Bhi04G000565 (gene) Wax gourd

Overview
NameBhi04G000565
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr4 : 15973228 .. 15973575 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATCATGTCCGAGGATGAGCGCGGTTTGTTTTTGAAAACGAAGCCAATTGCGGCGGAGATGGATCAAGAGGAACAACCAACTACTCCAACCAATAAAGAGTTTAGAATTGGAGTGCCTTTGACCTGCCCTCCACCGCCGAGGAAGTCCAAATCTCTCCCCGGCCCCATCACCATGAGTTGGACTGTCCACGATAATAATGGCGGCAAACACTTCATTCCTTACTCTCAACTCCAGGCCTTCTTTGCCTCCACTTCATCATCATTTGCCGAGCATTCTTCTTTCTACTGCTCTGCTACCCAACACTCATCCCCTAAAATATATATAAATCTCCACAACTACTAG

mRNA sequence

ATGGCGATCATGTCCGAGGATGAGCGCGGTTTGTTTTTGAAAACGAAGCCAATTGCGGCGGAGATGGATCAAGAGGAACAACCAACTACTCCAACCAATAAAGAGTTTAGAATTGGAGTGCCTTTGACCTGCCCTCCACCGCCGAGGAAGTCCAAATCTCTCCCCGGCCCCATCACCATGAGTTGGACTGTCCACGATAATAATGGCGGCAAACACTTCATTCCTTACTCTCAACTCCAGGCCTTCTTTGCCTCCACTTCATCATCATTTGCCGAGCATTCTTCTTTCTACTGCTCTGCTACCCAACACTCATCCCCTAAAATATATATAAATCTCCACAACTACTAG

Coding sequence (CDS)

ATGGCGATCATGTCCGAGGATGAGCGCGGTTTGTTTTTGAAAACGAAGCCAATTGCGGCGGAGATGGATCAAGAGGAACAACCAACTACTCCAACCAATAAAGAGTTTAGAATTGGAGTGCCTTTGACCTGCCCTCCACCGCCGAGGAAGTCCAAATCTCTCCCCGGCCCCATCACCATGAGTTGGACTGTCCACGATAATAATGGCGGCAAACACTTCATTCCTTACTCTCAACTCCAGGCCTTCTTTGCCTCCACTTCATCATCATTTGCCGAGCATTCTTCTTTCTACTGCTCTGCTACCCAACACTCATCCCCTAAAATATATATAAATCTCCACAACTACTAG

Protein sequence

MAIMSEDERGLFLKTKPIAAEMDQEEQPTTPTNKEFRIGVPLTCPPPPRKSKSLPGPITMSWTVHDNNGGKHFIPYSQLQAFFASTSSSFAEHSSFYCSATQHSSPKIYINLHNY
Homology
[Close]
BLAST of Bhi04G000565 vs. TrEMBL
Match: tr|A0A0A0LNC7|A0A0A0LNC7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G349030 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.8e-19
Identity = 64/113 (56.64%), Postives = 79/113 (69.91%), Query Frame = 0 

Query: 3   IMSEDE--RGLFLKTKPIAAEMDQEEQPTTPTNKEFRIGVP---LTCPPPPRKSKSLPGP 62
           ++SEDE  R L +K KP  A++++ EQPTTPT++EFRIG     L CPPPPRK KSLPGP
Sbjct: 2   VISEDERCRCLLMKVKPKVADLEEMEQPTTPTSEEFRIGRVHNYLACPPPPRKPKSLPGP 61

Query: 63  ITMSW-TVH--DNNGGKHFIPYSQLQAFFASTSSSF----AEHSSFYCSATQH 104
           ITMS+ TVH       K+F  YS+LQAFF +++S F      HSSFY SATQH
Sbjct: 62  ITMSFTTVHXXXXXXAKYFTSYSELQAFFFASTSPFPSTQQNHSSFYRSATQH 114

[Close]
BLAST of Bhi04G000565 vs. NCBI nr
Match: KGN62317.1 (hypothetical protein Csa_2G349030 [Cucumis sativus])

HSP 1 Score: 104.4 bits (259), Expect = 2.7e-19
Identity = 64/113 (56.64%), Postives = 79/113 (69.91%), Query Frame = 0 

Query: 3   IMSEDE--RGLFLKTKPIAAEMDQEEQPTTPTNKEFRIGVP---LTCPPPPRKSKSLPGP 62
           ++SEDE  R L +K KP  A++++ EQPTTPT++EFRIG     L CPPPPRK KSLPGP
Sbjct: 2   VISEDERCRCLLMKVKPKVADLEEMEQPTTPTSEEFRIGRVHNYLACPPPPRKPKSLPGP 61

Query: 63  ITMSW-TVH--DNNGGKHFIPYSQLQAFFASTSSSF----AEHSSFYCSATQH 104
           ITMS+ TVH       K+F  YS+LQAFF +++S F      HSSFY SATQH
Sbjct: 62  ITMSFTTVHXXXXXXAKYFTSYSELQAFFFASTSPFPSTQQNHSSFYRSATQH 114

The following BLAST results are available for this feature:
BLAST of Bhi04G000565 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi04G000565 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi04G000565 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LNC7|A0A0A0LNC7_CUCSA1.8e-1956.64Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G349030 PE=4 SV=1[more]
BLAST of Bhi04G000565 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62317.12.7e-1956.64hypothetical protein Csa_2G349030 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M000565Bhi04M000565mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..57

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi04G000565Csa2G349030Cucumber (Chinese Long) v2cuwgoB157
Bhi04G000565MELO3C010687Melon (DHL92) v3.5.1mewgoB345
Bhi04G000565CSPI02G17290Wild cucumber (PI 183967)cpiwgoB155
Bhi04G000565Lsi08G016490Bottle gourd (USVL1VR-Ls)lsiwgoB608
Bhi04G000565MELO3C010687.2Melon (DHL92) v3.6.1medwgoB344
Bhi04G000565CsaV3_2G024890Cucumber (Chinese Long) v3cucwgoB164
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi04G000565Wax gourdwgowgoB085
Bhi04G000565Cucumber (Gy14) v1cgywgoB576
Bhi04G000565Cucumber (Gy14) v1cgywgoB782
Bhi04G000565Cucumber (Gy14) v2cgybwgoB150
Bhi04G000565Cucumber (Gy14) v2cgybwgoB466
Bhi04G000565Cucurbita maxima (Rimu)cmawgoB0196
Bhi04G000565Cucurbita maxima (Rimu)cmawgoB0511
Bhi04G000565Cucurbita maxima (Rimu)cmawgoB0863
Bhi04G000565Cucurbita maxima (Rimu)cmawgoB0938
Bhi04G000565Cucurbita moschata (Rifu)cmowgoB0192
Bhi04G000565Cucurbita moschata (Rifu)cmowgoB0510
Bhi04G000565Cucurbita moschata (Rifu)cmowgoB0861
Bhi04G000565Cucurbita moschata (Rifu)cmowgoB0939
Bhi04G000565Cucurbita pepo (Zucchini)cpewgoB0031
Bhi04G000565Cucurbita pepo (Zucchini)cpewgoB0136
Bhi04G000565Cucurbita pepo (Zucchini)cpewgoB0529
Bhi04G000565Cucurbita pepo (Zucchini)cpewgoB1031
Bhi04G000565Wild cucumber (PI 183967)cpiwgoB493
Bhi04G000565Cucumber (Chinese Long) v3cucwgoB502
Bhi04G000565Cucumber (Chinese Long) v2cuwgoB490
Bhi04G000565Bottle gourd (USVL1VR-Ls)lsiwgoB357
Bhi04G000565Melon (DHL92) v3.6.1medwgoB060
Bhi04G000565Melon (DHL92) v3.5.1mewgoB061
Bhi04G000565Watermelon (Charleston Gray)wcgwgoB453
Bhi04G000565Watermelon (Charleston Gray)wcgwgoB631
Bhi04G000565Watermelon (97103) v2wgowmbB302
Bhi04G000565Watermelon (97103) v2wgowmbB333
Bhi04G000565Watermelon (97103) v1wgowmB316
Bhi04G000565Watermelon (97103) v1wgowmB330
Bhi04G000565Silver-seed gourdcarwgoB0308
Bhi04G000565Silver-seed gourdcarwgoB0611
Bhi04G000565Silver-seed gourdcarwgoB0741
Bhi04G000565Silver-seed gourdcarwgoB0851