHKPCPKQESGVKVSNVRYEDIHGTSNTEVAVLLDCSKEKPCTGIVMDDVNLVSVH 374

[Close]

BLAST of Bhi05G000551 vs. Swiss-Prot
Match: sp|Q39766|PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 6.8e-14
Identity = 50/145 (34.48%), Postives = 67/145 (46.21%), Query Frame = 0


Query: 6   LRKEVNENGVENVTLMNAVFTKSDNGVRIKTWPTPSNGF--------------------- 65
           L K  NE  VE + + N   T + NG RIKTWP    G                      
Sbjct: 251 LGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILID 310

Query: 66  -------------SSGVKISDVTYKNIKGTSATSKAITFDCSSSNPCSDIRLQDIKLTYK 116
                         S VK+S++++KNI+GTSA  +AI F CS S+PC ++ L DI + + 
Sbjct: 311 QQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIQHN 370

[Close]

BLAST of Bhi05G000551 vs. Swiss-Prot
Match: sp|P24548|PGLR_OENOR (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.2e-13
Identity = 49/141 (34.75%), Postives = 63/141 (44.68%), Query Frame = 0


Query: 11  NENGVENVTLMNAVFTKSDNGVRIKTWPTPSNG--------------------------- 70
           NE  V  + + N   T S NGVRIKTWP    G                           
Sbjct: 214 NEESVVGIYVKNCTITGSQNGVRIKTWPKSEPGEASEMHFQDITMNSVGTPILIDQGYCP 273

Query: 71  -------FSSGVKISDVTYKNIKGTSATSKAITFDCSSSNPCSDIRLQDIKLTYKNKA-- 116
                    S VK+S +++KNIKGTS T +A+   CS S PC+ + L DI LTY  K   
Sbjct: 274 YNQCTAEVPSSVKLSKISFKNIKGTSTTKEAVKLVCSKSFPCNGVELADIDLTYSGKGGP 333

[Close]

BLAST of Bhi05G000551 vs. Swiss-Prot
Match: sp|P49063|PGLR2_ARATH (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 PE=2 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 2.0e-13
Identity = 50/141 (35.46%), Postives = 63/141 (44.68%), Query Frame = 0


Query: 11  NENGVENVTLMNAVFTKSDNGVRIKTWPTPSNGFSSG----------------------- 70
           NE  V+ VT+   +   +DNGVRIKTWP    G +S                        
Sbjct: 296 NEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCP 355

Query: 71  -----------VKISDVTYKNIKGTSATSKAITFDCSSSNPCSDIRLQDIKLTYKNK--A 116
                      VK+SDVT K IKGTSAT  A+   CS   PC++I L DI L +  K   
Sbjct: 356 YGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGP 415

[Close]

BLAST of Bhi05G000551 vs. TAIR10
Match: AT2G43890.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 129.4 bits (324), Expect = 1.4e-30
Identity = 69/144 (47.92%), Postives = 85/144 (59.03%), Query Frame = 0


Query: 6   LRKEVNENGVENVTLMNAVFTKSDNGVRIKTWPTPSNGF--------------------- 65
           L ++ NE GVEN+TL+N+VF+ SDNGVRIKTW   S GF                     
Sbjct: 248 LGRDANEAGVENITLINSVFSGSDNGVRIKTWARQSTGFVRNVLFQNLIMKNVQNPIIVD 307

Query: 66  -------------SSGVKISDVTYKNIKGTSATSKAITFDCSSSNPCSDIRLQDIKLTYK 116
                         SGVKIS V Y+NI+GTS T +A+TFDCS SNPC  IRL DIKLT+ 
Sbjct: 308 QNYCPSNQGCPKQGSGVKISQVVYRNIQGTSRTQQALTFDCSRSNPCQAIRLHDIKLTFN 367

[Close]

BLAST of Bhi05G000551 vs. TAIR10
Match: AT2G43880.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 115.9 bits (289), Expect = 1.6e-26
Identity = 63/139 (45.32%), Postives = 79/139 (56.83%), Query Frame = 0


Query: 11  NENGVENVTLMNAVFTKSDNGVRIKTWPTPSNGF-------------------------- 70
           NE GV+NVT+ ++VFTK+ NGVRIKTW  PS GF                          
Sbjct: 255 NEEGVQNVTVTSSVFTKTQNGVRIKTWARPSRGFVNNVVFRNLIMNNVENPVIIDQNYCP 314

Query: 71  --------SSGVKISDVTYKNIKGTSATSKAITFDCSSSNPCSDIRLQDIKLTYKNKAAT 116
                   SSGVKIS VT+ NIKGTS T  A+  DCS SN C+ +RLQDIKLTY  +++ 
Sbjct: 315 NGKGCPRQSSGVKISGVTFANIKGTSTTPIAMKLDCSGSNHCTGLRLQDIKLTYMRRSSA 374

[Close]

BLAST of Bhi05G000551 vs. TAIR10
Match: AT3G59850.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 111.3 bits (277), Expect = 4.0e-25
Identity = 60/144 (41.67%), Postives = 79/144 (54.86%), Query Frame = 0


Query: 6   LRKEVNENGVENVTLMNAVFTKSDNGVRIKTWPTPSNGFS-------------------- 65
           L KE  E GV+N+T+  A FT ++NGVRIK+W  PSNGF+                    
Sbjct: 244 LGKESVEVGVQNITVKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPIVID 303

Query: 66  --------------SGVKISDVTYKNIKGTSATSKAITFDCSSSNPCSDIRLQDIKLTYK 116
                         SG+KISDV + +I GTSAT   +  DCSS  PC+ IR+QD+KLTY+
Sbjct: 304 QNYCPGNENCPNQVSGIKISDVMFFDIHGTSATEVGVKLDCSSKKPCTGIRIQDVKLTYR 363

[Close]

BLAST of Bhi05G000551 vs. TAIR10
Match: AT1G65570.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 109.4 bits (272), Expect = 1.5e-24
Identity = 61/144 (42.36%), Postives = 76/144 (52.78%), Query Frame = 0


Query: 6   LRKEVNENGVENVTLMNAVFTKSDNGVRIKTWPTPSNGF--------------------- 65
           L K + E GVENVT+ NAVF ++DNG+RIK+WP  SNGF                     
Sbjct: 253 LAKSIEEQGVENVTVKNAVFVRTDNGLRIKSWPRHSNGFVERVRFLGAIMVNVSYPILID 312

Query: 66  -------------SSGVKISDVTYKNIKGTSATSKAITFDCSSSNPCSDIRLQDIKLTYK 116
                         SG+KI+DV Y  I GTSAT  AI  DCS   PC+ IR+Q I LT  
Sbjct: 313 QNYCPGDSSCPSQESGIKINDVIYSGIMGTSATEIAIKMDCSEKVPCTGIRMQAINLTSY 372

[Close]

BLAST of Bhi05G000551 vs. TAIR10
Match: AT2G43870.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 104.8 bits (260), Expect = 3.8e-23
Identity = 57/141 (40.43%), Postives = 76/141 (53.90%), Query Frame = 0


Query: 6   LRKEVNENGVENVTLMNAVFTKSDNGVRIKTWPTPSNGFS-------------------- 65
           L K+  E+GV+NVT+    FT +DNGVRIK+W  PS+GF+                    
Sbjct: 242 LGKDSVESGVQNVTVKTVTFTGTDNGVRIKSWARPSSGFAKNIRFQHCVMNNVENPIIID 301

Query: 66  -------------SGVKISDVTYKNIKGTSATSKAITFDCSSSNPCSDIRLQDIKLTYKN 114
                        SG+KISDV + +I GTSAT   +  DCSS  PC+ IRL+D+KLTY+N
Sbjct: 302 QNYCPDHDCPRQVSGIKISDVLFVDIHGTSATEVGVKLDCSSKKPCTGIRLEDVKLTYQN 361

[Close]

BLAST of Bhi05G000551 vs. TrEMBL
Match: tr|A0A1S3CD98|A0A1S3CD98_CUCME (polygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103499553 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.5e-42
Identity = 95/145 (65.52%), Postives = 105/145 (72.41%), Query Frame = 0


Query: 6   LRKEVNENGVENVTLMNAVFTKSDNGVRIKTWPTPSNGF--------------------- 65
           L KEVNENGVENVTL+NAVFTKSDNGVRIKTWPTPSNGF                     
Sbjct: 246 LGKEVNENGVENVTLVNAVFTKSDNGVRIKTWPTPSNGFVKHVVFENIIMNDVKHPILID 305

Query: 66  -------------SSGVKISDVTYKNIKGTSATSKAITFDCSSSNPCSDIRLQDIKLTYK 117
                         SGVKISDVTYKNI+GTSATS+ ITFDCSS +PCS+IRLQDIKLTYK
Sbjct: 306 QNYCPNNQRCSVQGSGVKISDVTYKNIEGTSATSEGITFDCSSKSPCSNIRLQDIKLTYK 365

[Close]

BLAST of Bhi05G000551 vs. TrEMBL
Match: tr|A0A0A0M0F3|A0A0A0M0F3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G689640 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 4.4e-42
Identity = 93/145 (64.14%), Postives = 105/145 (72.41%), Query Frame = 0


Query: 6   LRKEVNENGVENVTLMNAVFTKSDNGVRIKTWPTPSNGF--------------------- 65
           L KE NENGVENVTL+NAVFTKSDNGVRIKTWPTPSNGF                     
Sbjct: 245 LGKEANENGVENVTLINAVFTKSDNGVRIKTWPTPSNGFVRHVIFQNIVMINVKNPILID 304

Query: 66  -------------SSGVKISDVTYKNIKGTSATSKAITFDCSSSNPCSDIRLQDIKLTYK 117
                        SSGVKI+DVTYK+I+GTSATS+A+TFDCSSSNPCSDI+L+DIKLTYK
Sbjct: 305 QNYCPNHQSCSLQSSGVKINDVTYKSIEGTSATSEAVTFDCSSSNPCSDIKLEDIKLTYK 364

[Close]

BLAST of Bhi05G000551 vs. TrEMBL
Match: tr|A0A2P6RHV9|A0A2P6RHV9_ROSCH (Putative polygalacturonase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0084561 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.3e-33
Identity = 84/144 (58.33%), Postives = 92/144 (63.89%), Query Frame = 0


Query: 6   LRKEVNENGVENVTLMNAVFTKSDNGVRIKTWPTPSNGF--------------------- 65
           L K VNE GV+NVTL NAVFT SDNGVRIK+W  PSN F                     
Sbjct: 249 LGKAVNEAGVQNVTLTNAVFTGSDNGVRIKSWARPSNSFVTNILFQNIMMRNVENPIIID 308

Query: 66  -------------SSGVKISDVTYKNIKGTSATSKAITFDCSSSNPCSDIRLQDIKLTYK 116
                        SSGVKIS VTYKNI+GTSAT++A+TFDCS SNPC  IRLQDIKLTY 
Sbjct: 309 QNYCPNNEGCPNQSSGVKISRVTYKNIQGTSATAEAVTFDCSPSNPCRGIRLQDIKLTYM 368

[Close]

BLAST of Bhi05G000551 vs. TrEMBL
Match: tr|B9HGB5|B9HGB5_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_007G145300v3 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.3e-33
Identity = 81/144 (56.25%), Postives = 95/144 (65.97%), Query Frame = 0


Query: 6   LRKEVNENGVENVTLMNAVFTKSDNGVRIKTWPTPSNGF--------------------- 65
           L KE NE+GVEN+ + N+VF+ SDNGVRIK+W  PSNGF                     
Sbjct: 246 LGKEFNEDGVENIMVTNSVFSGSDNGVRIKSWARPSNGFVRKVVYKNLIMKNVQNPIIID 305

Query: 66  -------------SSGVKISDVTYKNIKGTSATSKAITFDCSSSNPCSDIRLQDIKLTYK 116
                        +SGVKIS V YKNI+GTSAT++A+TFDCS SNPC  IRLQDI+LTYK
Sbjct: 306 QNYCPDNKGCPRQTSGVKISQVIYKNIQGTSATAEAVTFDCSPSNPCRGIRLQDIRLTYK 365

[Close]

BLAST of Bhi05G000551 vs. TrEMBL
Match: tr|B9N8S3|B9N8S3_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G006700v3 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.8e-33
Identity = 79/144 (54.86%), Postives = 94/144 (65.28%), Query Frame = 0


Query: 6   LRKEVNENGVENVTLMNAVFTKSDNGVRIKTWPTPSNGF--------------------- 65
           L K+ NE GVEN+TL N++F+ SDNGVRIK+W  PSNGF                     
Sbjct: 246 LGKDFNEGGVENITLTNSIFSGSDNGVRIKSWARPSNGFVRNVVFQNLIMKNVRNPIIVD 305

Query: 66  -------------SSGVKISDVTYKNIKGTSATSKAITFDCSSSNPCSDIRLQDIKLTYK 116
                        SSGVKIS VTY+NI+GTSA+ +A+TFDCSSSNPC  I+LQDIKLTY 
Sbjct: 306 QNYCPNNQGCPRQSSGVKISQVTYRNIQGTSASPEAVTFDCSSSNPCRGIKLQDIKLTYM 365

[Close]

BLAST of Bhi05G000551 vs. NCBI nr
Match: XP_008460791.1 (PREDICTED: polygalacturonase-like [Cucumis melo])

HSP 1 Score: 181.0 bits (458), Expect = 2.3e-42
Identity = 95/145 (65.52%), Postives = 105/145 (72.41%), Query Frame = 0


Query: 6   LRKEVNENGVENVTLMNAVFTKSDNGVRIKTWPTPSNGF--------------------- 65
           L KEVNENGVENVTL+NAVFTKSDNGVRIKTWPTPSNGF                     
Sbjct: 246 LGKEVNENGVENVTLVNAVFTKSDNGVRIKTWPTPSNGFVKHVVFENIIMNDVKHPILID 305

Query: 66  -------------SSGVKISDVTYKNIKGTSATSKAITFDCSSSNPCSDIRLQDIKLTYK 117
                         SGVKISDVTYKNI+GTSATS+ ITFDCSS +PCS+IRLQDIKLTYK
Sbjct: 306 QNYCPNNQRCSVQGSGVKISDVTYKNIEGTSATSEGITFDCSSKSPCSNIRLQDIKLTYK 365

[Close]

BLAST of Bhi05G000551 vs. NCBI nr
Match: XP_004142576.2 (PREDICTED: polygalacturonase-like [Cucumis sativus] >KGN66774.1 hypothetical protein Csa_1G689640 [Cucumis sativus])

HSP 1 Score: 179.5 bits (454), Expect = 6.6e-42
Identity = 93/145 (64.14%), Postives = 105/145 (72.41%), Query Frame = 0


Query: 6   LRKEVNENGVENVTLMNAVFTKSDNGVRIKTWPTPSNGF--------------------- 65
           L KE NENGVENVTL+NAVFTKSDNGVRIKTWPTPSNGF                     
Sbjct: 245 LGKEANENGVENVTLINAVFTKSDNGVRIKTWPTPSNGFVRHVIFQNIVMINVKNPILID 304

Query: 66  -------------SSGVKISDVTYKNIKGTSATSKAITFDCSSSNPCSDIRLQDIKLTYK 117
                        SSGVKI+DVTYK+I+GTSATS+A+TFDCSSSNPCSDI+L+DIKLTYK
Sbjct: 305 QNYCPNHQSCSLQSSGVKINDVTYKSIEGTSATSEAVTFDCSSSNPCSDIKLEDIKLTYK 364

[Close]

BLAST of Bhi05G000551 vs. NCBI nr
Match: XP_023531182.1 (polygalacturonase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166.4 bits (420), Expect = 5.8e-38
Identity = 88/144 (61.11%), Postives = 99/144 (68.75%), Query Frame = 0


Query: 6   LRKEVNENGVENVTLMNAVFTKSDNGVRIKTWPTPSNGF--------------------- 65
           L KE +E GV+NVTLMNAVFTKSDNGVRIKTW  P NGF                     
Sbjct: 246 LGKEFDEQGVQNVTLMNAVFTKSDNGVRIKTWARPGNGFVKHVVFQNIVMNNVKNPIIID 305

Query: 66  -------------SSGVKISDVTYKNIKGTSATSKAITFDCSSSNPCSDIRLQDIKLTYK 116
                        S+GVKISDVTYKNI GTSATS+AITFDCSS+NPC DIRL+DIKLTYK
Sbjct: 306 QNYCPDNEGCPGQSAGVKISDVTYKNIGGTSATSEAITFDCSSTNPCDDIRLEDIKLTYK 365

[Close]

BLAST of Bhi05G000551 vs. NCBI nr
Match: XP_023531904.1 (polygalacturonase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166.0 bits (419), Expect = 7.6e-38
Identity = 89/144 (61.81%), Postives = 99/144 (68.75%), Query Frame = 0


Query: 6   LRKEVNENGVENVTLMNAVFTKSDNGVRIKTWPTPSNGF--------------------- 65
           L KE +E GV+NVTLMNAVFTKSDNGVRIKTW  P NGF                     
Sbjct: 246 LGKEFDEQGVQNVTLMNAVFTKSDNGVRIKTWARPGNGFVKHVVFQNIVMNNVKNPIIID 305

Query: 66  -------------SSGVKISDVTYKNIKGTSATSKAITFDCSSSNPCSDIRLQDIKLTYK 116
                        S+GVKISDVTYKNI GTSATS+AITFDCSS+NPC DIRL+DIKLTYK
Sbjct: 306 QNYCPDNEGCPGQSAGVKISDVTYKNIGGTSATSEAITFDCSSTNPCDDIRLEDIKLTYK 365

[Close]

BLAST of Bhi05G000551 vs. NCBI nr
Match: XP_022927937.1 (polygalacturonase-like [Cucurbita moschata])

HSP 1 Score: 162.5 bits (410), Expect = 8.4e-37
Identity = 86/144 (59.72%), Postives = 98/144 (68.06%), Query Frame = 0


Query: 6   LRKEVNENGVENVTLMNAVFTKSDNGVRIKTWPTPSNGF--------------------- 65
           L KE +E GV+NVTLMNAVFTKSDNGVRIKTW  P NGF                     
Sbjct: 246 LGKEFDEQGVQNVTLMNAVFTKSDNGVRIKTWARPGNGFVKHVVFQNIVMNNVKNPIIID 305

Query: 66  -------------SSGVKISDVTYKNIKGTSATSKAITFDCSSSNPCSDIRLQDIKLTYK 116
                        S+GVKISDVTYKNI GTSATS+AITFDCSS+NPC D+RL+DIKLTY 
Sbjct: 306 QNYCPDNEGCPGQSAGVKISDVTYKNIGGTSATSEAITFDCSSTNPCDDMRLEDIKLTYN 365

The following BLAST results are available for this feature:

BLAST of Bhi05G000551 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P48979\|PGLR_PRUPE	2.2e-25	43.06	Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1	[more]
sp\|O22818\|PGLR6_ARATH	1.4e-14	34.78	Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g4386...	[more]
sp\|Q39766\|PGLR_GOSBA	6.8e-14	34.48	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
sp\|P24548\|PGLR_OENOR	1.2e-13	34.75	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]
sp\|P49063\|PGLR2_ARATH	2.0e-13	35.46	Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 ...	[more]

BLAST of Bhi05G000551 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G43890.1	1.4e-30	47.92	Pectin lyase-like superfamily protein	[more]
AT2G43880.1	1.6e-26	45.32	Pectin lyase-like superfamily protein	[more]
AT3G59850.1	4.0e-25	41.67	Pectin lyase-like superfamily protein	[more]
AT1G65570.1	1.5e-24	42.36	Pectin lyase-like superfamily protein	[more]
AT2G43870.1	3.8e-23	40.43	Pectin lyase-like superfamily protein	[more]

BLAST of Bhi05G000551 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CD98\|A0A1S3CD98_CUCME	1.5e-42	65.52	polygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103499553 PE=3 SV=1	[more]
tr\|A0A0A0M0F3\|A0A0A0M0F3_CUCSA	4.4e-42	64.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G689640 PE=3 SV=1	[more]
tr\|A0A2P6RHV9\|A0A2P6RHV9_ROSCH	1.3e-33	58.33	Putative polygalacturonase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0084561 P...	[more]
tr\|B9HGB5\|B9HGB5_POPTR	1.3e-33	56.25	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_007G145300v3 PE=...	[more]
tr\|B9N8S3\|B9N8S3_POPTR	4.8e-33	54.86	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G006700v3 PE=...	[more]

BLAST of Bhi05G000551 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460791.1	2.3e-42	65.52	PREDICTED: polygalacturonase-like [Cucumis melo]	[more]
XP_004142576.2	6.6e-42	64.14	PREDICTED: polygalacturonase-like [Cucumis sativus] >KGN66774.1 hypothetical pro...	[more]
XP_023531182.1	5.8e-38	61.11	polygalacturonase-like [Cucurbita pepo subsp. pepo]	[more]
XP_023531904.1	7.6e-38	61.81	polygalacturonase-like [Cucurbita pepo subsp. pepo]	[more]
XP_022927937.1	8.4e-37	59.72	polygalacturonase-like [Cucurbita moschata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004650	polygalacturonase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold
IPR000743	Glyco_hydro_28

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0071555	cell wall organization
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0004650	polygalacturonase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M000551	Bhi05M000551	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 116..116
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 6..45
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 45..116
None	No IPR available	PANTHER	PTHR31375:SF31	F3F20.10 PROTEIN-RELATED	coord: 45..116
None	No IPR available	PANTHER	PTHR31375:SF31	F3F20.10 PROTEIN-RELATED	coord: 6..45
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 41..103 e-value: 3.6E-14 score: 52.4
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 43..106 e-value: 3.5E-15 score: 57.6
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 5..42 e-value: 1.6E-6 score: 29.3
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	SSF51126	Pectin lyase-like	coord: 12..116

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi05G000551	CmaCh19G003190	Cucurbita maxima (Rimu)	cmawgoB0655

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi05G000551	Cucumber (Gy14) v1	cgywgoB377
Bhi05G000551	Cucumber (Gy14) v2	cgybwgoB535
Bhi05G000551	Cucurbita maxima (Rimu)	cmawgoB0116
Bhi05G000551	Cucurbita moschata (Rifu)	cmowgoB0118
Bhi05G000551	Cucurbita pepo (Zucchini)	cpewgoB0853
Bhi05G000551	Wild cucumber (PI 183967)	cpiwgoB565
Bhi05G000551	Cucumber (Chinese Long) v3	cucwgoB578
Bhi05G000551	Cucumber (Chinese Long) v2	cuwgoB560
Bhi05G000551	Bottle gourd (USVL1VR-Ls)	lsiwgoB320
Bhi05G000551	Melon (DHL92) v3.6.1	medwgoB475
Bhi05G000551	Melon (DHL92) v3.5.1	mewgoB473
Bhi05G000551	Watermelon (Charleston Gray)	wcgwgoB036
Bhi05G000551	Watermelon (97103) v2	wgowmbB266