Bhi04G000136 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi04G000136
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	F10A5.9
Location	chr4 : 3811815 .. 3812210 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGAATCCAGCCGTTTCGACGAGGCCAAAATCAAACGGAGCAAACAGCTTCGTCATTCACGTGAAGGATGATCAAGAGGATTACAGAGGAGGAAGTCCCGCCGCAAGCATCACTCCGGCGAGGATTCTGAGCCGGATCCGCCGTGTTCTGATGCGATTCATATTCTATTTTCCTTCTCGAGGTTCGTCGTCGGCCTCGGCGTTTATGCCGTCGAAGCAGAGAAATCTGGAGAAATTCGAGCCGCCGAAGACTTCCTGCAGTTCGAATTACTCGTCTTACTCGCATTACAACGAAGCCATTGCTGATTGTATTGAGTTCTTCAACAAGTCGTCGCAGGACCAAATCGACGTCGACGAAGGCAGAATCTCTGATGCAAATGCGATGGTATGA

mRNA sequence

ATGAAGAAGAATCCAGCCGTTTCGACGAGGCCAAAATCAAACGGAGCAAACAGCTTCGTCATTCACGTGAAGGATGATCAAGAGGATTACAGAGGAGGAAGTCCCGCCGCAAGCATCACTCCGGCGAGGATTCTGAGCCGGATCCGCCGTGTTCTGATGCGATTCATATTCTATTTTCCTTCTCGAGGTTCGTCGTCGGCCTCGGCGTTTATGCCGTCGAAGCAGAGAAATCTGGAGAAATTCGAGCCGCCGAAGACTTCCTGCAGTTCGAATTACTCGTCTTACTCGCATTACAACGAAGCCATTGCTGATTGTATTGAGTTCTTCAACAAGTCGTCGCAGGACCAAATCGACGTCGACGAAGGCAGAATCTCTGATGCAAATGCGATGGTATGA

Coding sequence (CDS)

ATGAAGAAGAATCCAGCCGTTTCGACGAGGCCAAAATCAAACGGAGCAAACAGCTTCGTCATTCACGTGAAGGATGATCAAGAGGATTACAGAGGAGGAAGTCCCGCCGCAAGCATCACTCCGGCGAGGATTCTGAGCCGGATCCGCCGTGTTCTGATGCGATTCATATTCTATTTTCCTTCTCGAGGTTCGTCGTCGGCCTCGGCGTTTATGCCGTCGAAGCAGAGAAATCTGGAGAAATTCGAGCCGCCGAAGACTTCCTGCAGTTCGAATTACTCGTCTTACTCGCATTACAACGAAGCCATTGCTGATTGTATTGAGTTCTTCAACAAGTCGTCGCAGGACCAAATCGACGTCGACGAAGGCAGAATCTCTGATGCAAATGCGATGGTATGA

Protein sequence

MKKNPAVSTRPKSNGANSFVIHVKDDQEDYRGGSPAASITPARILSRIRRVLMRFIFYFPSRGSSSASAFMPSKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIDVDEGRISDANAMV

Homology

[Close]

BLAST of Bhi04G000136 vs. TAIR10
Match: AT1G75717.1 (unknown protein)

HSP 1 Score: 66.2 bits (160), Expect = 1.7e-11
Identity = 39/83 (46.99%), Postives = 53/83 (63.86%), Query Frame = 0


Query: 43  RILSRIRRVLMRFIFYFPSRGSSSASAFMPSKQRNLEKFEPPKTSCSSN-YSSYSHYNEA 102
           ++  ++ ++LMR I  F    SS       S+  + E+FEPPK SCSS+ YSS+ HY+EA
Sbjct: 2   KLFHKLGKILMRLI-DFTLHSSSRRQKKNNSRSGDGERFEPPKISCSSSYYSSHVHYSEA 61

Query: 103 IADCIEFFNKSSQDQIDVDEGRI 125
           IADCIEFFNKSS    +  E R+
Sbjct: 62  IADCIEFFNKSSAMSCEDHEARL 83

[Close]

BLAST of Bhi04G000136 vs. TrEMBL
Match: tr|A0A0A0LPF9|A0A0A0LPF9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368240 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.2e-33
Identity = 84/129 (65.12%), Postives = 87/129 (67.44%), Query Frame = 0


Query: 3   KNPAVSTRPKSNGANSFVIHVKDDQEDYRGGSPAASITPARILSRIRRVLMRFIFYFPSR 62
           KNPAVSTRPKSNGANSFV+HVKDDQ+DYRGGSPA  I+PARILSRIRRV MRFIFY PSR
Sbjct: 2   KNPAVSTRPKSNGANSFVVHVKDDQDDYRGGSPAERISPARILSRIRRVFMRFIFYLPSR 61

Query: 63  GSSSASAFMPSKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIDVDEG 122
           G                                    EAIADCIEF NKSSQDQI VDEG
Sbjct: 62  G-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAIADCIEFLNKSSQDQIGVDEG 121

Query: 123 RISDANAMV 132
           RISDANAMV
Sbjct: 122 RISDANAMV 129

[Close]

BLAST of Bhi04G000136 vs. TrEMBL
Match: tr|W9RNU3|W9RNU3_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016044 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.1e-20
Identity = 55/84 (65.48%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 43  RILSRIRRVLMRFIFYFPSRGSSSASAFMPSKQRNLEKFEPPKTSCSSNYSSYSHYNEAI 102
           ++ +R R++LMRFIF  PSR SSSA+  M  + RN ++FEPPKTSCSS YSS+SHYNEAI
Sbjct: 2   KLFNRFRKLLMRFIFSLPSRRSSSATQGMTPRHRNSDRFEPPKTSCSSYYSSHSHYNEAI 61

Query: 103 ADCIEFFNKSSQDQIDVDEGRISD 127
           ADCIEFFNKSSQ +  + EGR SD
Sbjct: 62  ADCIEFFNKSSQ-EAGIFEGRNSD 84

[Close]

BLAST of Bhi04G000136 vs. TrEMBL
Match: tr|A0A2N9E1M3|A0A2N9E1M3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS668 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.1e-20
Identity = 58/112 (51.79%), Postives = 75/112 (66.96%), Query Frame = 0


Query: 18  SFVIHVKDDQ---EDYRGGSPAASITPARILSRIRRVLMRFIFYFPSRGSSSASAFMPSK 77
           SFVI V+  +         SP  + +  ++ +R R++LMR +F  PS GSS+ S    S 
Sbjct: 8   SFVIQVRGCEALLHQANTVSPKLNFSAMKLFNRFRKILMRLLFSLPSSGSSATSGMANSG 67

Query: 78  QRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIDVDEGRISD 127
            +N +KFEPPKTSCSS YSS+SHYNEAIADCIEFFNKSSQ+   + +GR SD
Sbjct: 68  SKNCDKFEPPKTSCSSYYSSHSHYNEAIADCIEFFNKSSQE--GIMDGRKSD 117

[Close]

BLAST of Bhi04G000136 vs. TrEMBL
Match: tr|A0A2P4LQF8|A0A2P4LQF8_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_20197 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.4e-19
Identity = 58/108 (53.70%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 18  SFVIHVKDDQEDYRGGSPAASITPA--------RILSRIRRVLMRFIFYFPSRGSSSASA 77
           SFVI V    E     +P AS T +        ++  R R++LMR +F  PSRGSS++S 
Sbjct: 8   SFVIQVTSSCEALHHQNPQASSTVSPKLNFSAMKLFDRFRKILMRLLFSLPSRGSSASST 67

Query: 78  FMP-SKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQ 117
            M  S  +N +KFEPPKTSCSS YSS+SHYNEAIADCIEFFNKSS  +
Sbjct: 68  GMANSGPKNCDKFEPPKTSCSSYYSSHSHYNEAIADCIEFFNKSSSQE 115

[Close]

BLAST of Bhi04G000136 vs. TrEMBL
Match: tr|V4T5D5|V4T5D5_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10003277mg PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.9e-19
Identity = 50/88 (56.82%), Postives = 70/88 (79.55%), Query Frame = 0


Query: 43  RILSRIRRVLMRFIFYFPSRGSSSASAFMPSKQRNLEKFEPPKTSCSSNYSSYSHYNEAI 102
           ++ +R R++LMR +F FPS G+S++++   SKQ+  +K+EPPKTSCSS YSS+SHY+EAI
Sbjct: 2   KLFNRFRKILMRLLFSFPSHGTSASTSSTASKQKACDKYEPPKTSCSSYYSSHSHYSEAI 61

Query: 103 ADCIEFFNKSSQDQIDVDEGRISDANAM 131
           ADCIEFFNKSSQ+   + +GR SDA  +
Sbjct: 62  ADCIEFFNKSSQE--GILDGRKSDATML 87

[Close]

BLAST of Bhi04G000136 vs. NCBI nr
Match: XP_022996993.1 (uncharacterized protein LOC111492057 [Cucurbita maxima])

HSP 1 Score: 211.5 bits (537), Expect = 1.8e-51
Identity = 109/133 (81.95%), Postives = 118/133 (88.72%), Query Frame = 0


Query: 1   MKKNPAVSTRPKSNGANSFVIHVKDDQEDYRGGSPAASITPARILSRIRRVLMRFIFYFP 60
           M+KNPAVS RPKSNGANSF+I+V+DDQEDYRGGSP  SI+P R LSRIRR+LMRF+FYFP
Sbjct: 1   MEKNPAVSIRPKSNGANSFIINVEDDQEDYRGGSPGVSISPVRFLSRIRRILMRFMFYFP 60

Query: 61  SRGSSS--ASAFMPSKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQID 120
           SRGSSS  +S+ M SKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQI 
Sbjct: 61  SRGSSSSPSSSIMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 120

Query: 121 VDEGRISDANAMV 132
                ISDANAMV
Sbjct: 121 -----ISDANAMV 128

[Close]

BLAST of Bhi04G000136 vs. NCBI nr
Match: XP_022144335.1 (uncharacterized protein LOC111014042 [Momordica charantia])

HSP 1 Score: 180.3 bits (456), Expect = 4.4e-42
Identity = 99/130 (76.15%), Postives = 108/130 (83.08%), Query Frame = 0


Query: 3   KNPAVSTRPKSNGANSFVIHVKDDQEDYRGGSPAASITPARILSRIRRVLMRFIFYFPSR 62
           +NP V    K NGA+ FVIHV+ DQEDYRGGS   S++PARILSRIRR+ MRFIFYFPSR
Sbjct: 5   ENPTVPISHKPNGADGFVIHVR-DQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSR 64

Query: 63  GSSSASAFMPSKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSS-QDQIDVDE 122
           GSSS S  M S+QRNLEKFEPPKTSCSSNYSSYSHY+EAIADCIEFFNKSS Q+QI V  
Sbjct: 65  GSSS-SPIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKSSLQEQIGVG- 124

Query: 123 GRISDANAMV 132
           GR SD NAMV
Sbjct: 125 GRNSDGNAMV 131

[Close]

BLAST of Bhi04G000136 vs. NCBI nr
Match: KGN62672.1 (hypothetical protein Csa_2G368240 [Cucumis sativus])

HSP 1 Score: 149.8 bits (377), Expect = 6.3e-33
Identity = 84/129 (65.12%), Postives = 87/129 (67.44%), Query Frame = 0


Query: 3   KNPAVSTRPKSNGANSFVIHVKDDQEDYRGGSPAASITPARILSRIRRVLMRFIFYFPSR 62
           KNPAVSTRPKSNGANSFV+HVKDDQ+DYRGGSPA  I+PARILSRIRRV MRFIFY PSR
Sbjct: 2   KNPAVSTRPKSNGANSFVVHVKDDQDDYRGGSPAERISPARILSRIRRVFMRFIFYLPSR 61

Query: 63  GSSSASAFMPSKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIDVDEG 122
           G                                    EAIADCIEF NKSSQDQI VDEG
Sbjct: 62  G-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAIADCIEFLNKSSQDQIGVDEG 121

Query: 123 RISDANAMV 132
           RISDANAMV
Sbjct: 122 RISDANAMV 129

[Close]

BLAST of Bhi04G000136 vs. NCBI nr
Match: XP_010104445.2 (uncharacterized protein LOC21399116 [Morus notabilis])

HSP 1 Score: 106.7 bits (265), Expect = 6.1e-20
Identity = 55/84 (65.48%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 43  RILSRIRRVLMRFIFYFPSRGSSSASAFMPSKQRNLEKFEPPKTSCSSNYSSYSHYNEAI 102
           ++ +R R++LMRFIF  PSR SSSA+  M  + RN ++FEPPKTSCSS YSS+SHYNEAI
Sbjct: 2   KLFNRFRKLLMRFIFSLPSRRSSSATQGMTPRHRNSDRFEPPKTSCSSYYSSHSHYNEAI 61

Query: 103 ADCIEFFNKSSQDQIDVDEGRISD 127
           ADCIEFFNKSSQ +  + EGR SD
Sbjct: 62  ADCIEFFNKSSQ-EAGIFEGRNSD 84

[Close]

BLAST of Bhi04G000136 vs. NCBI nr
Match: EXC00978.1 (hypothetical protein L484_016044 [Morus notabilis])

HSP 1 Score: 106.7 bits (265), Expect = 6.1e-20
Identity = 55/84 (65.48%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 43  RILSRIRRVLMRFIFYFPSRGSSSASAFMPSKQRNLEKFEPPKTSCSSNYSSYSHYNEAI 102
           ++ +R R++LMRFIF  PSR SSSA+  M  + RN ++FEPPKTSCSS YSS+SHYNEAI
Sbjct: 2   KLFNRFRKLLMRFIFSLPSRRSSSATQGMTPRHRNSDRFEPPKTSCSSYYSSHSHYNEAI 61

Query: 103 ADCIEFFNKSSQDQIDVDEGRISD 127
           ADCIEFFNKSSQ +  + EGR SD
Sbjct: 62  ADCIEFFNKSSQ-EAGIFEGRNSD 84

The following BLAST results are available for this feature:

BLAST of Bhi04G000136 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi04G000136 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G75717.1	1.7e-11	46.99	unknown protein	[more]

BLAST of Bhi04G000136 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LPF9\|A0A0A0LPF9_CUCSA	4.2e-33	65.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368240 PE=4 SV=1	[more]
tr\|W9RNU3\|W9RNU3_9ROSA	4.1e-20	65.48	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016044 PE=4 SV=1	[more]
tr\|A0A2N9E1M3\|A0A2N9E1M3_FAGSY	4.1e-20	51.79	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS668 PE=4 SV=1	[more]
tr\|A0A2P4LQF8\|A0A2P4LQF8_QUESU	3.4e-19	53.70	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_20197 PE=4 SV=1	[more]
tr\|V4T5D5\|V4T5D5_9ROSI	5.9e-19	56.82	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10003277mg PE=4 ...	[more]

BLAST of Bhi04G000136 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022996993.1	1.8e-51	81.95	uncharacterized protein LOC111492057 [Cucurbita maxima]	[more]
XP_022144335.1	4.4e-42	76.15	uncharacterized protein LOC111014042 [Momordica charantia]	[more]
KGN62672.1	6.3e-33	65.12	hypothetical protein Csa_2G368240 [Cucumis sativus]	[more]
XP_010104445.2	6.1e-20	65.48	uncharacterized protein LOC21399116 [Morus notabilis]	[more]
EXC00978.1	6.1e-20	65.48	hypothetical protein L484_016044 [Morus notabilis]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M000136	Bhi04M000136	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35111	FAMILY NOT NAMED	coord: 44..125
None	No IPR available	PANTHER	PTHR35111:SF2	F10A5.9	coord: 44..125

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi04G000136	Csa2G368240	Cucumber (Chinese Long) v2	cuwgoB167
Bhi04G000136	MELO3C011006	Melon (DHL92) v3.5.1	mewgoB330
Bhi04G000136	ClCG08G014360	Watermelon (Charleston Gray)	wcgwgoB613
Bhi04G000136	CSPI02G20800	Wild cucumber (PI 183967)	cpiwgoB164
Bhi04G000136	CmaCh05G003020	Cucurbita maxima (Rimu)	cmawgoB0945
Bhi04G000136	CmoCh05G003050	Cucurbita moschata (Rifu)	cmowgoB0945
Bhi04G000136	Lsi04G017400	Bottle gourd (USVL1VR-Ls)	lsiwgoB368
Bhi04G000136	Lsi08G013270	Bottle gourd (USVL1VR-Ls)	lsiwgoB592
Bhi04G000136	Cp4.1LG11g02410	Cucurbita pepo (Zucchini)	cpewgoB0142
Bhi04G000136	MELO3C011006.2	Melon (DHL92) v3.6.1	medwgoB331
Bhi04G000136	Carg09409	Silver-seed gourd	carwgoB0173
Bhi04G000136	CsaV3_2G029470	Cucumber (Chinese Long) v3	cucwgoB174
Bhi04G000136	Cla022429	Watermelon (97103) v1	wgowmB298

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi04G000136	Wax gourd	wgowgoB094
Bhi04G000136	Cucumber (Gy14) v1	cgywgoB318
Bhi04G000136	Cucumber (Gy14) v1	cgywgoB685
Bhi04G000136	Cucumber (Gy14) v2	cgybwgoB162
Bhi04G000136	Cucumber (Gy14) v2	cgybwgoB307
Bhi04G000136	Cucurbita maxima (Rimu)	cmawgoB0195
Bhi04G000136	Cucurbita maxima (Rimu)	cmawgoB0578
Bhi04G000136	Cucurbita moschata (Rifu)	cmowgoB0572
Bhi04G000136	Cucurbita moschata (Rifu)	cmowgoB0191
Bhi04G000136	Cucurbita pepo (Zucchini)	cpewgoB0686
Bhi04G000136	Cucurbita pepo (Zucchini)	cpewgoB1029
Bhi04G000136	Wild cucumber (PI 183967)	cpiwgoB320
Bhi04G000136	Cucumber (Chinese Long) v3	cucwgoB325
Bhi04G000136	Cucumber (Chinese Long) v2	cuwgoB319
Bhi04G000136	Melon (DHL92) v3.6.1	medwgoB411
Bhi04G000136	Melon (DHL92) v3.5.1	mewgoB410
Bhi04G000136	Watermelon (Charleston Gray)	wcgwgoB456
Bhi04G000136	Watermelon (97103) v2	wgowmbB305
Bhi04G000136	Watermelon (97103) v2	wgowmbB314
Bhi04G000136	Watermelon (97103) v1	wgowmB334
Bhi04G000136	Silver-seed gourd	carwgoB1092
Bhi04G000136	Silver-seed gourd	carwgoB1142