Bhi02G000197 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi02G000197
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	mitochondrial import inner membrane translocase subunit tim16
Location	chr2 : 5427245 .. 5429607 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTTGGGTATGCCCCTGTTCTTAGATTCTTGTTTTTCTTTTTTTGTTTGTAGGGTTTACAAGAAACCTAACAGCTAAATAGCTGCTTTGATTGATTTTGCAGCTCTAGCGGCTTTTACGATTCAGGACCTGTTCTCAAGGCCAGCCAATTAATCATGGTATCTCTCTTCTTTCTTTCTCTCCTTCTGACTTGATGGAGGATTGATTTCTAAGATAATGAGAAATAAATATGGAATCAAGAGCAGATGTCTAAACTTCATTTATGTTAATTTTATTTGAATTATTATGTTTCTATCTCATCCATTAGGTAATTTGTTTCCACATTGATTATAGATTATGGGGTTTAATTCATAGTTTTCATTTCGTTTCCAATTTTTCTCTGGCCGAAGTTTTGGCCAGGGAAAAGACGAGAGAGACACAAGTCTTGTAGATATTTTCCTCATATTACATCCCATTTTCCTTTTTCCCTTTTTTCCCCTCCTCTTTGTGTCTGTTCTAGATATTTTGTGAAATAATGCTGACCTTTCTTGTCATCCCGCTTTCTAAAGCGTTTCAACTTAAGCATATTTGAAATGTATTTGTGTATCACTTGTGTCATGTTATCTTTTCTTCGACTGTACATTGTTTTTTTACCCATCAAATCAGTGCCATCTAATTAGAACTGGTGTATTTATTTCTGCTATGTCAATGTCTTTAGTTTTGATAGAGGAGAGTAGTTATTGCATAATTTTTAAATTGTCTTATTCAGTTTAAGAACTTCATATAAGAGAGCCTCTTTGCTTGTATGTATTGGACAGGCTGCAAAAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCAAGGGCTTTTGTTCAAGCCTATCGTCAAGCCATTGCAAGTAAGTGCACACTTTTTATTCCACCATTTTTTTTTCCTTCTTTCTACTAGGTCCTATCGGAAGTTGGCCAATTTGTCGTCAATATCATGGTTATTGGAGTAAAATCTTTTTGGCGGGGTTGATGGGAACTTGATATATAGAACAAAAGAAACTTTCACATTGAACTATTAGAAGCTATAATGTACATGTGAGCTTGGGATGAACAAGCATTTTGCCAATGACAACAAAGTTCTTTATGCGCATAGTTTTATTCTGCTTTCAGATGATTGAAATTGGTATCAAAGCTTTTTTTTTTTCTTAATGTACTTGGGGAATGTTGACATCCTGAATTTCTATCTTTACATCCTTCCTCATCTTTGAAAGCCTGAATAATCTATTCTTAGATTTTCGACAAGTGGTCAAAAGAACTTTGTTATTTTTCTAGCCTGCGACATTGTCAAGCGTTTTGCAAATAAAAGCTAAGTTTTATATTGCGCATAGATTATAATTATTAGTCTTTTTGTTGACAAATAGATACAAAACCTTTTTGAGTGTTCATGACCTGTATGACAAGCACTTCCAACCTCTGGGCACCCTTAAAAGGCTGAACAATATCTTCAAGATCTTTGGACAAAATGCTTTTATTGGACATGTACTTTATTAGTTTGGACAAATTTGGTTGTTTATACAAAGTTTTTTTTTTGGCAAAATTACCTTCTTGATCCCTAAATTTCCACTTGGACAAATTTTGTTTGGGGGAAAATTTTCATTTGATCCCTAAATTTCAAAATGTTATAATTTTAGTTCTTAAATTTTGAGTTTGATTTCAATTTAGTCCCTAGGTTTCAAAATGATATAATTTTACCCTCGAGATTTGAGTTTTGTTTCAATTTGTCCCTAGGTTTCAAGATCTACACTTTTAACTTCAATGGTAAAATTATAACATTTTGAAAATTAAGGACTAAATTGAAACCAAATGCTAAACTCGAACTAAAAGAGTGACTTTTTGAATCCTACAAACCAAATAGAAATTAGACTTGAAACCTACGGACTAAGAAGATACTTTCTCCAAGCCTTTACTTAATGTGGGAGAATTTGACGTGGGTAGTTATAGATATACTCAATATCAAGTTTCTTTTATGTGTTGCAGATGCTGCAAAGTCCGGTGTTGCTCAAGAAACAATACAAAACACTGTTCGCAGAACAAGCAAAGTGATGACGGAGCAAGAAGCCAGGCAGATTCTCGGCGTCACCGAGGAAATGCCATGGGAGGAAGTTATGAAGGTCAAAATCCATTGATTTTCACTATAATATTTCTGGTCATTTATATATTATGAATAGGTTTTTGACAAACCTTCCTATTTGTGCAGAAATATGATGCTTTGTTTGAAAGGAATGCTCAAACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACAATCTATCAGAGCAAAGGTCAAGATGCCCCTAGCTGA

mRNA sequence

ATGGGCTCTAGCGGCTTTTACGATTCAGGACCTGTTCTCAAGGCCAGCCAATTAATCATGGCTGCAAAAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCAAGGGCTTTTGTTCAAGCCTATCGTCAAGCCATTGCAAATGCTGCAAAGTCCGGTGTTGCTCAAGAAACAATACAAAACACTGTTCGCAGAACAAGCAAAGTGATGACGGAGCAAGAAGCCAGGCAGATTCTCGGCGTCACCGAGGAAATGCCATGGGAGGAAGTTATGAAGAAATATGATGCTTTGTTTGAAAGGAATGCTCAAACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACAATCTATCAGAGCAAAGGTCAAGATGCCCCTAGCTGA

Coding sequence (CDS)

ATGGGCTCTAGCGGCTTTTACGATTCAGGACCTGTTCTCAAGGCCAGCCAATTAATCATGGCTGCAAAAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCAAGGGCTTTTGTTCAAGCCTATCGTCAAGCCATTGCAAATGCTGCAAAGTCCGGTGTTGCTCAAGAAACAATACAAAACACTGTTCGCAGAACAAGCAAAGTGATGACGGAGCAAGAAGCCAGGCAGATTCTCGGCGTCACCGAGGAAATGCCATGGGAGGAAGTTATGAAGAAATATGATGCTTTGTTTGAAAGGAATGCTCAAACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACAATCTATCAGAGCAAAGGTCAAGATGCCCCTAGCTGA

Protein sequence

MGSSGFYDSGPVLKASQLIMAAKILANLIVMGSGILARAFVQAYRQAIANAAKSGVAQETIQNTVRRTSKVMTEQEARQILGVTEEMPWEEVMKKYDALFERNAQTGSFYLQSKVHRAKERLETIYQSKGQDAPS

Homology

[Close]

BLAST of Bhi02G000197 vs. Swiss-Prot
Match: sp|Q93VV9|TM16B_ARATH (Mitochondrial import inner membrane translocase subunit PAM16 like 2 OS=Arabidopsis thaliana OX=3702 GN=PAM16L2 PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 6.0e-38
Identity = 81/116 (69.83%), Postives = 97/116 (83.62%), Query Frame = 0


Query: 20  MAAKILANLIVMGSGILARAFVQAYRQAIANAAKSGVAQETIQNTVRRTSKVMTEQEARQ 79
           MA ++LANLIVMGSGI+ RA  QAYRQA+ANA+KSGVAQE +QN VR+  K +TEQEARQ
Sbjct: 1   MAGRLLANLIVMGSGIIGRAVFQAYRQALANASKSGVAQEAMQNGVRQAGKAITEQEARQ 60

Query: 80  ILGVTEEMPWEEVMKKYDALFERNAQTGSFYLQSKVHRAKERLETIYQSKGQDAPS 136
           ILGVTE+  WEE+++KYD LFE NA+ GSFYLQSKVHRAKE LE +Y+S+G   PS
Sbjct: 61  ILGVTEKTSWEEILQKYDKLFENNAKAGSFYLQSKVHRAKECLEVVYRSQGNGTPS 116

[Close]

BLAST of Bhi02G000197 vs. Swiss-Prot
Match: sp|Q93W66|TM16A_ARATH (Mitochondrial import inner membrane translocase subunit PAM16 like 1 OS=Arabidopsis thaliana OX=3702 GN=PAM16L1 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.9e-31
Identity = 75/108 (69.44%), Postives = 90/108 (83.33%), Query Frame = 0


Query: 20  MAAKILANLIVMGSGILARAFVQAYRQAIANAAKSGVAQETIQNTVRRTSKVMTEQEARQ 79
           MAA++LA++IVMGSGI+ARA  QAYRQA+ANA+K+GVA E  Q T++R    + E EARQ
Sbjct: 1   MAARVLASVIVMGSGIIARACTQAYRQALANASKTGVAHEATQ-TIKR-GLTIGEAEARQ 60

Query: 80  ILGVTEEMPWEEVMKKYDALFERNAQTGSFYLQSKVHRAKERLETIYQ 128
           ILGVTE+  W+E++KKYD LFERNAQ GSFYLQSKVHRAKE LET YQ
Sbjct: 61  ILGVTEKSSWDEILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

[Close]

BLAST of Bhi02G000197 vs. Swiss-Prot
Match: sp|Q6PBL0|TIM16_DANRE (Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio OX=7955 GN=pam16 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.8e-11
Identity = 50/106 (47.17%), Postives = 66/106 (62.26%), Query Frame = 0


Query: 22  AKILANLIVMGSGILARAFVQAYRQ--AIANAAKSGVAQETIQNTVRRTSKVMTEQEARQ 81
           AK LA +IVMG+ ++ RAF +A RQ  A + AA     Q   Q+    +   MT QEA+Q
Sbjct: 2   AKYLAQIIVMGAQVVGRAFARALRQEFAASQAAAEARGQAGRQSAAASSFTGMTLQEAQQ 61

Query: 82  ILGVTEEMPWEEVMKKYDALFERN--AQTGSFYLQSKVHRAKERLE 124
           IL ++   P EE+ K Y+ LF+ N  A  GSFY+QSKV RAKERL+
Sbjct: 62  ILNISTLTP-EEIQKNYEHLFKVNDKAVGGSFYIQSKVVRAKERLD 106

[Close]

BLAST of Bhi02G000197 vs. Swiss-Prot
Match: sp|Q9CQV1|TIM16_MOUSE (Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus OX=10090 GN=Pam16 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.4e-10
Identity = 50/115 (43.48%), Postives = 70/115 (60.87%), Query Frame = 0


Query: 22  AKILANLIVMGSGILARAFVQAYRQ--AIANAAKSGVAQETIQNTVRRTSKVMTEQEARQ 81
           AK LA +IVMG  ++ RAF +A RQ  A + AA     +   Q+        ++ QEA+Q
Sbjct: 2   AKYLAQIIVMGVQVVGRAFARALRQEFAASQAAADARGRAGHQSAAASNLSGLSLQEAQQ 61

Query: 82  ILGVTEEMPWEEVMKKYDALFERNAQT--GSFYLQSKVHRAKERLETIYQSKGQD 133
           IL V++  P EEV K Y+ LF+ N ++  GSFYLQSKV RAKERL+   + + Q+
Sbjct: 62  ILNVSKLSP-EEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELRIQAQE 115

[Close]

BLAST of Bhi02G000197 vs. Swiss-Prot
Match: sp|Q9Y3D7|TIM16_HUMAN (Mitochondrial import inner membrane translocase subunit TIM16 OS=Homo sapiens OX=9606 GN=PAM16 PE=1 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 6.9e-10
Identity = 49/115 (42.61%), Postives = 70/115 (60.87%), Query Frame = 0


Query: 22  AKILANLIVMGSGILARAFVQAYRQ--AIANAAKSGVAQETIQNTVRRTSKVMTEQEARQ 81
           AK LA +IVMG  ++ RAF +A RQ  A + AA     +   ++        ++ QEA+Q
Sbjct: 2   AKYLAQIIVMGVQVVGRAFARALRQEFAASRAAADARGRAGHRSAAASNLSGLSLQEAQQ 61

Query: 82  ILGVTEEMPWEEVMKKYDALFERNAQT--GSFYLQSKVHRAKERLETIYQSKGQD 133
           IL V++  P EEV K Y+ LF+ N ++  GSFYLQSKV RAKERL+   + + Q+
Sbjct: 62  ILNVSKLSP-EEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELKIQAQE 115

[Close]

BLAST of Bhi02G000197 vs. TAIR10
Match: AT3G59280.1 (Protein Transporter, Pam16)

HSP 1 Score: 158.3 bits (399), Expect = 3.3e-39
Identity = 81/116 (69.83%), Postives = 97/116 (83.62%), Query Frame = 0


Query: 20  MAAKILANLIVMGSGILARAFVQAYRQAIANAAKSGVAQETIQNTVRRTSKVMTEQEARQ 79
           MA ++LANLIVMGSGI+ RA  QAYRQA+ANA+KSGVAQE +QN VR+  K +TEQEARQ
Sbjct: 1   MAGRLLANLIVMGSGIIGRAVFQAYRQALANASKSGVAQEAMQNGVRQAGKAITEQEARQ 60

Query: 80  ILGVTEEMPWEEVMKKYDALFERNAQTGSFYLQSKVHRAKERLETIYQSKGQDAPS 136
           ILGVTE+  WEE+++KYD LFE NA+ GSFYLQSKVHRAKE LE +Y+S+G   PS
Sbjct: 61  ILGVTEKTSWEEILQKYDKLFENNAKAGSFYLQSKVHRAKECLEVVYRSQGNGTPS 116

[Close]

BLAST of Bhi02G000197 vs. TAIR10
Match: AT5G61880.1 (Protein Transporter, Pam16)

HSP 1 Score: 136.7 bits (343), Expect = 1.0e-32
Identity = 75/108 (69.44%), Postives = 90/108 (83.33%), Query Frame = 0


Query: 20  MAAKILANLIVMGSGILARAFVQAYRQAIANAAKSGVAQETIQNTVRRTSKVMTEQEARQ 79
           MAA++LA++IVMGSGI+ARA  QAYRQA+ANA+K+GVA E  Q T++R    + E EARQ
Sbjct: 1   MAARVLASVIVMGSGIIARACTQAYRQALANASKTGVAHEATQ-TIKR-GLTIGEAEARQ 60

Query: 80  ILGVTEEMPWEEVMKKYDALFERNAQTGSFYLQSKVHRAKERLETIYQ 128
           ILGVTE+  W+E++KKYD LFERNAQ GSFYLQSKVHRAKE LET YQ
Sbjct: 61  ILGVTEKSSWDEILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

[Close]

BLAST of Bhi02G000197 vs. TrEMBL
Match: tr|A0A0A0LW69|A0A0A0LW69_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G185100 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.1e-49
Identity = 108/116 (93.10%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 20  MAAKILANLIVMGSGILARAFVQAYRQAIANAAKSGVAQETIQNTVRRTSKVMTEQEARQ 79
           MAAKILANLIVMGSGILARAFVQAYRQA+ANA+KSGVAQET+QNTVRR SKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60

Query: 80  ILGVTEEMPWEEVMKKYDALFERNAQTGSFYLQSKVHRAKERLETIYQSKGQDAPS 136
           ILGVTEE PWEEV KKYDALFERNAQTGSFYLQSKVHRAKERLET+YQ+KGQDAPS
Sbjct: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 116

[Close]

BLAST of Bhi02G000197 vs. TrEMBL
Match: tr|A0A1S3CJP3|A0A1S3CJP3_CUCME (mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo OX=3656 GN=LOC103501727 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.5e-49
Identity = 108/116 (93.10%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 20  MAAKILANLIVMGSGILARAFVQAYRQAIANAAKSGVAQETIQNTVRRTSKVMTEQEARQ 79
           MAAKILANLIVMGSGILARAFVQAYRQA+ANA+KSGVAQET+QNTVRR SKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60

Query: 80  ILGVTEEMPWEEVMKKYDALFERNAQTGSFYLQSKVHRAKERLETIYQSKGQDAPS 136
           ILGVTEE PWEEV+KKYDALFERNAQTGSFYLQSKVHRAKERLET+YQ KGQDAPS
Sbjct: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 116

[Close]

BLAST of Bhi02G000197 vs. TrEMBL
Match: tr|A0A1S3BV59|A0A1S3BV59_CUCME (mitochondrial import inner membrane translocase subunit tim16-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494012 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.2e-43
Identity = 96/116 (82.76%), Postives = 106/116 (91.38%), Query Frame = 0


Query: 20  MAAKILANLIVMGSGILARAFVQAYRQAIANAAKSGVAQETIQNTVRRTSKVMTEQEARQ 79
           MAAK+LA+LIV GS I+ RA  QAY+QA+ NA+KSGVAQETIQNTVRR SKVMTEQEARQ
Sbjct: 1   MAAKVLAHLIVSGSVIIGRAIAQAYQQALRNASKSGVAQETIQNTVRRASKVMTEQEARQ 60

Query: 80  ILGVTEEMPWEEVMKKYDALFERNAQTGSFYLQSKVHRAKERLETIYQSKGQDAPS 136
           ILGVTEEMPWEE++KKYD+LFERNAQTGSFYLQSKVHRAKERLET+Y SK QD PS
Sbjct: 61  ILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS 116

[Close]

BLAST of Bhi02G000197 vs. TrEMBL
Match: tr|A0A0A0LSD2|A0A0A0LSD2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G011490 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.7e-43
Identity = 96/116 (82.76%), Postives = 106/116 (91.38%), Query Frame = 0


Query: 20  MAAKILANLIVMGSGILARAFVQAYRQAIANAAKSGVAQETIQNTVRRTSKVMTEQEARQ 79
           MAAKILA+LIV GS ++ RA  QAY+QAI NA+ SGVAQETI+NTVRR SKVMTEQEARQ
Sbjct: 1   MAAKILAHLIVSGSVVIGRAVAQAYQQAIRNASNSGVAQETIRNTVRRASKVMTEQEARQ 60

Query: 80  ILGVTEEMPWEEVMKKYDALFERNAQTGSFYLQSKVHRAKERLETIYQSKGQDAPS 136
           ILGVTEEMPWEE++KKYDALFERNAQTGSFYLQSKVHRAKERLET++ SKGQD PS
Sbjct: 61  ILGVTEEMPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLHHSKGQDGPS 116

[Close]

BLAST of Bhi02G000197 vs. TrEMBL
Match: tr|A0A067LED2|A0A067LED2_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23812 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 7.8e-43
Identity = 95/116 (81.90%), Postives = 106/116 (91.38%), Query Frame = 0


Query: 20  MAAKILANLIVMGSGILARAFVQAYRQAIANAAKSGVAQETIQNTVRRTSKVMTEQEARQ 79
           MAAKILANLIVMGSGILARAFVQAYRQA+ANA+KSGVAQETIQNT+R+ SKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETIQNTIRKGSKVMTEQEARQ 60

Query: 80  ILGVTEEMPWEEVMKKYDALFERNAQTGSFYLQSKVHRAKERLETIYQSKGQDAPS 136
           ILGVTEE  WEE++KKYD LFERNA+ GSFYLQSKVHRAKE LE +++ KG+  PS
Sbjct: 61  ILGVTEETAWEEIVKKYDTLFERNAKNGSFYLQSKVHRAKECLEAVHRGKGEGTPS 116

[Close]

BLAST of Bhi02G000197 vs. NCBI nr
Match: XP_004139541.1 (PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis sativus] >XP_011655013.1 PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis sativus] >KGN65052.1 hypothetical protein Csa_1G185100 [Cucumis sativus])

HSP 1 Score: 204.9 bits (520), Expect = 1.7e-49
Identity = 108/116 (93.10%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 20  MAAKILANLIVMGSGILARAFVQAYRQAIANAAKSGVAQETIQNTVRRTSKVMTEQEARQ 79
           MAAKILANLIVMGSGILARAFVQAYRQA+ANA+KSGVAQET+QNTVRR SKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60

Query: 80  ILGVTEEMPWEEVMKKYDALFERNAQTGSFYLQSKVHRAKERLETIYQSKGQDAPS 136
           ILGVTEE PWEEV KKYDALFERNAQTGSFYLQSKVHRAKERLET+YQ+KGQDAPS
Sbjct: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 116

[Close]

BLAST of Bhi02G000197 vs. NCBI nr
Match: XP_008463624.1 (PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo] >XP_008463625.1 PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo] >XP_008463626.1 PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo])

HSP 1 Score: 204.5 bits (519), Expect = 2.2e-49
Identity = 108/116 (93.10%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 20  MAAKILANLIVMGSGILARAFVQAYRQAIANAAKSGVAQETIQNTVRRTSKVMTEQEARQ 79
           MAAKILANLIVMGSGILARAFVQAYRQA+ANA+KSGVAQET+QNTVRR SKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60

Query: 80  ILGVTEEMPWEEVMKKYDALFERNAQTGSFYLQSKVHRAKERLETIYQSKGQDAPS 136
           ILGVTEE PWEEV+KKYDALFERNAQTGSFYLQSKVHRAKERLET+YQ KGQDAPS
Sbjct: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 116

[Close]

BLAST of Bhi02G000197 vs. NCBI nr
Match: XP_022925423.1 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita moschata])

HSP 1 Score: 202.6 bits (514), Expect = 8.5e-49
Identity = 106/116 (91.38%), Postives = 112/116 (96.55%), Query Frame = 0


Query: 20  MAAKILANLIVMGSGILARAFVQAYRQAIANAAKSGVAQETIQNTVRRTSKVMTEQEARQ 79
           MAAKILANLIVMGSGILARAFVQAYRQA+ NA+KSGVAQETIQNTVRR SKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 60

Query: 80  ILGVTEEMPWEEVMKKYDALFERNAQTGSFYLQSKVHRAKERLETIYQSKGQDAPS 136
           ILGVT E PWEE++KKYDALFE+NAQTGSFYLQSKVHRAKERLET+YQSKGQDAPS
Sbjct: 61  ILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]

BLAST of Bhi02G000197 vs. NCBI nr
Match: XP_022963881.1 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita moschata])

HSP 1 Score: 201.8 bits (512), Expect = 1.4e-48
Identity = 105/116 (90.52%), Postives = 112/116 (96.55%), Query Frame = 0


Query: 20  MAAKILANLIVMGSGILARAFVQAYRQAIANAAKSGVAQETIQNTVRRTSKVMTEQEARQ 79
           MAAKILANLIVMGSGILARAFVQAYRQA+ NA+KSGVAQETIQN+VRR SKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60

Query: 80  ILGVTEEMPWEEVMKKYDALFERNAQTGSFYLQSKVHRAKERLETIYQSKGQDAPS 136
           ILG+T E PWEE++KKYDALFERNAQTGSFYLQSKVHRAKERLET+YQSKGQDAPS
Sbjct: 61  ILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]

BLAST of Bhi02G000197 vs. NCBI nr
Match: XP_022155245.1 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Momordica charantia] >XP_022155246.1 mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Momordica charantia])

HSP 1 Score: 201.4 bits (511), Expect = 1.9e-48
Identity = 106/116 (91.38%), Postives = 111/116 (95.69%), Query Frame = 0


Query: 20  MAAKILANLIVMGSGILARAFVQAYRQAIANAAKSGVAQETIQNTVRRTSKVMTEQEARQ 79
           MAAKILANLIVMGSGILARAFVQAYRQA+ANA+KSGVAQETIQNTVRR SKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETIQNTVRRASKVMTEQEARQ 60

Query: 80  ILGVTEEMPWEEVMKKYDALFERNAQTGSFYLQSKVHRAKERLETIYQSKGQDAPS 136
           ILGVTEE PWEE++KKYD LFERNAQ GSFYLQSKVHRAKERLET+YQSK QDAPS
Sbjct: 61  ILGVTEETPWEEIVKKYDTLFERNAQNGSFYLQSKVHRAKERLETLYQSKDQDAPS 116

The following BLAST results are available for this feature:

BLAST of Bhi02G000197 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q93VV9\|TM16B_ARATH	6.0e-38	69.83	Mitochondrial import inner membrane translocase subunit PAM16 like 2 OS=Arabidop...	[more]
sp\|Q93W66\|TM16A_ARATH	1.9e-31	69.44	Mitochondrial import inner membrane translocase subunit PAM16 like 1 OS=Arabidop...	[more]
sp\|Q6PBL0\|TIM16_DANRE	4.8e-11	47.17	Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio OX=...	[more]
sp\|Q9CQV1\|TIM16_MOUSE	2.4e-10	43.48	Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus OX...	[more]
sp\|Q9Y3D7\|TIM16_HUMAN	6.9e-10	42.61	Mitochondrial import inner membrane translocase subunit TIM16 OS=Homo sapiens OX...	[more]

BLAST of Bhi02G000197 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G59280.1	3.3e-39	69.83	Protein Transporter, Pam16	[more]
AT5G61880.1	1.0e-32	69.44	Protein Transporter, Pam16	[more]

BLAST of Bhi02G000197 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LW69\|A0A0A0LW69_CUCSA	1.1e-49	93.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G185100 PE=4 SV=1	[more]
tr\|A0A1S3CJP3\|A0A1S3CJP3_CUCME	1.5e-49	93.10	mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo OX...	[more]
tr\|A0A1S3BV59\|A0A1S3BV59_CUCME	1.2e-43	82.76	mitochondrial import inner membrane translocase subunit tim16-like isoform X1 OS...	[more]
tr\|A0A0A0LSD2\|A0A0A0LSD2_CUCSA	2.7e-43	82.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G011490 PE=4 SV=1	[more]
tr\|A0A067LED2\|A0A067LED2_JATCU	7.8e-43	81.90	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23812 PE=4 SV=1	[more]

BLAST of Bhi02G000197 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139541.1	1.7e-49	93.10	PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumi...	[more]
XP_008463624.1	2.2e-49	93.10	PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumi...	[more]
XP_022925423.1	8.5e-49	91.38	mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucur...	[more]
XP_022963881.1	1.4e-48	90.52	mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucur...	[more]
XP_022155245.1	1.9e-48	91.38	mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Momor...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005744	mitochondrial inner membrane presequence translocase complex

Vocabulary: **Biological Process**
Term	Definition
GO:0030150	protein import into mitochondrial matrix

Vocabulary: **INTERPRO**
Term	Definition
IPR005341	Tim16
IPR036869	J_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030150	protein import into mitochondrial matrix
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005744	mitochondrial inner membrane presequence translocase complex
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi02M000197	Bhi02M000197	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036869	Chaperone J-domain superfamily	GENE3D	G3DSA:1.10.287.110		coord: 72..130 e-value: 2.9E-18 score: 67.0
None	No IPR available	PFAM	PF03656	Pam16	coord: 20..130 e-value: 3.4E-23 score: 82.0
None	No IPR available	PANTHER	PTHR12388:SF2	SUBFAMILY NOT NAMED	coord: 20..128
IPR005341	Mitochondrial import inner membrane translocase subunit Tim16	PANTHER	PTHR12388	MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULE	coord: 20..128

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi02G000197	Csa1G011490	Cucumber (Chinese Long) v2	cuwgoB095
Bhi02G000197	MELO3C017198	Melon (DHL92) v3.5.1	mewgoB291
Bhi02G000197	ClCG06G015930	Watermelon (Charleston Gray)	wcgwgoB541
Bhi02G000197	CSPI01G02560	Wild cucumber (PI 183967)	cpiwgoB098
Bhi02G000197	Cucsa.197950	Cucumber (Gy14) v1	cgywgoB417
Bhi02G000197	CsGy1G002590	Cucumber (Gy14) v2	cgybwgoB092
Bhi02G000197	MELO3C017198.2	Melon (DHL92) v3.6.1	medwgoB291
Bhi02G000197	CsaV3_1G002620	Cucumber (Chinese Long) v3	cucwgoB103
Bhi02G000197	Cla019087	Watermelon (97103) v1	wgowmB678
Bhi02G000197	Cla97C06G125510	Watermelon (97103) v2	wgowmbB649

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi02G000197	Wax gourd	wgowgoB121
Bhi02G000197	Wax gourd	wgowgoB125
Bhi02G000197	Cucumber (Gy14) v1	cgywgoB188
Bhi02G000197	Cucumber (Gy14) v1	cgywgoB585
Bhi02G000197	Cucumber (Gy14) v2	cgybwgoB107
Bhi02G000197	Cucurbita maxima (Rimu)	cmawgoB0088
Bhi02G000197	Cucurbita maxima (Rimu)	cmawgoB0151
Bhi02G000197	Cucurbita maxima (Rimu)	cmawgoB0631
Bhi02G000197	Cucurbita maxima (Rimu)	cmawgoB0916
Bhi02G000197	Cucurbita moschata (Rifu)	cmowgoB0081
Bhi02G000197	Cucurbita moschata (Rifu)	cmowgoB0160
Bhi02G000197	Cucurbita moschata (Rifu)	cmowgoB0631
Bhi02G000197	Cucurbita pepo (Zucchini)	cpewgoB0737
Bhi02G000197	Cucurbita moschata (Rifu)	cmowgoB0917
Bhi02G000197	Cucurbita pepo (Zucchini)	cpewgoB0062
Bhi02G000197	Cucurbita pepo (Zucchini)	cpewgoB0459
Bhi02G000197	Cucurbita pepo (Zucchini)	cpewgoB0581
Bhi02G000197	Cucurbita pepo (Zucchini)	cpewgoB0883
Bhi02G000197	Wild cucumber (PI 183967)	cpiwgoB116
Bhi02G000197	Wild cucumber (PI 183967)	cpiwgoB528
Bhi02G000197	Cucumber (Chinese Long) v3	cucwgoB121
Bhi02G000197	Cucumber (Chinese Long) v3	cucwgoB125
Bhi02G000197	Cucumber (Chinese Long) v3	cucwgoB537
Bhi02G000197	Cucumber (Chinese Long) v2	cuwgoB115
Bhi02G000197	Cucumber (Chinese Long) v2	cuwgoB525
Bhi02G000197	Bottle gourd (USVL1VR-Ls)	lsiwgoB291
Bhi02G000197	Bottle gourd (USVL1VR-Ls)	lsiwgoB408
Bhi02G000197	Bottle gourd (USVL1VR-Ls)	lsiwgoB501
Bhi02G000197	Melon (DHL92) v3.6.1	medwgoB090
Bhi02G000197	Melon (DHL92) v3.6.1	medwgoB194
Bhi02G000197	Melon (DHL92) v3.5.1	mewgoB089
Bhi02G000197	Melon (DHL92) v3.5.1	mewgoB192
Bhi02G000197	Watermelon (Charleston Gray)	wcgwgoB407
Bhi02G000197	Watermelon (Charleston Gray)	wcgwgoB487
Bhi02G000197	Watermelon (97103) v2	wgowmbB644
Bhi02G000197	Watermelon (97103) v2	wgowmbB647
Bhi02G000197	Watermelon (97103) v1	wgowmB671
Bhi02G000197	Watermelon (97103) v1	wgowmB666
Bhi02G000197	Silver-seed gourd	carwgoB0063
Bhi02G000197	Silver-seed gourd	carwgoB0562