Bhi03G001239 (gene) Wax gourd

NameBhi03G001239
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionHistone H2A
Locationchr3 : 33894195 .. 33896522 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGTCATTCACTTTCCATTTTATTTCTCATTTCATAAAAAAAAAAAATTTAAAATTTAAAATTTAAAAAAAAAATGTCATTTCCGTTGAAAACCCGTCGTTAACCTCCTTCACATTTTCACCTTTTTCATTTTTCTGTTTTTTTTCCCGAGAAAAATTTCCCTTCCAATGGACACCGGCGACAAGGCTAAGAAAGGCGTCGCCGGCAGAAAAGGCGGCGGCGGACCGAAGAAAAAGCCTGTCTCTCGCTCCGTCAAAGCTGGCCTCCAGTTTCCCGTCGGCAGAATCGACCGCTACTTGAAGGAGGGCCGTTACTCTCGACGAGTGGGAACCGGCGCTCCGGTTTACCTTGCTGCTGTTCTTGAGTACCTCGCTGCAGAGGTGAATATTATACTACTTTGTTCTTCTCAGTTTTACACTTTTTGAATGTTTGTGTGTGCGAAATCAGAGCCTCTTTTTGATGGATTCAATGCTTGGATTTAAGTGCATTTTCTTTATTTCTTGTCAATGGCTTTGAATTTGATTTTCTTAGCTCTTTCTTTTCGGAGATAAAAATCCCCAATCTGATGGATTTAGGTGTTTTTTTAAATTCTATCTATTCTCTCTATGTGGTTTTGTATATATAAACAAGTCCATTCTAAGTTCTCGTACAATCTAGAAAGAAAGAAAAAAAATCACCTACAGTTTTTGTTTTTTTTTAAAAAAAAAAAAAATGGAATTTAAGGTCTGTTTGGTATCAATTTCACTTTCACTTTCTTGTTTTTGAAATTTATGATTGTTTGGTCCACTTTTCCTATTATTGTTATCACGCTTTTGTAAAGGTACACTTAAATCTCTGGTCAAATTCTTAAAACAAATACAAATTTTGGCTTTGATTTTTGAAAACGATTATTGGAACGTAGATAATAACACAACATAGGAACTTTGATGGGTGAAAGTAGTGTATCTGAATTTAATTTCTTTTAGGTTTTTAGAAAAGAAAAAATTGAGTTGTTTTCGAATGAGATCTAAATTATTTTCTAATGTTACTGTTTATGATTTGGAAAATGATTTTGAATGAAAGTACTTTCAGAAAATGCATGGAAACTAAAAATAAAAATTTCATCAAACGCTAGTGATCAAAATACAGAAATTTGTAAACAAATAATTGGATGAAAAATAGAATTTTTCAAAAACAAATTCATTTTTTTTTTCAAATATTTAATATGAAAAATTAGAAATTCAATCTGGATAGATTCCCAACTGCCCCCGTTATCCGCTTTGCTTGCTTTTAATTTTTATAACTTACACAGGAGTTTGATAATAATACTGGAAGTGGTACACTTTTTTTTGTTTTGGGTGCAGTGGTGATTTAATATAATATTATTTTATTTTCAATTAATATTGATAATTATTTGTCAATTATTAATACTAATTGATTTCTTTTTTAGTACAATTGGAGGAGAGGGGATTTGTTTGCAAATTTTCGAACAAGGAATTATTAAGAATTCCTTTAAGCATATACTATCACCTATCAGTTTAAATACTGAATTATGCTTTAGGTTTTGGAACTGGCTGGGAATGCAGCAAGAGACAACAAGAAGAACAGGATCATCCCGAGACACGTCCTTTTGGCTGTGAGGAACGACGAGGAACTTGGGAAGCTTCTTGCCGGGGTGACGATCGCTCATGGTGGGGTGCTTCCGAACATCAACCCGGTCCTTCTTCGAAAGAAATCCGAGAGGGCGGTGGCAGCAGCAAAGGAGCCCAAGTCTTCTTCCAAGAGCACCAGGTCCCCCAAGAAGGCCTAGCTTTGCTTCTCATATGCCCCCACCCACTTATTTCTGTATTTAGATTGGACTTATCTTCATGTTTAGGACCACTTTATCTGTTTGTGCCTTTATATTGTAGGACATTCCTTTGTGTTCACAACTCAGTTGAAATAATGTAAGATTTAACCTTTCTTATGAATCTTTGTATCTTCCTCCACTAATGGGTTGATGTATTTGGGACATGGCCTTCAATGTATGGATTGAATGATTGGATCATGGGATGGATAAAATTAGACCACCATGCTATGTGATTTGCTCTTGAATATTTCTAGATGTCTAATGGTTTGAAATATGGAGATAATTAGAACTAAAATTGGAACTCTCATCAATCGGATGTTGGTAAAAATTCGAGTCAATTTAACCTTTGCGAGTCAACATGAGCATAATTTAATTGATTAATAGGTGAAGGATTCAGATTTTTCCGTCAATTTGTAATTGAAATGTTAATGAAAACATTTTTGGTCCATGGGAGAGAAGTTTGGAAGGAGATATTTGATGGTGAGAAAATTAAATATCTT

mRNA sequence

GTGTCATTCACTTTCCATTTTATTTCTCATTTCATAAAAAAAAAAAATTTAAAATTTAAAATTTAAAAAAAAAATGTCATTTCCGTTGAAAACCCGTCGTTAACCTCCTTCACATTTTCACCTTTTTCATTTTTCTGTTTTTTTTCCCGAGAAAAATTTCCCTTCCAATGGACACCGGCGACAAGGCTAAGAAAGGCGTCGCCGGCAGAAAAGGCGGCGGCGGACCGAAGAAAAAGCCTGTCTCTCGCTCCGTCAAAGCTGGCCTCCAGTTTCCCGTCGGCAGAATCGACCGCTACTTGAAGGAGGGCCGTTACTCTCGACGAGTGGGAACCGGCGCTCCGGTTTACCTTGCTGCTGTTCTTGAGTACCTCGCTGCAGAGGTTTTGGAACTGGCTGGGAATGCAGCAAGAGACAACAAGAAGAACAGGATCATCCCGAGACACGTCCTTTTGGCTGTGAGGAACGACGAGGAACTTGGGAAGCTTCTTGCCGGGGTGACGATCGCTCATGGTGGGGTGCTTCCGAACATCAACCCGGTCCTTCTTCGAAAGAAATCCGAGAGGGCGGTGGCAGCAGCAAAGGAGCCCAAGTCTTCTTCCAAGAGCACCAGGTCCCCCAAGAAGGCCTAGCTTTGCTTCTCATATGCCCCCACCCACTTATTTCTGTATTTAGATTGGACTTATCTTCATGTTTAGGACCACTTTATCTGTTTGTGCCTTTATATTGTAGGACATTCCTTTGTGTTCACAACTCAGTTGAAATAATGTAAGATTTAACCTTTCTTATGAATCTTTGTATCTTCCTCCACTAATGGGTTGATGTATTTGGGACATGGCCTTCAATGTATGGATTGAATGATTGGATCATGGGATGGATAAAATTAGACCACCATGCTATGTGATTTGCTCTTGAATATTTCTAGATGTCTAATGGTTTGAAATATGGAGATAATTAGAACTAAAATTGGAACTCTCATCAATCGGATGTTGGTAAAAATTCGAGTCAATTTAACCTTTGCGAGTCAACATGAGCATAATTTAATTGATTAATAGGTGAAGGATTCAGATTTTTCCGTCAATTTGTAATTGAAATGTTAATGAAAACATTTTTGGTCCATGGGAGAGAAGTTTGGAAGGAGATATTTGATGGTGAGAAAATTAAATATCTT

Coding sequence (CDS)

ATGGACACCGGCGACAAGGCTAAGAAAGGCGTCGCCGGCAGAAAAGGCGGCGGCGGACCGAAGAAAAAGCCTGTCTCTCGCTCCGTCAAAGCTGGCCTCCAGTTTCCCGTCGGCAGAATCGACCGCTACTTGAAGGAGGGCCGTTACTCTCGACGAGTGGGAACCGGCGCTCCGGTTTACCTTGCTGCTGTTCTTGAGTACCTCGCTGCAGAGGTTTTGGAACTGGCTGGGAATGCAGCAAGAGACAACAAGAAGAACAGGATCATCCCGAGACACGTCCTTTTGGCTGTGAGGAACGACGAGGAACTTGGGAAGCTTCTTGCCGGGGTGACGATCGCTCATGGTGGGGTGCTTCCGAACATCAACCCGGTCCTTCTTCGAAAGAAATCCGAGAGGGCGGTGGCAGCAGCAAAGGAGCCCAAGTCTTCTTCCAAGAGCACCAGGTCCCCCAAGAAGGCCTAG

Protein sequence

MDTGDKAKKGVAGRKGGGGPKKKPVSRSVKAGLQFPVGRIDRYLKEGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLRKKSERAVAAAKEPKSSSKSTRSPKKA
BLAST of Bhi03G001239 vs. Swiss-Prot
Match: sp|Q9LZ46|H2A4_ARATH (Probable histone H2A.4 OS=Arabidopsis thaliana OX=3702 GN=At5g02560 PE=1 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.3e-60
Identity = 119/138 (86.23%), Postives = 127/138 (92.03%), Query Frame = 0

Query: 1   MDTGDKAKKGVAGRKGGGGPKKKPVSRSVKAGLQFPVGRIDRYLKEGRYSRRVGTGAPVY 60
           MD+G K KKG AGR+ GGGPKKKPVSRSVK+GLQFPVGRI RYLK+GRYS+RVGTGAPVY
Sbjct: 1   MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELG LL GVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPN 120

Query: 121 INPVLLRKKSERAVAAAK 139
           INP+LL KKSE+A +  K
Sbjct: 121 INPILLPKKSEKAASTTK 138

BLAST of Bhi03G001239 vs. Swiss-Prot
Match: sp|Q2HU65|H2A2_MEDTR (Probable histone H2A.2 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 6.3e-60
Identity = 125/154 (81.17%), Postives = 137/154 (88.96%), Query Frame = 0

Query: 1   MDTGDKAKKGVAGRKGGGGPKKKPVSRSVKAGLQFPVGRIDRYLKEGRYSRRVGTGAPVY 60
           MD   K KKG  GRK GGGP+KK V+RS++AGLQFPVGRI RYLK+GRY++RVGTGAPVY
Sbjct: 1   MDASTKTKKGAGGRK-GGGPRKKSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120

Query: 121 INPVLLRKKSERAVAAAKEPKS-SSKSTRSPKKA 154
           INPVLL KK+ER+   +KEPKS   K+ +SPKKA
Sbjct: 121 INPVLLPKKTERSNTVSKEPKSPKPKAGKSPKKA 153

BLAST of Bhi03G001239 vs. Swiss-Prot
Match: sp|Q9M531|H2A_EUPES (Histone H2A OS=Euphorbia esula OX=3993 PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.4e-59
Identity = 121/137 (88.32%), Postives = 129/137 (94.16%), Query Frame = 0

Query: 1   MDTGDKAKKGVAGRKGGGGPKKKPVSRSVKAGLQFPVGRIDRYLKEGRYSRRVGTGAPVY 60
           MDTG K KKG AG + GGGPKKKPVSRSVKAGLQFPVGRI R+LK+GRY++RVG+GAPVY
Sbjct: 1   MDTGAKLKKG-AGERKGGGPKKKPVSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120

Query: 121 INPVLLRKKSERAVAAA 138
           INPVLL KK+E+A AAA
Sbjct: 121 INPVLLPKKAEKAAAAA 136

BLAST of Bhi03G001239 vs. Swiss-Prot
Match: sp|P19177|H2A_PETCR (Histone H2A OS=Petroselinum crispum OX=4043 PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 5.3e-59
Identity = 126/153 (82.35%), Postives = 136/153 (88.89%), Query Frame = 0

Query: 1   MDTGDKAKKGVAGRKGGGGPKKKPVSRSVKAGLQFPVGRIDRYLKEGRYSRRVGTGAPVY 60
           M+T  KAKKG  GRK  GGP+KK V+RSVKAGLQFPVGRI RYLK+GRY++RVGTGAPVY
Sbjct: 1   METAGKAKKGFGGRK--GGPRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKK RIIPRH+LLAVRNDEELGKLLAGVT AHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLLLAVRNDEELGKLLAGVTFAHGGVLPN 120

Query: 121 INPVLLRKKSERAVAAAKEPKSSSKSTRSPKKA 154
           INPVLL KK+  A  AAKEPKS SK+ +SPKKA
Sbjct: 121 INPVLLPKKT--AEKAAKEPKSPSKAGKSPKKA 149

BLAST of Bhi03G001239 vs. Swiss-Prot
Match: sp|Q2HU68|H2A1_MEDTR (Probable histone H2A.1 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g1v1 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 7.0e-59
Identity = 122/153 (79.74%), Postives = 133/153 (86.93%), Query Frame = 0

Query: 1   MDTGDKAKKGVAGRKGGGGPKKKPVSRSVKAGLQFPVGRIDRYLKEGRYSRRVGTGAPVY 60
           MD   K KKG  GRK  GGP+KK V+RS +AGLQFPVGRI RYLK+GRY++RVGTGAPVY
Sbjct: 1   MDASTKTKKGAGGRK--GGPRKKSVTRSTRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120

Query: 121 INPVLLRKKSERAVAAAKEPKSSSKSTRSPKKA 154
           INP+LL KK+E+A    K P   SK+T+SPKKA
Sbjct: 121 INPILLPKKNEKAATTTKSP---SKATKSPKKA 148

BLAST of Bhi03G001239 vs. TAIR10
Match: AT5G02560.2 (histone H2A 12)

HSP 1 Score: 220.3 bits (560), Expect = 8.1e-58
Identity = 119/162 (73.46%), Postives = 127/162 (78.40%), Query Frame = 0

Query: 1   MDTGDKAKKGVAGRKGGGGPKKKPVSRSVKAGLQFPVGRIDRYLKEGRYSRRVGTGAPVY 60
           MD+G K KKG AGR+ GGGPKKKPVSRSVK+GLQFPVGRI RYLK+GRYS+RVGTGAPVY
Sbjct: 1   MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVY 60

Query: 61  LAAVLEYLAAE------------------------VLELAGNAARDNKKNRIIPRHVLLA 120
           LAAVLEYLAAE                        VLELAGNAARDNKKNRIIPRHVLLA
Sbjct: 61  LAAVLEYLAAENSCGFCSVASLTIYRCRMSSSDFRVLELAGNAARDNKKNRIIPRHVLLA 120

Query: 121 VRNDEELGKLLAGVTIAHGGVLPNINPVLLRKKSERAVAAAK 139
           VRNDEELG LL GVTIAHGGVLPNINP+LL KKSE+A +  K
Sbjct: 121 VRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAASTTK 162

BLAST of Bhi03G001239 vs. TAIR10
Match: AT5G59870.1 (histone H2A 6)

HSP 1 Score: 200.3 bits (508), Expect = 8.7e-52
Identity = 109/153 (71.24%), Postives = 126/153 (82.35%), Query Frame = 0

Query: 1   MDTGDKAKKGVAGRKGGGGPKKKPVSRSVKAGLQFPVGRIDRYLKEGRYSRRVGTGAPVY 60
           M++  K KK   GRK  G PK K VS+S+KAGLQFPVGRI R+LK+GRY++R+G GAPVY
Sbjct: 1   MESTGKVKKAFGGRKPPGAPKTKSVSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           +AAVLEYLAAEVLELAGNAARDNKK+RIIPRH+LLA+RNDEELGKLL+GVTIAHGGVLPN
Sbjct: 61  MAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPN 120

Query: 121 INPVLLRKKSERAVAAAKEPKSSSKSTRSPKKA 154
           IN VLL KKS    A   E K++    +SPKKA
Sbjct: 121 INSVLLPKKSATKPA---EEKATKSPVKSPKKA 150

BLAST of Bhi03G001239 vs. TAIR10
Match: AT5G27670.1 (histone H2A 7)

HSP 1 Score: 191.4 bits (485), Expect = 4.0e-49
Identity = 107/148 (72.30%), Postives = 120/148 (81.08%), Query Frame = 0

Query: 6   KAKKGVAGRKGGGGPKKKPVSRSVKAGLQFPVGRIDRYLKEGRYSRRVGTGAPVYLAAVL 65
           K  +G  GRK  GG +KK VS+SVKAGLQFPVGRI RYLK+GRY+ R G+GAPVYLAAVL
Sbjct: 9   KPTRGAGGRK--GGDRKKSVSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVL 68

Query: 66  EYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVL 125
           EYLAAEVLELAGNAARDNKKNRI PRH+ LA+RNDEELG+LL GVTIA GGVLPNINPVL
Sbjct: 69  EYLAAEVLELAGNAARDNKKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVL 128

Query: 126 LRKKSERAVAAAKEPKSSSKSTRSPKKA 154
           L KKS     A+      + +T+SPKKA
Sbjct: 129 LPKKS----TASSSQAEKASATKSPKKA 150

BLAST of Bhi03G001239 vs. TAIR10
Match: AT4G27230.1 (histone H2A 2)

HSP 1 Score: 171.0 bits (432), Expect = 5.6e-43
Identity = 88/118 (74.58%), Postives = 100/118 (84.75%), Query Frame = 0

Query: 13  GRKGGGGPKKKPVSRSVKAGLQFPVGRIDRYLKEGRYSRRVGTGAPVYLAAVLEYLAAEV 72
           G++ G G  KK  SRS KAGLQFPVGRI R+LK G+Y+ RVG GAPVYLAAVLEYLAAEV
Sbjct: 5   GKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEV 64

Query: 73  LELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLRKKS 131
           LELAGNAARDNKK RI+PRH+ LAVRNDEEL KLL  VTIA+GGV+PNI+ +LL KK+
Sbjct: 65  LELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122

BLAST of Bhi03G001239 vs. TAIR10
Match: AT3G20670.1 (histone H2A 13)

HSP 1 Score: 170.2 bits (430), Expect = 9.6e-43
Identity = 90/127 (70.87%), Postives = 103/127 (81.10%), Query Frame = 0

Query: 13  GRKGGGGPKKKPVSRSVKAGLQFPVGRIDRYLKEGRYSRRVGTGAPVYLAAVLEYLAAEV 72
           G+  G G  KK  SRS KAGLQFPVGRI R+LK G+Y+ RVG GAPVYLAAVLEYLAAEV
Sbjct: 5   GKTLGSGVAKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAAEV 64

Query: 73  LELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLRKKSER 132
           LELAGNAARDNKK RI+PRH+ LAVRNDEEL KLL  VTIA+GGV+PNI+ +LL KK+  
Sbjct: 65  LELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKAGA 124

Query: 133 AVAAAKE 140
           +  +A E
Sbjct: 125 SKPSADE 131

BLAST of Bhi03G001239 vs. TrEMBL
Match: tr|A0A1S3BHV2|A0A1S3BHV2_CUCME (Histone H2A OS=Cucumis melo OX=3656 GN=LOC103490019 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.5e-66
Identity = 139/153 (90.85%), Postives = 143/153 (93.46%), Query Frame = 0

Query: 1   MDTGDKAKKGVAGRKGGGGPKKKPVSRSVKAGLQFPVGRIDRYLKEGRYSRRVGTGAPVY 60
           MD+G KAKKG AGR+GG GPKKKPVSRSVKAGLQFPVGRI RYLK GRYS+RVGTGAPVY
Sbjct: 1   MDSGGKAKKGFAGRRGGAGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSQRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120

Query: 121 INPVLLRKKSERAVAAAKEPKSSSKSTRSPKKA 154
           INPVLL KKSERA  AAKEPKS SK T+SPKKA
Sbjct: 121 INPVLLPKKSERAGTAAKEPKSPSKGTKSPKKA 153

BLAST of Bhi03G001239 vs. TrEMBL
Match: tr|A0A0A0KXF2|A0A0A0KXF2_CUCSA (Histone H2A OS=Cucumis sativus OX=3659 GN=Csa_4G293870 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 4.1e-64
Identity = 138/153 (90.20%), Postives = 142/153 (92.81%), Query Frame = 0

Query: 1   MDTGDKAKKGVAGRKGGGGPKKKPVSRSVKAGLQFPVGRIDRYLKEGRYSRRVGTGAPVY 60
           MD+G KAKKG AGR+GG   KKKPVSRSVKAGLQFPVGRI RYLK GRYS+RVGTGAPVY
Sbjct: 1   MDSGGKAKKGFAGRRGGADSKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSQRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120

Query: 121 INPVLLRKKSERAVAAAKEPKSSSKSTRSPKKA 154
           INPVLL KKSERA AAAKEPKS SK T+SPKKA
Sbjct: 121 INPVLLPKKSERA-AAAKEPKSPSKGTKSPKKA 152

BLAST of Bhi03G001239 vs. TrEMBL
Match: tr|A0A2N9IZ61|A0A2N9IZ61_FAGSY (Histone H2A OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58509 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 4.5e-63
Identity = 135/153 (88.24%), Postives = 144/153 (94.12%), Query Frame = 0

Query: 1   MDTGDKAKKGVAGRKGGGGPKKKPVSRSVKAGLQFPVGRIDRYLKEGRYSRRVGTGAPVY 60
           MDTG K K+G AGRK GGGPKKKPVSRSVKAGLQFPVGRI RYLK+GRYS+RVGTGAPVY
Sbjct: 1   MDTGGKVKRGAAGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120

Query: 121 INPVLLRKKSERAVAAAKEPKSSSKSTRSPKKA 154
           INPVLL KK+E+  AAAKEPKS +++T+SPKKA
Sbjct: 121 INPVLLPKKTEK--AAAKEPKSPARATKSPKKA 150

BLAST of Bhi03G001239 vs. TrEMBL
Match: tr|A0A0B0N326|A0A0B0N326_GOSAR (Histone H2A OS=Gossypium arboreum OX=29729 GN=F383_01040 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.3e-62
Identity = 137/154 (88.96%), Postives = 143/154 (92.86%), Query Frame = 0

Query: 1   MDTGDKAKKGVAGRKGGGGPKKKPVSRSVKAGLQFPVGRIDRYLKEGRYSRRVGTGAPVY 60
           MDTG K KKG  GRK GGGPKKKPVSRSVKAGLQFPVGRI RYLK+GRYS+RVGTGAPVY
Sbjct: 1   MDTGSKVKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120

Query: 121 INPVLLRKKSERAVAAAKEPKSSSKST-RSPKKA 154
           INP+LL KK+ER  AAAKEPKS SK+T +SPKKA
Sbjct: 121 INPILLPKKNER--AAAKEPKSPSKATKKSPKKA 151

BLAST of Bhi03G001239 vs. TrEMBL
Match: tr|C6SZZ2|C6SZZ2_SOYBN (Histone H2A OS=Glycine max OX=3847 GN=100306579 PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 5.0e-62
Identity = 135/153 (88.24%), Postives = 140/153 (91.50%), Query Frame = 0

Query: 1   MDTGDKAKKGVAGRKGGGGPKKKPVSRSVKAGLQFPVGRIDRYLKEGRYSRRVGTGAPVY 60
           MD G K KKG  GRK GGGPKKKPVSRSVKAGLQFPVGRI RYLK+GRY++RVGTGAPVY
Sbjct: 1   MDAGGKIKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120

Query: 121 INPVLLRKKSERAVAAAKEPKSSSKSTRSPKKA 154
           INPVLL KK+ER   AAKEPKS SK+T SPKKA
Sbjct: 121 INPVLLPKKTER---AAKEPKSPSKATXSPKKA 149

BLAST of Bhi03G001239 vs. NCBI nr
Match: XP_008447608.1 (PREDICTED: probable histone H2A.4 [Cucumis melo])

HSP 1 Score: 261.2 bits (666), Expect = 2.3e-66
Identity = 139/153 (90.85%), Postives = 143/153 (93.46%), Query Frame = 0

Query: 1   MDTGDKAKKGVAGRKGGGGPKKKPVSRSVKAGLQFPVGRIDRYLKEGRYSRRVGTGAPVY 60
           MD+G KAKKG AGR+GG GPKKKPVSRSVKAGLQFPVGRI RYLK GRYS+RVGTGAPVY
Sbjct: 1   MDSGGKAKKGFAGRRGGAGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSQRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120

Query: 121 INPVLLRKKSERAVAAAKEPKSSSKSTRSPKKA 154
           INPVLL KKSERA  AAKEPKS SK T+SPKKA
Sbjct: 121 INPVLLPKKSERAGTAAKEPKSPSKGTKSPKKA 153

BLAST of Bhi03G001239 vs. NCBI nr
Match: XP_022143711.1 (histone H2A [Momordica charantia])

HSP 1 Score: 253.4 bits (646), Expect = 4.7e-64
Identity = 139/153 (90.85%), Postives = 143/153 (93.46%), Query Frame = 0

Query: 1   MDTGDKAKKGVAGRKGGGGPKKKPVSRSVKAGLQFPVGRIDRYLKEGRYSRRVGTGAPVY 60
           MD+G KAKKG AGR+ GGGPKKKPVSRSVKAGLQFPVGRI RYLK GRYS+RVGTGAPVY
Sbjct: 1   MDSGGKAKKGAAGRR-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSQRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120

Query: 121 INPVLLRKKSERAVAAAKEPKSSSKSTRSPKKA 154
           INPVLL KKSERA AA KEPKS SK T+SPKKA
Sbjct: 121 INPVLLPKKSERA-AAGKEPKSPSKGTKSPKKA 151

BLAST of Bhi03G001239 vs. NCBI nr
Match: XP_004142082.1 (PREDICTED: probable histone H2A.4 [Cucumis sativus] >KGN54228.1 hypothetical protein Csa_4G293870 [Cucumis sativus])

HSP 1 Score: 253.1 bits (645), Expect = 6.2e-64
Identity = 138/153 (90.20%), Postives = 142/153 (92.81%), Query Frame = 0

Query: 1   MDTGDKAKKGVAGRKGGGGPKKKPVSRSVKAGLQFPVGRIDRYLKEGRYSRRVGTGAPVY 60
           MD+G KAKKG AGR+GG   KKKPVSRSVKAGLQFPVGRI RYLK GRYS+RVGTGAPVY
Sbjct: 1   MDSGGKAKKGFAGRRGGADSKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSQRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120

Query: 121 INPVLLRKKSERAVAAAKEPKSSSKSTRSPKKA 154
           INPVLL KKSERA AAAKEPKS SK T+SPKKA
Sbjct: 121 INPVLLPKKSERA-AAAKEPKSPSKGTKSPKKA 152

BLAST of Bhi03G001239 vs. NCBI nr
Match: KHG05601.1 (putative histone H2A [Gossypium arboreum])

HSP 1 Score: 248.1 bits (632), Expect = 2.0e-62
Identity = 137/154 (88.96%), Postives = 143/154 (92.86%), Query Frame = 0

Query: 1   MDTGDKAKKGVAGRKGGGGPKKKPVSRSVKAGLQFPVGRIDRYLKEGRYSRRVGTGAPVY 60
           MDTG K KKG  GRK GGGPKKKPVSRSVKAGLQFPVGRI RYLK+GRYS+RVGTGAPVY
Sbjct: 1   MDTGSKVKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120

Query: 121 INPVLLRKKSERAVAAAKEPKSSSKST-RSPKKA 154
           INP+LL KK+ER  AAAKEPKS SK+T +SPKKA
Sbjct: 121 INPILLPKKNER--AAAKEPKSPSKATKKSPKKA 151

BLAST of Bhi03G001239 vs. NCBI nr
Match: XP_017623470.1 (PREDICTED: histone H2A-like [Gossypium arboreum])

HSP 1 Score: 247.3 bits (630), Expect = 3.4e-62
Identity = 136/154 (88.31%), Postives = 143/154 (92.86%), Query Frame = 0

Query: 1   MDTGDKAKKGVAGRKGGGGPKKKPVSRSVKAGLQFPVGRIDRYLKEGRYSRRVGTGAPVY 60
           MDTG K KKG  GRK GGGPKKKPVSRSVKAGLQFPVGRI RYLK+GRYS+RVGTGAPVY
Sbjct: 1   MDTGSKVKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120

Query: 121 INPVLLRKKSERAVAAAKEPKSSSKST-RSPKKA 154
           +NP+LL KK+ER  AAAKEPKS SK+T +SPKKA
Sbjct: 121 LNPILLPKKNER--AAAKEPKSPSKATKKSPKKA 151

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
sp|Q9LZ46|H2A4_ARATH1.3e-6086.23Probable histone H2A.4 OS=Arabidopsis thaliana OX=3702 GN=At5g02560 PE=1 SV=1[more]
sp|Q2HU65|H2A2_MEDTR6.3e-6081.17Probable histone H2A.2 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g4v1 P... [more]
sp|Q9M531|H2A_EUPES2.4e-5988.32Histone H2A OS=Euphorbia esula OX=3993 PE=2 SV=1[more]
sp|P19177|H2A_PETCR5.3e-5982.35Histone H2A OS=Petroselinum crispum OX=4043 PE=2 SV=1[more]
sp|Q2HU68|H2A1_MEDTR7.0e-5979.74Probable histone H2A.1 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g1v1 P... [more]
Match NameE-valueIdentityDescription
AT5G02560.28.1e-5873.46histone H2A 12[more]
AT5G59870.18.7e-5271.24histone H2A 6[more]
AT5G27670.14.0e-4972.30histone H2A 7[more]
AT4G27230.15.6e-4374.58histone H2A 2[more]
AT3G20670.19.6e-4370.87histone H2A 13[more]
Match NameE-valueIdentityDescription
tr|A0A1S3BHV2|A0A1S3BHV2_CUCME1.5e-6690.85Histone H2A OS=Cucumis melo OX=3656 GN=LOC103490019 PE=3 SV=1[more]
tr|A0A0A0KXF2|A0A0A0KXF2_CUCSA4.1e-6490.20Histone H2A OS=Cucumis sativus OX=3659 GN=Csa_4G293870 PE=3 SV=1[more]
tr|A0A2N9IZ61|A0A2N9IZ61_FAGSY4.5e-6388.24Histone H2A OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58509 PE=3 SV=1[more]
tr|A0A0B0N326|A0A0B0N326_GOSAR1.3e-6288.96Histone H2A OS=Gossypium arboreum OX=29729 GN=F383_01040 PE=3 SV=1[more]
tr|C6SZZ2|C6SZZ2_SOYBN5.0e-6288.24Histone H2A OS=Glycine max OX=3847 GN=100306579 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
XP_008447608.12.3e-6690.85PREDICTED: probable histone H2A.4 [Cucumis melo][more]
XP_022143711.14.7e-6490.85histone H2A [Momordica charantia][more]
XP_004142082.16.2e-6490.20PREDICTED: probable histone H2A.4 [Cucumis sativus] >KGN54228.1 hypothetical pro... [more]
KHG05601.12.0e-6288.96putative histone H2A [Gossypium arboreum][more]
XP_017623470.13.4e-6288.31PREDICTED: histone H2A-like [Gossypium arboreum][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0000786nucleosome
Vocabulary: INTERPRO
TermDefinition
IPR032458Histone_H2A_CS
IPR032454Histone_H2A_C
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold
IPR002119Histone_H2A
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006325 chromatin organization
biological_process GO:0008150 biological_process
biological_process GO:0006342 chromatin silencing
cellular_component GO:0000790 nuclear chromatin
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
cellular_component GO:0000775 chromosome, centromeric region
cellular_component GO:0000792 heterochromatin
cellular_component GO:0005694 chromosome
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003682 chromatin binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi03M001239Bhi03M001239mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 67..80
score: 89.46
coord: 109..127
score: 71.73
coord: 81..95
score: 73.78
coord: 23..45
score: 68.49
coord: 52..67
score: 86.43
IPR002119Histone H2ASMARTSM00414h2a4coord: 13..132
e-value: 1.2E-76
score: 270.6
IPR002119Histone H2ACDDcd00074H2Acoord: 25..129
e-value: 1.69104E-62
score: 189.468
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 11..147
e-value: 3.0E-60
score: 203.7
IPR009072Histone-foldSUPERFAMILYSSF47113Histone-foldcoord: 12..107
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 21..98
e-value: 6.7E-12
score: 45.8
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 101..132
e-value: 4.5E-17
score: 61.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..153
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 4..153
NoneNo IPR availablePANTHERPTHR23430:SF80SUBFAMILY NOT NAMEDcoord: 4..153
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 31..37

The following gene(s) are paralogous to this gene:

None