Bhi04G001121 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi04G001121
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	BnaC07g27580D protein
Location	chr4 : 35583197 .. 35585271 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCCCTTCTCATAAAATCCACAACTCCGAAACGCTAATTTTCATATGTGGAAGACATAGTACGATAAGCCATGGACGAGATTAGAGCTTCTTCAACGCCGCCGCAAGACGACGGCGCAGGGACGTTTTCCGGTCGGAAACAAGAAGCGTCGGTGATGGATGGCGTTAAGAAAGGGTGGAGGTTCTTTTGTGCATCTTCTCAAGAGACGCTGCGATATGTCAAAGCCTTTTTCGTTGGTTGGGTTAGTTCTTTTATATTCTTTTGGTTATTTGAACTCTCTGTAGTCTGTACTTGGTTAGTGCCAGTAATTTTAAATATATAATTTTTTTTTATTTAAAGAAGTCTCTGTAATTTTATTAATTCTTAGTTGATTTTTATGGTGAAATAATTATAATAATTTTCATATACAGAAATATAATATATAAATCTGTTTTCAAAATAATAAATAGCAGAAAAAGTAATAAAGACTAAAATTGAATGACTAAAATTCAAAAAAAAAACAAAATCTAATTAAAATGATATTTAAACCTATATAGCTCTATCTCCGTTCACTTATATAAGTCCTCTTCCGAATGATTTTTAATGTAGTGTTTTAATTTTTTTAATTAATTATTTATTTTCACTTAAAAGAATCTCGAAATAATTACAAAAATGAGCCTGAGTGAGAGAAAAGAGAAAGTGAGGAGGAATAAGAGAAGTGATAACGAGAGAGAGAAAAAATGTTTTGGAAAAAGAATCCATACCTTAAAAGGCCTCTTTTGATAAAAAGAATTTAAATTCTGTTTTATGTTTTTGATTGACACACCACACCCTTTCGATTCTGTTTTTGAAAAGTTGTTTTTGATTCTAGGATCTACACGATATAAATTTTAAAAATAATATTTTTATGTTTTAATTGAATCCAAAATTTATAACTTTATCCTAAGACAAAATAATAATTATAAAAAAAAAAATTAAGGTAAAACATTTTCATAAATAAATTAATAATAGTTTATTGTTAATCTAAATTCAATAAGTTTTTTTGTTAAAAAATTATTTAAGTTAGGATCAAAGATAGAAAGGTTTTGCTCTGAGAGAGCCTTTTCAACTTCTTTCTTTTCTCCTTGTATTCAATCAATGCAATAGTAGCTACAATCCTATTTTCTTGTATACACTCGTTGTCCCACGATATGGTTACATAATAATACAAAACAATAAAGAATATATCACTTGGTTTGGTTTGATTGGTGGACAGAAAACAAATTAAAAATAGTGACTCATTTCTATTTTCTTCGTGTCTTTTTCATTTTTATTTTCTTAAATAATAATTTGAATATGCTACCAAACACATATATAAAAACATAAAATACAACCATGTTCTTATTGAATCCTTCGTCTCCAAATTTCTAGATTCTCTGTCAAATAGATCGAGAGTGAAATCCTAATCTAGTGTGTACTTTGTAGTGATTCGGTTGGTTAATTTTACCCCAATAGGACATAAGACATAAGTAAAAGATAAAAAAAAAAAAAAAAAAAATTAAGTTGATGACCCACCTATAAAAGTATGAAAATCTTTTATAATTTATCACGTCAGGGATGATGATACCTATCGTAGTCTAATGCAATTGCATACCTTTGTGAATGATGGGTTATGAATCATATCTGGAAAAAAATAATAATAATGGTTTCTAACTTGCAATTAAGACGTCAATCCAAATAGAGGAAGGAGGTTATAACTTGTAAGAGAGGATGTTTGATTGGGCAGGGAAAGAAGATGACAGCAAAGAGCGAGAAGGAAGCGGCTGAAGCAGACTTAAAGACTGCCAAAATGCAGGTTCAAGCTACCGAGGCCGCAGAGAACACCAAGAGAGGAATATAATTAACAAATCAAAACTAATAATGACAAAAGATCTGAATCCTTTGTGTTTCAGCTTGTAACCATTAGCATATAAATATTTTGGAATGAATAATAATATCCTCTTTTTGGTTTTTGCCTTTCACAACACACGAGACCAAGAAAGATATCCCCAGAGGTTCGTTATTTCTCCTCTGTTTTTCTAAACTATAGTTCAAGCAGTAATCTTTAGAAGTTCGG

mRNA sequence

AATCCCTTCTCATAAAATCCACAACTCCGAAACGCTAATTTTCATATGTGGAAGACATAGTACGATAAGCCATGGACGAGATTAGAGCTTCTTCAACGCCGCCGCAAGACGACGGCGCAGGGACGTTTTCCGGTCGGAAACAAGAAGCGTCGGTGATGGATGGCGTTAAGAAAGGGTGGAGGTTCTTTTGTGCATCTTCTCAAGAGACGCTGCGATATGTCAAAGCCTTTTTCGTTGGTTGGGGAAAGAAGATGACAGCAAAGAGCGAGAAGGAAGCGGCTGAAGCAGACTTAAAGACTGCCAAAATGCAGGTTCAAGCTACCGAGGCCGCAGAGAACACCAAGAGAGGAATATAATTAACAAATCAAAACTAATAATGACAAAAGATCTGAATCCTTTGTGTTTCAGCTTGTAACCATTAGCATATAAATATTTTGGAATGAATAATAATATCCTCTTTTTGGTTTTTGCCTTTCACAACACACGAGACCAAGAAAGATATCCCCAGAGGTTCGTTATTTCTCCTCTGTTTTTCTAAACTATAGTTCAAGCAGTAATCTTTAGAAGTTCGG

Coding sequence (CDS)

ATGGACGAGATTAGAGCTTCTTCAACGCCGCCGCAAGACGACGGCGCAGGGACGTTTTCCGGTCGGAAACAAGAAGCGTCGGTGATGGATGGCGTTAAGAAAGGGTGGAGGTTCTTTTGTGCATCTTCTCAAGAGACGCTGCGATATGTCAAAGCCTTTTTCGTTGGTTGGGGAAAGAAGATGACAGCAAAGAGCGAGAAGGAAGCGGCTGAAGCAGACTTAAAGACTGCCAAAATGCAGGTTCAAGCTACCGAGGCCGCAGAGAACACCAAGAGAGGAATATAA

Protein sequence

MDEIRASSTPPQDDGAGTFSGRKQEASVMDGVKKGWRFFCASSQETLRYVKAFFVGWGKKMTAKSEKEAAEADLKTAKMQVQATEAAENTKRGI

Homology

[Close]

BLAST of Bhi04G001121 vs. TAIR10
Match: AT2G38465.1 (unknown protein)

HSP 1 Score: 62.0 bits (149), Expect = 2.3e-10
Identity = 36/73 (49.32%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 20 SGRKQEASVMDGVKKGWRFFCASSQETLRYVKAFFVGWGKKMTAKSEKEAAEADLKTAKM 79
          + R+   S+ D VK        + QE   YVKAFFVG  K++TAK+EKEA EA L   KM
Sbjct: 6  TSRQPAKSLSDRVKTNCLSMAVTCQEGFSYVKAFFVGQTKRLTAKNEKEATEAHLTETKM 65

Query: 80 QVQATEAAENTKR 93
          QV AT+ AEN K+
Sbjct: 66 QVDATDEAENAKK 78

[Close]

BLAST of Bhi04G001121 vs. TrEMBL
Match: tr|A0A1S3BC67|A0A1S3BC67_CUCME (uncharacterized protein LOC103488109 OS=Cucumis melo OX=3656 GN=LOC103488109 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.8e-31
Identity = 79/94 (84.04%), Postives = 82/94 (87.23%), Query Frame = 0


Query: 1  MDEIR-ASSTPPQDDGAGTFSGRKQEASVMDGVKKGWRFFCASSQETLRYVKAFFVGWGK 60
          MDE R A+STPPQDDGA  FSGRKQEASVMD VKKG   F ASSQETL YVKAFFVGWGK
Sbjct: 1  MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGK 60

Query: 61 KMTAKSEKEAAEADLKTAKMQVQATEAAENTKRG 94
          K+TAKSEKEAAEADL+TAKMQVQATEAAEN K G
Sbjct: 61 KITAKSEKEAAEADLRTAKMQVQATEAAENLKNG 94

[Close]

BLAST of Bhi04G001121 vs. TrEMBL
Match: tr|A0A2P4JN97|A0A2P4JN97_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_62949 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 9.1e-14
Identity = 53/92 (57.61%), Postives = 63/92 (68.48%), Query Frame = 0


Query: 1  MDEIRASSTPPQDDGAGTFSGRKQEASVMDGVKKGWRFFCASSQETLRYVKAFFVGWGKK 60
          M+EIR SS PP    A + + R+QE S M  +KK   +F  S QE   YVKAFF G  KK
Sbjct: 1  MEEIR-SSPPPT---AESTTKREQEMSEMSRLKKDCSWFAVSVQEGFSYVKAFFFGLAKK 60

Query: 61 MTAKSEKEAAEADLKTAKMQVQATEAAENTKR 93
          MTAK E+EA EADLK AKMQV+AT+AAE TK+
Sbjct: 61 MTAKKEREATEADLKAAKMQVEATDAAEETKK 88

[Close]

BLAST of Bhi04G001121 vs. TrEMBL
Match: tr|A0A059BKU3|A0A059BKU3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F00437 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.4e-11
Identity = 49/94 (52.13%), Postives = 58/94 (61.70%), Query Frame = 0


Query: 1   MDEIRASSTPPQDDGAGTFSGRKQEASVMDGVKKGWRFFCASSQETLRYVKAFFVGWGKK 60
           MDEIR    PP DD A T        +V  G KK    F  S QE LRYVKA  +G  KK
Sbjct: 103 MDEIR--ERPPGDDAAAT--------AVGVGAKKECLSFAVSVQEGLRYVKALLLGQAKK 162

Query: 61  MTAKSEKEAAEADLKTAKMQVQATEAAENTKRGI 95
           M A++E+EA EADL+TAKMQV A +AAE+ K+ I
Sbjct: 163 MRARNEREATEADLRTAKMQVDAADAAEDAKKRI 186

[Close]

BLAST of Bhi04G001121 vs. TrEMBL
Match: tr|A0A2P6PG91|A0A2P6PG91_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0233751 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-10
Identity = 46/71 (64.79%), Postives = 53/71 (74.65%), Query Frame = 0


Query: 22 RKQ-EASVMDGVKKGWRFFCASSQETLRYVKAFFVGWGKKMTAKSEKEAAEADLKTAKMQ 81
          RKQ E S M  +K     F  S QE  RYVKAFFVG  KK+TA++EKEAAEADL TAKMQ
Sbjct: 7  RKQAEISGMSRMKTECIAFTVSLQEGYRYVKAFFVGQAKKLTARNEKEAAEADLVTAKMQ 66

Query: 82 VQATEAAENTK 92
          V+AT+AAE+TK
Sbjct: 67 VEATDAAEDTK 77

[Close]

BLAST of Bhi04G001121 vs. TrEMBL
Match: tr|A0A1J6IZ10|A0A1J6IZ10_NICAT (Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_30848 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.7e-10
Identity = 36/59 (61.02%), Postives = 48/59 (81.36%), Query Frame = 0


Query: 34 KGWRFFCASSQETLRYVKAFFVGWGKKMTAKSEKEAAEADLKTAKMQVQATEAAENTKR 93
          KG+ +F  S Q+  RY+KAFFVG GKKMTA+SE+EA +AD+  AKM+V+A +AAENTK+
Sbjct: 17 KGFLYFTTSLQQCCRYIKAFFVGQGKKMTARSEEEATQADMLKAKMEVEAADAAENTKK 75

[Close]

BLAST of Bhi04G001121 vs. NCBI nr
Match: XP_008444894.1 (PREDICTED: uncharacterized protein LOC103488109 [Cucumis melo])

HSP 1 Score: 142.5 bits (358), Expect = 7.3e-31
Identity = 79/94 (84.04%), Postives = 82/94 (87.23%), Query Frame = 0


Query: 1  MDEIR-ASSTPPQDDGAGTFSGRKQEASVMDGVKKGWRFFCASSQETLRYVKAFFVGWGK 60
          MDE R A+STPPQDDGA  FSGRKQEASVMD VKKG   F ASSQETL YVKAFFVGWGK
Sbjct: 1  MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGK 60

Query: 61 KMTAKSEKEAAEADLKTAKMQVQATEAAENTKRG 94
          K+TAKSEKEAAEADL+TAKMQVQATEAAEN K G
Sbjct: 61 KITAKSEKEAAEADLRTAKMQVQATEAAENLKNG 94

[Close]

BLAST of Bhi04G001121 vs. NCBI nr
Match: XP_023001883.1 (uncharacterized protein LOC111495934 [Cucurbita maxima])

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-30
Identity = 77/93 (82.80%), Postives = 81/93 (87.10%), Query Frame = 0


Query: 1  MDEIRASSTPPQDDGAGTFSGRKQEASVMDGVKKGWRFFCASSQETLRYVKAFFVGWGKK 60
          MDEIRAS+ P QDDGAG FSG K+EASVMD VKKG     ASSQE LRYVKAFFVGWGKK
Sbjct: 1  MDEIRASTPPLQDDGAGRFSGWKEEASVMDRVKKGCMAVYASSQEALRYVKAFFVGWGKK 60

Query: 61 MTAKSEKEAAEADLKTAKMQVQATEAAENTKRG 94
          MTAKSEKEAAEADLK AKMQV+ATEAAENTK+G
Sbjct: 61 MTAKSEKEAAEADLKMAKMQVEATEAAENTKKG 93

[Close]

BLAST of Bhi04G001121 vs. NCBI nr
Match: XP_022951050.1 (uncharacterized protein LOC111454014 [Cucurbita moschata])

HSP 1 Score: 123.6 bits (309), Expect = 3.5e-25
Identity = 72/97 (74.23%), Postives = 75/97 (77.32%), Query Frame = 0


Query: 1  MDEIRAS----STPPQDDGAGTFSGRKQEASVMDGVKKGWRFFCASSQETLRYVKAFFVG 60
          MDEIRAS            AG FSG K+EASVMD VKKG R   ASSQE LRYVKAFFVG
Sbjct: 1  MDEIRASXXXXXXXXXXXXAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVG 60

Query: 61 WGKKMTAKSEKEAAEADLKTAKMQVQATEAAENTKRG 94
          WGKKMTAKSEKEAAEADLK AKMQV+ATEAAEN K+G
Sbjct: 61 WGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKG 97

[Close]

BLAST of Bhi04G001121 vs. NCBI nr
Match: XP_023537005.1 (uncharacterized protein LOC111798221 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 120.2 bits (300), Expect = 3.9e-24
Identity = 68/95 (71.58%), Postives = 75/95 (78.95%), Query Frame = 0


Query: 1  MDEIRASS--TPPQDDGAGTFSGRKQEASVMDGVKKGWRFFCASSQETLRYVKAFFVGWG 60
          MDEIRAS+       +GAG FSG K+EASVMD VKKG     ASSQE +RYVKAF VGWG
Sbjct: 1  MDEIRASTXXXXXXXEGAGRFSGSKEEASVMDRVKKGCTAVYASSQEAVRYVKAFLVGWG 60

Query: 61 KKMTAKSEKEAAEADLKTAKMQVQATEAAENTKRG 94
          KKM A+SEKEAAEADLK AKMQV+ATEAAEN K+G
Sbjct: 61 KKMAARSEKEAAEADLKMAKMQVEATEAAENAKKG 95

[Close]

BLAST of Bhi04G001121 vs. NCBI nr
Match: XP_022132044.1 (uncharacterized protein LOC111005010 [Momordica charantia])

HSP 1 Score: 100.9 bits (250), Expect = 2.4e-18
Identity = 53/63 (84.13%), Postives = 57/63 (90.48%), Query Frame = 0


Query: 29 MDGVKKGWRFFCASSQETLRYVKAFFVGWGKKMTAKSEKEAAEADLKTAKMQVQATEAAE 88
          MD +K G   F ASSQETLRYVKAFFVGWGKKMTAK+E+EAA+ADLKTAKMQVQATEAAE
Sbjct: 1  MDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAE 60

Query: 89 NTK 92
          NTK
Sbjct: 61 NTK 63

The following BLAST results are available for this feature:

BLAST of Bhi04G001121 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi04G001121 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G38465.1	2.3e-10	49.32	unknown protein	[more]

BLAST of Bhi04G001121 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BC67\|A0A1S3BC67_CUCME	4.8e-31	84.04	uncharacterized protein LOC103488109 OS=Cucumis melo OX=3656 GN=LOC103488109 PE=...	[more]
tr\|A0A2P4JN97\|A0A2P4JN97_QUESU	9.1e-14	57.61	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_62949 PE=4 SV=1	[more]
tr\|A0A059BKU3\|A0A059BKU3_EUCGR	9.4e-11	52.13	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F00437 PE=4 SV...	[more]
tr\|A0A2P6PG91\|A0A2P6PG91_ROSCH	1.2e-10	64.79	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0233751 PE=4...	[more]
tr\|A0A1J6IZ10\|A0A1J6IZ10_NICAT	4.7e-10	61.02	Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_30848 PE=4 SV=1	[more]

BLAST of Bhi04G001121 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444894.1	7.3e-31	84.04	PREDICTED: uncharacterized protein LOC103488109 [Cucumis melo]	[more]
XP_023001883.1	1.2e-30	82.80	uncharacterized protein LOC111495934 [Cucurbita maxima]	[more]
XP_022951050.1	3.5e-25	74.23	uncharacterized protein LOC111454014 [Cucurbita moschata]	[more]
XP_023537005.1	3.9e-24	71.58	uncharacterized protein LOC111798221 [Cucurbita pepo subsp. pepo]	[more]
XP_022132044.1	2.4e-18	84.13	uncharacterized protein LOC111005010 [Momordica charantia]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M001121	Bhi04M001121	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 60..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi04G001121	MELO3C011071	Melon (DHL92) v3.5.1	mewgoB332
Bhi04G001121	ClCG08G011540	Watermelon (Charleston Gray)	wcgwgoB634
Bhi04G001121	CSPI02G21480	Wild cucumber (PI 183967)	cpiwgoB165
Bhi04G001121	CmaCh12G002110	Cucurbita maxima (Rimu)	cmawgoB0201
Bhi04G001121	CmoCh12G001660	Cucurbita moschata (Rifu)	cmowgoB0197
Bhi04G001121	Lsi08G010100	Bottle gourd (USVL1VR-Ls)	lsiwgoB609
Bhi04G001121	MELO3C011071.2	Melon (DHL92) v3.6.1	medwgoB333
Bhi04G001121	Carg22501	Silver-seed gourd	carwgoB0958
Bhi04G001121	Cla022138	Watermelon (97103) v1	wgowmB317
Bhi04G001121	Cla97C08G154560	Watermelon (97103) v2	wgowmbB335

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi04G001121	Cucurbita pepo (Zucchini)	cpewgoB1034
Bhi04G001121	Cucumber (Chinese Long) v3	cucwgoB175
Bhi04G001121	Cucumber (Chinese Long) v2	cuwgoB168
Bhi04G001121	Silver-seed gourd	carwgoB0070
Bhi04G001121	Cucumber (Gy14) v1	cgywgoB319
Bhi04G001121	Cucumber (Gy14) v2	cgybwgoB163
Bhi04G001121	Cucurbita maxima (Rimu)	cmawgoB0949
Bhi04G001121	Cucurbita moschata (Rifu)	cmowgoB0950
Bhi04G001121	Cucurbita pepo (Zucchini)	cpewgoB0147