Bhi01G002804 (gene) Wax gourd

NameBhi01G002804
Typegene
OrganismBenincasa hispida (Wax gourd)
Descriptionprotein FAR1-RELATED SEQUENCE 6-like
Locationchr1 : 91621090 .. 91621529 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCGGCGGCGGCAGCAGCAGCAGAAGAAGAAGAAGATTATGAGCCAGTATACCTAAAAACTTCACTCCTCAAAGGTCAGGCGCTTTGTAGATTTCTTCCTCCCTTTTTTTGATCTAGGGTAGAATGGATGAAGTTTCTCTCAACACTGAGCCAATGGGCGATGAGGAGGGGGATTATTTTGATATCAAAGGGAATTCTGTAATTGTAGATTATGTTGATCAAAGTGGGGTATTTGAAGGAGAAAATACCCTTCCTCCTACCGTTTGTATGGAGTTTGAGTTTTATGAGGATGTGTACTACTTTTATAGTTGCTATGCAAAAGAACAGGGCTTTGGAGTCCGAGTTAGTAACACTTGGTATAGGAAGAGTAAGGAAAGGGACAGAGGAAAACTTAGCTGTAGCAGTGCAGGTTTCAAGAAGAGTGAAGCAAACTGA

mRNA sequence

ATGGCGGCGGCGGCGGCAGCAGCAGCAGAAGAAGAAGAAGATTATGAGCCAGGTAGAATGGATGAAGTTTCTCTCAACACTGAGCCAATGGGCGATGAGGAGGGGGATTATTTTGATATCAAAGGGAATTCTGTAATTGTAGATTATGTTGATCAAAGTGGGGTATTTGAAGGAGAAAATACCCTTCCTCCTACCGTTTGTATGGAGTTTGAGTTTTATGAGGATGTGTACTACTTTTATAGTTGCTATGCAAAAGAACAGGGCTTTGGAGTCCGAGTTAGTAACACTTGGTATAGGAAGAGTAAGGAAAGGGACAGAGGAAAACTTAGCTGTAGCAGTGCAGGTTTCAAGAAGAGTGAAGCAAACTGA

Coding sequence (CDS)

ATGGCGGCGGCGGCGGCAGCAGCAGCAGAAGAAGAAGAAGATTATGAGCCAGGTAGAATGGATGAAGTTTCTCTCAACACTGAGCCAATGGGCGATGAGGAGGGGGATTATTTTGATATCAAAGGGAATTCTGTAATTGTAGATTATGTTGATCAAAGTGGGGTATTTGAAGGAGAAAATACCCTTCCTCCTACCGTTTGTATGGAGTTTGAGTTTTATGAGGATGTGTACTACTTTTATAGTTGCTATGCAAAAGAACAGGGCTTTGGAGTCCGAGTTAGTAACACTTGGTATAGGAAGAGTAAGGAAAGGGACAGAGGAAAACTTAGCTGTAGCAGTGCAGGTTTCAAGAAGAGTGAAGCAAACTGA

Protein sequence

MAAAAAAAAEEEEDYEPGRMDEVSLNTEPMGDEEGDYFDIKGNSVIVDYVDQSGVFEGENTLPPTVCMEFEFYEDVYYFYSCYAKEQGFGVRVSNTWYRKSKERDRGKLSCSSAGFKKSEAN
BLAST of Bhi01G002804 vs. TAIR10
Match: AT1G52520.1 (FAR1-related sequence 6)

HSP 1 Score: 66.2 bits (160), Expect = 1.6e-11
Identity = 37/71 (52.11%), Postives = 47/71 (66.20%), Query Frame = 0

Query: 51  DQSG--VFEGENTLPPTVCMEFEFYEDVYYFYSCYAKEQGFGVRVSNTWY-RKSKERDRG 110
           +QSG  V E +    P V MEFE Y+D Y +Y+CYA E GF VRV N+W+ R+SKE+   
Sbjct: 70  EQSGLLVDERKEFDAPAVGMEFESYDDAYNYYNCYASEVGFRVRVKNSWFKRRSKEKYGA 129

Query: 111 KLSCSSAGFKK 119
            L CSS GFK+
Sbjct: 130 VLCCSSQGFKR 140

BLAST of Bhi01G002804 vs. TAIR10
Match: AT1G80010.1 (FAR1-related sequence 8)

HSP 1 Score: 58.2 bits (139), Expect = 4.2e-09
Identity = 29/56 (51.79%), Postives = 37/56 (66.07%), Query Frame = 0

Query: 63  PPTVCMEFEFYEDVYYFYSCYAKEQGFGVRVSNTW-YRKSKERDRGKLSCSSAGFK 118
           PPT  MEFE Y+D Y FY+ YA+E GF +RV ++W  R SKE+    L C+  GFK
Sbjct: 94  PPTPGMEFESYDDAYSFYNSYARELGFAIRVKSSWTKRNSKEKRGAVLCCNCQGFK 149

BLAST of Bhi01G002804 vs. Swiss-Prot
Match: sp|Q9SSQ4|FRS6_ARATH (Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=FRS6 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.8e-10
Identity = 37/71 (52.11%), Postives = 47/71 (66.20%), Query Frame = 0

Query: 51  DQSG--VFEGENTLPPTVCMEFEFYEDVYYFYSCYAKEQGFGVRVSNTWY-RKSKERDRG 110
           +QSG  V E +    P V MEFE Y+D Y +Y+CYA E GF VRV N+W+ R+SKE+   
Sbjct: 70  EQSGLLVDERKEFDAPAVGMEFESYDDAYNYYNCYASEVGFRVRVKNSWFKRRSKEKYGA 129

Query: 111 KLSCSSAGFKK 119
            L CSS GFK+
Sbjct: 130 VLCCSSQGFKR 140

BLAST of Bhi01G002804 vs. Swiss-Prot
Match: sp|Q9S793|FRS8_ARATH (Protein FAR1-RELATED SEQUENCE 8 OS=Arabidopsis thaliana OX=3702 GN=FRS8 PE=2 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 7.6e-08
Identity = 29/56 (51.79%), Postives = 37/56 (66.07%), Query Frame = 0

Query: 63  PPTVCMEFEFYEDVYYFYSCYAKEQGFGVRVSNTW-YRKSKERDRGKLSCSSAGFK 118
           PPT  MEFE Y+D Y FY+ YA+E GF +RV ++W  R SKE+    L C+  GFK
Sbjct: 94  PPTPGMEFESYDDAYSFYNSYARELGFAIRVKSSWTKRNSKEKRGAVLCCNCQGFK 149

BLAST of Bhi01G002804 vs. TrEMBL
Match: tr|A0A0A0KVM3|A0A0A0KVM3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006410 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 7.1e-43
Identity = 90/104 (86.54%), Postives = 96/104 (92.31%), Query Frame = 0

Query: 20  MDEVSLNTEPMGDEEGDYFDIKGNSVIVDYVDQSGVFEGENTLPPTVCMEFEFYEDVYYF 79
           MD VSLNTEP+GDEEGDYF+I+G+SVI DYVDQSG+FEGEN LPP V MEFE YEDVYYF
Sbjct: 1   MDGVSLNTEPVGDEEGDYFEIEGDSVIADYVDQSGIFEGENPLPPAVGMEFESYEDVYYF 60

Query: 80  YSCYAKEQGFGVRVSNTWYRKSKERDRGKLSCSSAGF-KKSEAN 123
           YSCYAKEQGFGVRVSNTWYRKSKE+ RGKLSCSSAGF KKSEAN
Sbjct: 61  YSCYAKEQGFGVRVSNTWYRKSKEKYRGKLSCSSAGFKKKSEAN 104

BLAST of Bhi01G002804 vs. TrEMBL
Match: tr|A0A1S3BYS6|A0A1S3BYS6_CUCME (protein FAR1-RELATED SEQUENCE 6-like OS=Cucumis melo OX=3656 GN=LOC103494662 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.3e-41
Identity = 87/104 (83.65%), Postives = 95/104 (91.35%), Query Frame = 0

Query: 20  MDEVSLNTEPMGDEEGDYFDIKGNSVIVDYVDQSGVFEGENTLPPTVCMEFEFYEDVYYF 79
           MD VSLNTEP+G+EEGDYF+I+G+S I DYVDQ+G+FEGEN LPP V MEFE YEDVYYF
Sbjct: 1   MDGVSLNTEPVGEEEGDYFEIEGDSEIADYVDQNGIFEGENPLPPAVGMEFESYEDVYYF 60

Query: 80  YSCYAKEQGFGVRVSNTWYRKSKERDRGKLSCSSAGF-KKSEAN 123
           YSCYAKEQGFGVRVSNTWYRKSKE+ RGKLSCSSAGF KKSEAN
Sbjct: 61  YSCYAKEQGFGVRVSNTWYRKSKEKYRGKLSCSSAGFKKKSEAN 104

BLAST of Bhi01G002804 vs. TrEMBL
Match: tr|A0A2I4DIH0|A0A2I4DIH0_9ROSI (protein FAR1-RELATED SEQUENCE 6-like OS=Juglans regia OX=51240 GN=LOC108980465 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.0e-37
Identity = 79/104 (75.96%), Postives = 93/104 (89.42%), Query Frame = 0

Query: 20  MDEVSLNTEPMGDEEGDYFDIKGNSVIVDYVDQSGVFEGENTLPPTVCMEFEFYEDVYYF 79
           MDEVSLN+EP+GD++ D F+I+G+S +++YV Q+G+ +GEN LPP V MEFE YEDVYYF
Sbjct: 1   MDEVSLNSEPVGDDDADEFEIEGDSSMIEYVGQTGIIQGENPLPPVVGMEFESYEDVYYF 60

Query: 80  YSCYAKEQGFGVRVSNTWYRKSKERDRGKLSCSSAGF-KKSEAN 123
           Y+CYAKEQGFGVRVSNTWYRKSKER RGKLSCSSAGF KKSEAN
Sbjct: 61  YNCYAKEQGFGVRVSNTWYRKSKERYRGKLSCSSAGFKKKSEAN 104

BLAST of Bhi01G002804 vs. TrEMBL
Match: tr|A0A067KLN6|A0A067KLN6_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06113 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 5.8e-37
Identity = 79/104 (75.96%), Postives = 92/104 (88.46%), Query Frame = 0

Query: 20  MDEVSLNTEPMGDEEGDYFDIKGNSVIVDYVDQSGVFEGENTLPPTVCMEFEFYEDVYYF 79
           MDEVSLNTEP+G+++ D F+I+G+  + +YV Q+GV +GEN LPP+V MEFE YEDVYYF
Sbjct: 1   MDEVSLNTEPVGEDDADEFEIEGDCAMAEYVGQTGVIQGENPLPPSVGMEFESYEDVYYF 60

Query: 80  YSCYAKEQGFGVRVSNTWYRKSKERDRGKLSCSSAGF-KKSEAN 123
           Y+CYAKEQGFGVRVSNTWYRKSKER RGKLSCSSAGF KKSEAN
Sbjct: 61  YNCYAKEQGFGVRVSNTWYRKSKERYRGKLSCSSAGFKKKSEAN 104

BLAST of Bhi01G002804 vs. TrEMBL
Match: tr|M5WRA1|M5WRA1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G090300 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.9e-36
Identity = 76/104 (73.08%), Postives = 90/104 (86.54%), Query Frame = 0

Query: 20  MDEVSLNTEPMGDEEGDYFDIKGNSVIVDYVDQSGVFEGENTLPPTVCMEFEFYEDVYYF 79
           MDEVSLNTEP GD++ D F+I+G+  + D++ Q+G+ +GEN LPP V MEF+ YEDVYYF
Sbjct: 1   MDEVSLNTEPAGDDDADEFEIEGDCAMTDFISQTGIIQGENPLPPVVGMEFDSYEDVYYF 60

Query: 80  YSCYAKEQGFGVRVSNTWYRKSKERDRGKLSCSSAGF-KKSEAN 123
           Y+CYAK+QGFGVRVSNTWYRKSKER RGKLSCSSAGF KKSEAN
Sbjct: 61  YNCYAKQQGFGVRVSNTWYRKSKERYRGKLSCSSAGFKKKSEAN 104

BLAST of Bhi01G002804 vs. NCBI nr
Match: XP_011652996.1 (PREDICTED: protein FAR1-RELATED SEQUENCE 6 [Cucumis sativus] >KGN52934.1 hypothetical protein Csa_4G006410 [Cucumis sativus])

HSP 1 Score: 182.2 bits (461), Expect = 1.1e-42
Identity = 90/104 (86.54%), Postives = 96/104 (92.31%), Query Frame = 0

Query: 20  MDEVSLNTEPMGDEEGDYFDIKGNSVIVDYVDQSGVFEGENTLPPTVCMEFEFYEDVYYF 79
           MD VSLNTEP+GDEEGDYF+I+G+SVI DYVDQSG+FEGEN LPP V MEFE YEDVYYF
Sbjct: 1   MDGVSLNTEPVGDEEGDYFEIEGDSVIADYVDQSGIFEGENPLPPAVGMEFESYEDVYYF 60

Query: 80  YSCYAKEQGFGVRVSNTWYRKSKERDRGKLSCSSAGF-KKSEAN 123
           YSCYAKEQGFGVRVSNTWYRKSKE+ RGKLSCSSAGF KKSEAN
Sbjct: 61  YSCYAKEQGFGVRVSNTWYRKSKEKYRGKLSCSSAGFKKKSEAN 104

BLAST of Bhi01G002804 vs. NCBI nr
Match: XP_008454179.1 (PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Cucumis melo] >XP_008454180.1 PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Cucumis melo])

HSP 1 Score: 177.2 bits (448), Expect = 3.4e-41
Identity = 87/104 (83.65%), Postives = 95/104 (91.35%), Query Frame = 0

Query: 20  MDEVSLNTEPMGDEEGDYFDIKGNSVIVDYVDQSGVFEGENTLPPTVCMEFEFYEDVYYF 79
           MD VSLNTEP+G+EEGDYF+I+G+S I DYVDQ+G+FEGEN LPP V MEFE YEDVYYF
Sbjct: 1   MDGVSLNTEPVGEEEGDYFEIEGDSEIADYVDQNGIFEGENPLPPAVGMEFESYEDVYYF 60

Query: 80  YSCYAKEQGFGVRVSNTWYRKSKERDRGKLSCSSAGF-KKSEAN 123
           YSCYAKEQGFGVRVSNTWYRKSKE+ RGKLSCSSAGF KKSEAN
Sbjct: 61  YSCYAKEQGFGVRVSNTWYRKSKEKYRGKLSCSSAGFKKKSEAN 104

BLAST of Bhi01G002804 vs. NCBI nr
Match: XP_022948397.1 (protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 176.0 bits (445), Expect = 7.7e-41
Identity = 86/104 (82.69%), Postives = 95/104 (91.35%), Query Frame = 0

Query: 20  MDEVSLNTEPMGDEEGDYFDIKGNSVIVDYVDQSGVFEGENTLPPTVCMEFEFYEDVYYF 79
           MD VSLNT+P+GDEE DYF+I+G+SV+ DYVDQ+G+F+GEN LPP V MEFE YEDVYYF
Sbjct: 1   MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTGMFQGENPLPPAVGMEFESYEDVYYF 60

Query: 80  YSCYAKEQGFGVRVSNTWYRKSKERDRGKLSCSSAGF-KKSEAN 123
           YSCYAKEQGFGVRVSNTWYRKSKER RGKLSCSSAGF KKSEAN
Sbjct: 61  YSCYAKEQGFGVRVSNTWYRKSKERYRGKLSCSSAGFKKKSEAN 104

BLAST of Bhi01G002804 vs. NCBI nr
Match: XP_022998133.1 (protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 176.0 bits (445), Expect = 7.7e-41
Identity = 86/104 (82.69%), Postives = 95/104 (91.35%), Query Frame = 0

Query: 20  MDEVSLNTEPMGDEEGDYFDIKGNSVIVDYVDQSGVFEGENTLPPTVCMEFEFYEDVYYF 79
           MD VSLNT+P+GDEE DYF+I+G+SV+ DYVDQ+G+F+GEN LPP V MEFE YEDVYYF
Sbjct: 1   MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTGMFQGENPLPPAVGMEFESYEDVYYF 60

Query: 80  YSCYAKEQGFGVRVSNTWYRKSKERDRGKLSCSSAGF-KKSEAN 123
           YSCYAKEQGFGVRVSNTWYRKSKER RGKLSCSSAGF KKSEAN
Sbjct: 61  YSCYAKEQGFGVRVSNTWYRKSKERYRGKLSCSSAGFKKKSEAN 104

BLAST of Bhi01G002804 vs. NCBI nr
Match: XP_023523301.1 (protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023523302.1 protein FAR1-RELATED SEQUENCE 6-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176.0 bits (445), Expect = 7.7e-41
Identity = 86/104 (82.69%), Postives = 95/104 (91.35%), Query Frame = 0

Query: 20  MDEVSLNTEPMGDEEGDYFDIKGNSVIVDYVDQSGVFEGENTLPPTVCMEFEFYEDVYYF 79
           MD VSLNT+P+GDEE DYF+I+G+SV+ DYVDQ+G+F+GEN LPP V MEFE YEDVYYF
Sbjct: 1   MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTGMFQGENPLPPAVGMEFESYEDVYYF 60

Query: 80  YSCYAKEQGFGVRVSNTWYRKSKERDRGKLSCSSAGF-KKSEAN 123
           YSCYAKEQGFGVRVSNTWYRKSKER RGKLSCSSAGF KKSEAN
Sbjct: 61  YSCYAKEQGFGVRVSNTWYRKSKERYRGKLSCSSAGFKKKSEAN 104

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G52520.11.6e-1152.11FAR1-related sequence 6[more]
AT1G80010.14.2e-0951.79FAR1-related sequence 8[more]
Match NameE-valueIdentityDescription
sp|Q9SSQ4|FRS6_ARATH2.8e-1052.11Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=FRS6 PE=2 SV=... [more]
sp|Q9S793|FRS8_ARATH7.6e-0851.79Protein FAR1-RELATED SEQUENCE 8 OS=Arabidopsis thaliana OX=3702 GN=FRS8 PE=2 SV=... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0KVM3|A0A0A0KVM3_CUCSA7.1e-4386.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006410 PE=4 SV=1[more]
tr|A0A1S3BYS6|A0A1S3BYS6_CUCME2.3e-4183.65protein FAR1-RELATED SEQUENCE 6-like OS=Cucumis melo OX=3656 GN=LOC103494662 PE=... [more]
tr|A0A2I4DIH0|A0A2I4DIH0_9ROSI2.0e-3775.96protein FAR1-RELATED SEQUENCE 6-like OS=Juglans regia OX=51240 GN=LOC108980465 P... [more]
tr|A0A067KLN6|A0A067KLN6_JATCU5.8e-3775.96Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06113 PE=4 SV=1[more]
tr|M5WRA1|M5WRA1_PRUPE2.9e-3673.08Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G090300 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_011652996.11.1e-4286.54PREDICTED: protein FAR1-RELATED SEQUENCE 6 [Cucumis sativus] >KGN52934.1 hypothe... [more]
XP_008454179.13.4e-4183.65PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Cucumis melo] >XP_008454180.1 P... [more]
XP_022948397.17.7e-4182.69protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita moschata][more]
XP_022998133.17.7e-4182.69protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita maxima][more]
XP_023523301.17.7e-4182.69protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita pepo subsp. pepo] >XP... [more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR031052FHY3/FAR1
IPR004330FAR1_DNA_bnd_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M002804Bhi01M002804mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004330FAR1 DNA binding domainPFAMPF03101FAR1coord: 79..120
e-value: 1.8E-5
score: 25.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..122
NoneNo IPR availablePANTHERPTHR31669:SF15SUBFAMILY NOT NAMEDcoord: 17..121
IPR031052FHY3/FAR1 familyPANTHERPTHR31669FAMILY NOT NAMEDcoord: 17..121