Bhi01G002096 (gene) Wax gourd

Overview
NameBhi01G002096
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr1 : 66432596 .. 66432820 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGACCATTATACGTTGGCAGAAAGCAAGGCATTGTGTAGACAAACAAAACAAGGAGAGAATACCAGTGAAGTCACTCACCAGGAAACACAGAAGAGGGGAAAGGAAAGAAACCCTAGAACAGAAAGCGCATGATGGAGAAATGGGTGAGGGGATGTGGAAGCTTTTTGGCCATGGAGGTGGGAGGTTGAAGGGGAAGAAGGTCGCCGGCGGAAGCGGTTGA

mRNA sequence

ATGGGGACCATTATACGTTGGCAGAAAGCAAGGCATTGTGTAGACAAACAAAACAAGGAGAGAATACCAGTGAAGTCACTCACCAGGAAACACAGAAGAGGGGAAAGGAAAGAAACCCTAGAACAGAAAGCGCATGATGGAGAAATGGGTGAGGGGATGTGGAAGCTTTTTGGCCATGGAGGTGGGAGGTTGAAGGGGAAGAAGGTCGCCGGCGGAAGCGGTTGA

Coding sequence (CDS)

ATGGGGACCATTATACGTTGGCAGAAAGCAAGGCATTGTGTAGACAAACAAAACAAGGAGAGAATACCAGTGAAGTCACTCACCAGGAAACACAGAAGAGGGGAAAGGAAAGAAACCCTAGAACAGAAAGCGCATGATGGAGAAATGGGTGAGGGGATGTGGAAGCTTTTTGGCCATGGAGGTGGGAGGTTGAAGGGGAAGAAGGTCGCCGGCGGAAGCGGTTGA

Protein sequence

MGTIIRWQKARHCVDKQNKERIPVKSLTRKHRRGERKETLEQKAHDGEMGEGMWKLFGHGGGRLKGKKVAGGSG
Homology
[Close]
BLAST of Bhi01G002096 vs. TrEMBL
Match: tr|A0A0A0KU78|A0A0A0KU78_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G015730 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.6e-05
Identity = 35/68 (51.47%), Postives = 42/68 (61.76%), Query Frame = 0 

Query: 5   IRWQKARHCVDKQNKERIPVKSLTRKHRRG-ERKETLEQKAHDGEMGEGMWKLFGHGGGR 64
           I ++K  H   + + E  P     R  R+G ERK TLEQK HDGE GEG+ KL G GG R
Sbjct: 58  IPFRKIGHSKARPDNELDPKTKQRRGERKGKERKGTLEQKVHDGETGEGILKLCGRGGRR 117

Query: 65  LKGKKVAG 72
           L GKK+AG
Sbjct: 118 LMGKKIAG 125

[Close]
BLAST of Bhi01G002096 vs. NCBI nr
Match: KGN53083.1 (hypothetical protein Csa_4G015730 [Cucumis sativus])

HSP 1 Score: 56.2 bits (134), Expect = 5.4e-05
Identity = 35/68 (51.47%), Postives = 42/68 (61.76%), Query Frame = 0 

Query: 5   IRWQKARHCVDKQNKERIPVKSLTRKHRRG-ERKETLEQKAHDGEMGEGMWKLFGHGGGR 64
           I ++K  H   + + E  P     R  R+G ERK TLEQK HDGE GEG+ KL G GG R
Sbjct: 58  IPFRKIGHSKARPDNELDPKTKQRRGERKGKERKGTLEQKVHDGETGEGILKLCGRGGRR 117

Query: 65  LKGKKVAG 72
           L GKK+AG
Sbjct: 118 LMGKKIAG 125

The following BLAST results are available for this feature:
BLAST of Bhi01G002096 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi01G002096 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi01G002096 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KU78|A0A0A0KU78_CUCSA3.6e-0551.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G015730 PE=4 SV=1[more]
BLAST of Bhi01G002096 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53083.15.4e-0551.47hypothetical protein Csa_4G015730 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M002096Bhi01M002096mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..50