Bhi02G000302 (gene) Wax gourd

Overview
NameBhi02G000302
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionCDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
Locationchr2 : 7500532 .. 7501593 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTACAAATAGGTTAACTGTTTGGAAATGCTATTATATTTCGAATATAGAAAGTGGGCAAAATTTGTATGACTTTTTAATCGCAATCCACACGGCATTCGCTTTGGCTTTGAATCAGATTCTCACTCCCTATAAATAAATAATACTCATTCCCCTCTCAGAAATCTTCGTCGATTCATTTCGATTCATCCTTTTCTTCTTCTCCCGATCAGATTCTTCATCTTCTCCCTCCTCAGATTTCTTTGCCCTAAATCCATCAAATTCAAATCCATGGCTGCAAACGGCTCCTACGATTGGGCGGACCAGTGGGACTACAACGACTCCACGGACGTAGTCACAGAGAACAAGAAGAAGAGCGGCGGCGGAAACAGTACGGCCAAATACAAGCAGAAGGTCGGCGAAGGGCTTGGGAAGACCAAAGCTGTGGCCTCTAATGGCGTCAAAAGGGTTAAGGAAGGAACCTCTCTTGGCTTCCAATGGATCAAAGATAAATATAATAAAACTGCTCATAAGAAATAGAATTCATTCTTTTTTTTTCTCTGTATATCTCTGCTTTTCTTTTGCTTATCTCTGAGCTCTGTATCTTTTTCTGTTGGTTATATAGATACATGTACACCATAGATTATTCTTTTATTGATATAGATTTCATTTCATCTCTGTTTTTCGTTCTTTTTTCCTTTTCCTCTTTTGTTTTGGTTCCGATTTTGTTATACACACTTCCTTTCGATTCGATTGTTCGATTGTTCAATTCTTGATTTTCAATTCTCTGTTTCTAAGTTTGTTGAAACCTTCGCTTCAGCAACATGTATAAACCTTATCAGGGCAAATTAATATACAAAGCTGAAAGGTGAAGGTGGAGATCTCGCCATGTAACTTTGAAATTGTTACATTTATTTATGGGGAAACAAATTTAATTTTGACCCAAAAATTCAATTTCGATCTTCTAATTCTTATTATTGATTCAATTTCCGCTAATTTAATCACTAATAAATGTTCATAAATTAATAAATTTATTGATTTCCATAATATAAAATCGTACAAAATTCATAAATTTCAGGAAAAAA

mRNA sequence

GTACAAATAGGTTAACTGTTTGGAAATGCTATTATATTTCGAATATAGAAAGTGGGCAAAATTTGTATGACTTTTTAATCGCAATCCACACGGCATTCGCTTTGGCTTTGAATCAGATTCTCACTCCCTATAAATAAATAATACTCATTCCCCTCTCAGAAATCTTCGTCGATTCATTTCGATTCATCCTTTTCTTCTTCTCCCGATCAGATTCTTCATCTTCTCCCTCCTCAGATTTCTTTGCCCTAAATCCATCAAATTCAAATCCATGGCTGCAAACGGCTCCTACGATTGGGCGGACCAGTGGGACTACAACGACTCCACGGACGTAGTCACAGAGAACAAGAAGAAGAGCGGCGGCGGAAACAGTACGGCCAAATACAAGCAGAAGGTCGGCGAAGGGCTTGGGAAGACCAAAGCTGTGGCCTCTAATGGCGTCAAAAGGGTTAAGGAAGGAACCTCTCTTGGCTTCCAATGGATCAAAGATAAATATAATAAAACTGCTCATAAGAAATAGAATTCATTCTTTTTTTTTCTCTGTATATCTCTGCTTTTCTTTTGCTTATCTCTGAGCTCTGTATCTTTTTCTGTTGGTTATATAGATACATGTACACCATAGATTATTCTTTTATTGATATAGATTTCATTTCATCTCTGTTTTTCGTTCTTTTTTCCTTTTCCTCTTTTGTTTTGGTTCCGATTTTGTTATACACACTTCCTTTCGATTCGATTGTTCGATTGTTCAATTCTTGATTTTCAATTCTCTGTTTCTAAGTTTGTTGAAACCTTCGCTTCAGCAACATGTATAAACCTTATCAGGGCAAATTAATATACAAAGCTGAAAGGTGAAGGTGGAGATCTCGCCATGTAACTTTGAAATTGTTACATTTATTTATGGGGAAACAAATTTAATTTTGACCCAAAAATTCAATTTCGATCTTCTAATTCTTATTATTGATTCAATTTCCGCTAATTTAATCACTAATAAATGTTCATAAATTAATAAATTTATTGATTTCCATAATATAAAATCGTACAAAATTCATAAATTTCAGGAAAAAA

Coding sequence (CDS)

ATGGCTGCAAACGGCTCCTACGATTGGGCGGACCAGTGGGACTACAACGACTCCACGGACGTAGTCACAGAGAACAAGAAGAAGAGCGGCGGCGGAAACAGTACGGCCAAATACAAGCAGAAGGTCGGCGAAGGGCTTGGGAAGACCAAAGCTGTGGCCTCTAATGGCGTCAAAAGGGTTAAGGAAGGAACCTCTCTTGGCTTCCAATGGATCAAAGATAAATATAATAAAACTGCTCATAAGAAATAG

Protein sequence

MAANGSYDWADQWDYNDSTDVVTENKKKSGGGNSTAKYKQKVGEGLGKTKAVASNGVKRVKEGTSLGFQWIKDKYNKTAHKK
Homology
[Close]
BLAST of Bhi02G000302 vs. TAIR10
Match: AT1G19020.1 (unknown protein)

HSP 1 Score: 77.8 bits (190), Expect = 3.5e-15
Identity = 40/86 (46.51%), Postives = 58/86 (67.44%), Query Frame = 0 

Query: 4  NGSYDWADQWDYNDST-------DVVTENKKKSGGGNSTAKYKQKVGEGLGKTKAVASNG 63
          NG+  WADQWD +  +                SG  ++T KYK+K+G+GL KTKAVAS+G
Sbjct: 2  NGT-SWADQWDNSGDSAKGGRIGSGAVVRSSGSGATSNTTKYKEKMGQGLDKTKAVASSG 61

Query: 64 VKRVKEGTSLGFQWIKDKYNKTAHKK 83
           K++K G+++GF+W+KDKY+KT HK+
Sbjct: 62 FKKLKTGSAIGFRWVKDKYHKTTHKQ 86

[Close]
BLAST of Bhi02G000302 vs. TrEMBL
Match: tr|A0A1S3BW93|A0A1S3BW93_CUCME (uncharacterized protein LOC103493940 OS=Cucumis melo OX=3656 GN=LOC103493940 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.4e-31
Identity = 72/81 (88.89%), Postives = 74/81 (91.36%), Query Frame = 0 

Query: 4  NGSYDWADQWDYNDSTDVVTENKKK--SGGGNSTAKYKQKVGEGLGKTKAVASNGVKRVK 63
          N SYDWADQWDYNDS DVVT NKKK    GGNS+AKYKQKVGEGLGKTKAVASNGVK+VK
Sbjct: 6  NSSYDWADQWDYNDSADVVTNNKKKISGSGGNSSAKYKQKVGEGLGKTKAVASNGVKKVK 65

Query: 64 EGTSLGFQWIKDKYNKTAHKK 83
          EGTSLGFQWIKDKYNKTAHKK
Sbjct: 66 EGTSLGFQWIKDKYNKTAHKK 86

[Close]
BLAST of Bhi02G000302 vs. TrEMBL
Match: tr|A0A067KH50|A0A067KH50_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_11530 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 7.4e-20
Identity = 56/83 (67.47%), Postives = 59/83 (71.08%), Query Frame = 0 

Query: 1  MAANGSY--DWADQWDYNDSTDVVTENKKKSGGGNSTAKYKQKVGEGLGKTKAVASNGVK 60
          M  NGSY   WADQWD         + KK SG  NSTAKYKQKVGEGLGKTKAVAS G+K
Sbjct: 1  MNGNGSYGTSWADQWDDGPDPVYNYQTKKSSGATNSTAKYKQKVGEGLGKTKAVASTGIK 60

Query: 61 RVKEGTSLGFQWIKDKYNKTAHK 82
          +VKEGT  GF WIKDKYNKT  K
Sbjct: 61 KVKEGTITGFHWIKDKYNKTKQK 83

[Close]
BLAST of Bhi02G000302 vs. TrEMBL
Match: tr|A0A2P4MDZ2|A0A2P4MDZ2_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_35228 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.1e-18
Identity = 52/83 (62.65%), Postives = 60/83 (72.29%), Query Frame = 0 

Query: 1  MAANGSY--DWADQWDYNDSTDVVTENKKKSGGGNSTAKYKQKVGEGLGKTKAVASNGVK 60
          M  N +Y   WADQWDY++   +      K  GG S AKYKQKVGEGLGKTKAVAS G+K
Sbjct: 1  MEGNNTYGASWADQWDYSNPDPIPNAADTKKNGGTS-AKYKQKVGEGLGKTKAVASTGIK 60

Query: 61 RVKEGTSLGFQWIKDKYNKTAHK 82
          +VKEGT+LGF WIKDKY+KT  K
Sbjct: 61 KVKEGTTLGFHWIKDKYHKTTQK 82

[Close]
BLAST of Bhi02G000302 vs. TrEMBL
Match: tr|A0A2C9VRM4|A0A2C9VRM4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G100300 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 9.1e-18
Identity = 51/84 (60.71%), Postives = 60/84 (71.43%), Query Frame = 0 

Query: 1  MAANGSYD--WADQWDYNDSTDVVTENKKKSGGGNSTAKYKQKVGEGLGKTKAVASNGVK 60
          M  N SY+  WADQWD         +N+K S   +S AKYKQKVGEGLGKTKAVAS G+K
Sbjct: 1  MNGNSSYETSWADQWDNGPDPVYDYQNRKSSDNTSSAAKYKQKVGEGLGKTKAVASTGMK 60

Query: 61 RVKEGTSLGFQWIKDKYNKTAHKK 83
          +VKEGT  GF WIKDKY+K+ HK+
Sbjct: 61 KVKEGTITGFHWIKDKYHKSTHKR 84

[Close]
BLAST of Bhi02G000302 vs. TrEMBL
Match: tr|W9S9J8|W9S9J8_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_004752 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.2e-17
Identity = 53/84 (63.10%), Postives = 59/84 (70.24%), Query Frame = 0 

Query: 1  MAANGS---YDWADQWDYNDSTDVVTENKKKSGGGNSTAKYKQKVGEGLGKTKAVASNGV 60
          MA NGS     WADQWD N+   V    K  +G G +  KYKQKVGEG  KTKAVAS GV
Sbjct: 1  MATNGSSYETSWADQWD-NNPDPVYDAKKSSTGNGGAAVKYKQKVGEGFVKTKAVASTGV 60

Query: 61 KRVKEGTSLGFQWIKDKYNKTAHK 82
          K+VKEGTS+GFQWIKDKY+KT  K
Sbjct: 61 KKVKEGTSMGFQWIKDKYHKTTQK 83

[Close]
BLAST of Bhi02G000302 vs. NCBI nr
Match: XP_022921775.1 (uncharacterized protein LOC111429929 [Cucurbita moschata])

HSP 1 Score: 154.1 bits (388), Expect = 2.1e-34
Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 0 

Query: 1  MAANGSYDWADQWDYNDSTDVVTENKKKSGGGNSTAKYKQKVGEGLGKTKAVASNGVKRV 60
          MA NGSYDWADQWDY+DS DVVTEN KKSGGGN+T KYKQKVGEGLGKTKAVASNGVK+V
Sbjct: 1  MAGNGSYDWADQWDYSDSKDVVTENTKKSGGGNTTTKYKQKVGEGLGKTKAVASNGVKKV 60

Query: 61 KEGTSLGFQWIKDKYNKTAHKK 83
          K+GTSLGFQWIKDKYNKTAHKK
Sbjct: 61 KQGTSLGFQWIKDKYNKTAHKK 82

[Close]
BLAST of Bhi02G000302 vs. NCBI nr
Match: XP_008453134.1 (PREDICTED: uncharacterized protein LOC103493940 [Cucumis melo])

HSP 1 Score: 144.1 bits (362), Expect = 2.2e-31
Identity = 72/81 (88.89%), Postives = 74/81 (91.36%), Query Frame = 0 

Query: 4  NGSYDWADQWDYNDSTDVVTENKKK--SGGGNSTAKYKQKVGEGLGKTKAVASNGVKRVK 63
          N SYDWADQWDYNDS DVVT NKKK    GGNS+AKYKQKVGEGLGKTKAVASNGVK+VK
Sbjct: 6  NSSYDWADQWDYNDSADVVTNNKKKISGSGGNSSAKYKQKVGEGLGKTKAVASNGVKKVK 65

Query: 64 EGTSLGFQWIKDKYNKTAHKK 83
          EGTSLGFQWIKDKYNKTAHKK
Sbjct: 66 EGTSLGFQWIKDKYNKTAHKK 86

[Close]
BLAST of Bhi02G000302 vs. NCBI nr
Match: XP_023516550.1 (uncharacterized protein LOC111780400 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 130.2 bits (326), Expect = 3.2e-27
Identity = 65/82 (79.27%), Postives = 68/82 (82.93%), Query Frame = 0 

Query: 1   MAANGSYDWADQWDYNDSTDVVTENKKKSGGGNSTAKYKQKVGEGLGKTKAVASNGVKRV 60
           MA +GSYDWADQWDY+DS DVVTEN            YKQKVGEGLGKTKAVASNGVK+V
Sbjct: 39  MAGSGSYDWADQWDYSDSKDVVTENXXXXXXXXXXXXYKQKVGEGLGKTKAVASNGVKKV 98

Query: 61  KEGTSLGFQWIKDKYNKTAHKK 83
           KEGTSLGFQWIKDKYNKTAHKK
Sbjct: 99  KEGTSLGFQWIKDKYNKTAHKK 120

[Close]
BLAST of Bhi02G000302 vs. NCBI nr
Match: XP_022988421.1 (uncharacterized protein LOC111485668 [Cucurbita maxima] >XP_022988422.1 uncharacterized protein LOC111485668 [Cucurbita maxima])

HSP 1 Score: 122.5 bits (306), Expect = 6.8e-25
Identity = 64/83 (77.11%), Postives = 66/83 (79.52%), Query Frame = 0 

Query: 1   MAANGSYDWADQWDYNDSTDVVT-ENKKKSGGGNSTAKYKQKVGEGLGKTKAVASNGVKR 60
           MA NGSYDWADQWDY+DS DVVT               YKQKVGEGLGKTKAVASNGVK+
Sbjct: 39  MAGNGSYDWADQWDYSDSKDVVTXXXXXXXXXXXXXXXYKQKVGEGLGKTKAVASNGVKK 98

Query: 61  VKEGTSLGFQWIKDKYNKTAHKK 83
           VKEGTSLGFQWIKDKYNKTAHKK
Sbjct: 99  VKEGTSLGFQWIKDKYNKTAHKK 121

[Close]
BLAST of Bhi02G000302 vs. NCBI nr
Match: XP_012080143.1 (uncharacterized protein LOC105640439 [Jatropha curcas] >KDP31154.1 hypothetical protein JCGZ_11530 [Jatropha curcas])

HSP 1 Score: 105.1 bits (261), Expect = 1.1e-19
Identity = 56/83 (67.47%), Postives = 59/83 (71.08%), Query Frame = 0 

Query: 1  MAANGSY--DWADQWDYNDSTDVVTENKKKSGGGNSTAKYKQKVGEGLGKTKAVASNGVK 60
          M  NGSY   WADQWD         + KK SG  NSTAKYKQKVGEGLGKTKAVAS G+K
Sbjct: 1  MNGNGSYGTSWADQWDDGPDPVYNYQTKKSSGATNSTAKYKQKVGEGLGKTKAVASTGIK 60

Query: 61 RVKEGTSLGFQWIKDKYNKTAHK 82
          +VKEGT  GF WIKDKYNKT  K
Sbjct: 61 KVKEGTITGFHWIKDKYNKTKQK 83

The following BLAST results are available for this feature:
BLAST of Bhi02G000302 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi02G000302 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G19020.13.5e-1546.51unknown protein[more]
BLAST of Bhi02G000302 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BW93|A0A1S3BW93_CUCME1.4e-3188.89uncharacterized protein LOC103493940 OS=Cucumis melo OX=3656 GN=LOC103493940 PE=... [more]
tr|A0A067KH50|A0A067KH50_JATCU7.4e-2067.47Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_11530 PE=4 SV=1[more]
tr|A0A2P4MDZ2|A0A2P4MDZ2_QUESU3.1e-1862.65Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_35228 PE=4 SV=1[more]
tr|A0A2C9VRM4|A0A2C9VRM4_MANES9.1e-1860.71Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G100300 PE=4 SV=... [more]
tr|W9S9J8|W9S9J8_9ROSA1.2e-1763.10Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_004752 PE=4 SV=1[more]
BLAST of Bhi02G000302 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022921775.12.1e-3490.24uncharacterized protein LOC111429929 [Cucurbita moschata][more]
XP_008453134.12.2e-3188.89PREDICTED: uncharacterized protein LOC103493940 [Cucumis melo][more]
XP_023516550.13.2e-2779.27uncharacterized protein LOC111780400 [Cucurbita pepo subsp. pepo][more]
XP_022988421.16.8e-2577.11uncharacterized protein LOC111485668 [Cucurbita maxima] >XP_022988422.1 uncharac... [more]
XP_012080143.11.1e-1967.47uncharacterized protein LOC105640439 [Jatropha curcas] >KDP31154.1 hypothetical ... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016740 transferase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi02M000302Bhi02M000302mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33386:SF4SUBFAMILY NOT NAMEDcoord: 3..81
NoneNo IPR availablePANTHERPTHR33386FAMILY NOT NAMEDcoord: 3..81

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi02G000302Csa1G005770Cucumber (Chinese Long) v2cuwgoB095
Bhi02G000302MELO3C017124Melon (DHL92) v3.5.1mewgoB291
Bhi02G000302ClCG06G016690Watermelon (Charleston Gray)wcgwgoB541
Bhi02G000302CSPI01G01760Wild cucumber (PI 183967)cpiwgoB098
Bhi02G000302CmoCh10G001610Cucurbita moschata (Rifu)cmowgoB0081
Bhi02G000302Lsi06G015180Bottle gourd (USVL1VR-Ls)lsiwgoB501
Bhi02G000302CsGy1G001780Cucumber (Gy14) v2cgybwgoB092
Bhi02G000302MELO3C017124.2Melon (DHL92) v3.6.1medwgoB291
Bhi02G000302Carg10373Silver-seed gourdcarwgoB0449
Bhi02G000302CsaV3_1G001820Cucumber (Chinese Long) v3cucwgoB103
Bhi02G000302Cla019161Watermelon (97103) v1wgowmB678
Bhi02G000302Cla97C06G126290Watermelon (97103) v2wgowmbB649
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi02G000302Wax gourdwgowgoB122
Bhi02G000302Cucumber (Gy14) v1cgywgoB142
Bhi02G000302Cucumber (Gy14) v1cgywgoB417
Bhi02G000302Cucumber (Gy14) v1cgywgoB693
Bhi02G000302Cucumber (Gy14) v2cgybwgoB082
Bhi02G000302Cucurbita maxima (Rimu)cmawgoB0088
Bhi02G000302Cucurbita maxima (Rimu)cmawgoB0151
Bhi02G000302Cucurbita maxima (Rimu)cmawgoB0286
Bhi02G000302Cucurbita maxima (Rimu)cmawgoB0548
Bhi02G000302Cucurbita moschata (Rifu)cmowgoB0160
Bhi02G000302Cucurbita moschata (Rifu)cmowgoB0276
Bhi02G000302Cucurbita moschata (Rifu)cmowgoB0355
Bhi02G000302Cucurbita moschata (Rifu)cmowgoB0547
Bhi02G000302Cucurbita pepo (Zucchini)cpewgoB0063
Bhi02G000302Cucurbita pepo (Zucchini)cpewgoB0459
Bhi02G000302Cucurbita pepo (Zucchini)cpewgoB0665
Bhi02G000302Cucurbita pepo (Zucchini)cpewgoB0824
Bhi02G000302Cucurbita pepo (Zucchini)cpewgoB0883
Bhi02G000302Wild cucumber (PI 183967)cpiwgoB088
Bhi02G000302Wild cucumber (PI 183967)cpiwgoB356
Bhi02G000302Cucumber (Chinese Long) v3cucwgoB093
Bhi02G000302Cucumber (Chinese Long) v2cuwgoB086
Bhi02G000302Bottle gourd (USVL1VR-Ls)lsiwgoB285
Bhi02G000302Melon (DHL92) v3.6.1medwgoB195
Bhi02G000302Melon (DHL92) v3.6.1medwgoB446
Bhi02G000302Melon (DHL92) v3.5.1mewgoB193
Bhi02G000302Watermelon (Charleston Gray)wcgwgoB136
Bhi02G000302Watermelon (Charleston Gray)wcgwgoB256
Bhi02G000302Watermelon (97103) v2wgowmbB624
Bhi02G000302Watermelon (97103) v1wgowmB668
Bhi02G000302Silver-seed gourdcarwgoB0605
Bhi02G000302Silver-seed gourdcarwgoB0732
Bhi02G000302Silver-seed gourdcarwgoB1184