Bhi01G001480 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi01G001480
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr1 : 42887325 .. 42888082 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAGACCCACCAAAATTCAATACCTTCCCATTAAACCTCATCTTTCTCTCTTCACCCTCACTCATCTCTCCGTTGGACTTTCTTCTTCAAACACCATGGCTGCACTGGCCACACCATCAATGGCAGCCATCATTCCTCTTCTTCTCCTCCTCATTCCTACCGGCTCCACCCTCAACGACACTGCTTGCGACGGCAGGCACCCGGAGAAATGCCACCTCGTCCGAGACAAGATCGCCGATTCCGAATTCATGATGGAATCCGAGATCGGACGGATGCTGTTGGACTTCAATAAATTCCAAACCCATCAAACCCAAACCCCCAACCAACCATCGGTGTCGTCCTGCGGTCGACCACCACGGTACGACAGTTGTGTTGGGGAGAAAAGGCAAACGCCGCCACAGGAAAAATGCGACATCTTCAAACGAGTGCCTTGTGGACAATGAAAGGGGAAAAAAACCAAGAAAAGGAAGATTGATATGTGGTTATAATTTTTCGGACGTGTCGTTAAATGGTGAATTTGGTTGTTGTGTTGTTCACTGAAAGAAAATAAAAATGTCTTGTGTAGTTGTGTGCTTAATTATAAATCATTTTTTTACTTTATGTTTTTTTTAAGGAATTTTACTCTCTATGTTTTGTTGCTGTTAATGAGGTTGGTTTTGTACATGTTTGTGGTTTGATTTTGTCCTAAGTTTCAGTAATATTACTCTGGAGTTACCATCAATGTTTATTAGAATGTTGAACGAAATTAAAAACCAGC

mRNA sequence

CAAAGACCCACCAAAATTCAATACCTTCCCATTAAACCTCATCTTTCTCTCTTCACCCTCACTCATCTCTCCGTTGGACTTTCTTCTTCAAACACCATGGCTGCACTGGCCACACCATCAATGGCAGCCATCATTCCTCTTCTTCTCCTCCTCATTCCTACCGGCTCCACCCTCAACGACACTGCTTGCGACGGCAGGCACCCGGAGAAATGCCACCTCGTCCGAGACAAGATCGCCGATTCCGAATTCATGATGGAATCCGAGATCGGACGGATGCTGTTGGACTTCAATAAATTCCAAACCCATCAAACCCAAACCCCCAACCAACCATCGGTGTCGTCCTGCGGTCGACCACCACGGTACGACAGTTGTGTTGGGGAGAAAAGGCAAACGCCGCCACAGGAAAAATGCGACATCTTCAAACGAGTGCCTTGTGGACAATGAAAGGGGAAAAAAACCAAGAAAAGGAAGATTGATATGTGGTTATAATTTTTCGGACGTGTCGTTAAATGGTGAATTTGGTTGTTGTGTTGTTCACTGAAAGAAAATAAAAATGTCTTGTGTAGTTGTGTGCTTAATTATAAATCATTTTTTTACTTTATGTTTTTTTTAAGGAATTTTACTCTCTATGTTTTGTTGCTGTTAATGAGGTTGGTTTTGTACATGTTTGTGGTTTGATTTTGTCCTAAGTTTCAGTAATATTACTCTGGAGTTACCATCAATGTTTATTAGAATGTTGAACGAAATTAAAAACCAGC

Coding sequence (CDS)

CAAAGACCCACCAAAATTCAATACCTTCCCATTAAACCTCATCTTTCTCTCTTCACCCTCACTCATCTCTCCGTTGGACTTTCTTCTTCAAACACCATGGCTGCACTGGCCACACCATCAATGGCAGCCATCATTCCTCTTCTTCTCCTCCTCATTCCTACCGGCTCCACCCTCAACGACACTGCTTGCGACGGCAGGCACCCGGAGAAATGCCACCTCGTCCGAGACAAGATCGCCGATTCCGAATTCATGATGGAATCCGAGATCGGACGGATGCTGTTGGACTTCAATAAATTCCAAACCCATCAAACCCAAACCCCCAACCAACCATCGGTGTCGTCCTGCGGTCGACCACCACGGTACGACAGTTGTGTTGGGGAGAAAAGGCAAACGCCGCCACAGGAAAAATGCGACATCTTCAAACGAGTGCCTTGTGGACAATGA

Protein sequence

QRPTKIQYLPIKPHLSLFTLTHLSVGLSSSNTMAALATPSMAAIIPLLLLLIPTGSTLNDTACDGRHPEKCHLVRDKIADSEFMMESEIGRMLLDFNKFQTHQTQTPNQPSVSSCGRPPRYDSCVGEKRQTPPQEKCDIFKRVPCGQ

Homology

[Close]

BLAST of Bhi01G001480 vs. TrEMBL
Match: tr|A0A0A0LCI8|A0A0A0LCI8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298050 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.3e-24
Identity = 65/116 (56.03%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 33  MAALATPSMAAIIPLLLLLIPTGSTLNDTA----CDGRHPEKCHLVRDKIADSEFMMESE 92
           MAAL+TPS+  II LLLLLIP+G T+NDTA    C+  H +KCHLVRD + D EFMMESE
Sbjct: 1   MAALSTPSIGTII-LLLLLIPSGFTVNDTAASASCNSSHSKKCHLVRDDVGDYEFMMESE 60

Query: 93  IGRML-LDFNKFQTHQTQTPNQPSV-SSCGRPPRYDSCVGEKRQTPPQEKCDIFKR 143
           +G ML ++++K+++  T+  N+  V   CGRPPRY+SC+G KR T  QEKC ++KR
Sbjct: 61  MGWMLSINYDKYKSPPTRIANKQVVKDDCGRPPRYESCLGRKRDTLIQEKCAVYKR 115

[Close]

BLAST of Bhi01G001480 vs. TrEMBL
Match: tr|A0A0A0KVZ2|A0A0A0KVZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G131140 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.5e-18
Identity = 56/110 (50.91%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 39  PSMAAIIPLLLLLIPT--GSTLNDTACDGRHPEKCHLVRDKIADSEFMMESEIGRMLLDF 98
           P+MA +I L LL  PT   +T+N+T  +  +  +  LV D+  DSEF+ME+E  RMLLDF
Sbjct: 8   PTMAILI-LTLLFNPTRCNTTVNETTSEWCYGSENCLVGDESLDSEFLMETETSRMLLDF 67

Query: 99  NKFQTHQTQTPNQPSVSSCGRPPRYDSCVGEKRQTPPQEKCDIFKRV-PC 146
              QT  T  PN+ SV+ CGRPPRYDSC GE+RQ P  E CD+  R  PC
Sbjct: 68  QNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 116

[Close]

BLAST of Bhi01G001480 vs. TrEMBL
Match: tr|A0A0A0KW62|A0A0A0KW62_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G130630 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.9e-14
Identity = 60/128 (46.88%), Postives = 74/128 (57.81%), Query Frame = 0


Query: 25  VGLSSSNTMAA-LATPSMAAIIPLLLL-LIPTGSTLNDTA---CDGRHPEKCHLVRDKIA 84
           +G   SN+MAA L  PSMA +I +LLL  I + + +NDT    CD    E C LV D  +
Sbjct: 1   MGRLPSNSMAATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGLENC-LVGDLNS 60

Query: 85  DSEFMMESEIGRMLLD-FNKFQTHQTQTPNQPSVSSCGRPPRYDSCVGEKRQTPPQEKCD 144
            SEF+M +E   ML+D F  FQT +    N+ SV  C RPPRYDSC+G KR  P  E C 
Sbjct: 61  HSEFLMLTESSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKRSIPNPEPCS 120

Query: 145 IFKRV-PC 146
              RV PC
Sbjct: 121 TLNRVNPC 127

[Close]

BLAST of Bhi01G001480 vs. TrEMBL
Match: tr|A0A0A0L711|A0A0A0L711_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.5e-12
Identity = 50/120 (41.67%), Postives = 62/120 (51.67%), Query Frame = 0


Query: 32  TMAALATPSMAAIIPLLLLLIPT--GSTLNDTACDGRHPE---KCHLVRDKIADSEFMME 91
           T  AL  P  AA+  +L++LIPT  G  L        H       ++V ++   S F+ME
Sbjct: 3   TAPALMIP--AAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVME 62

Query: 92  SEIGRMLLDFNKFQTHQTQTPNQPSVSSCGRPPRYDSCVGEKRQTPPQEKCDIFKRV-PC 146
           S I RML D   F+T  T    Q S   C RPPRYDSC+G KR TPP + C  F R  PC
Sbjct: 63  SHISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 120

[Close]

BLAST of Bhi01G001480 vs. TrEMBL
Match: tr|A0A0A0L9X5|A0A0A0L9X5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298070 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 7.3e-10
Identity = 33/67 (49.25%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 80  DSEFMMESEIGRMLLDFNKFQTHQTQTPNQPSVSSCGRPPRYDSCVGEKRQTPPQEKCDI 139
           D++F+MES + R+L +  +F+T +T   N  SV +C RPPRYDSC+GE R  PP E CD 
Sbjct: 49  DTDFLMESHVSRILAEL-RFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPSENCDP 108

Query: 140 FKRV-PC 146
           + R  PC
Sbjct: 109 YNRANPC 114

[Close]

BLAST of Bhi01G001480 vs. NCBI nr
Match: KGN57776.1 (hypothetical protein Csa_3G298050 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 3.5e-24
Identity = 65/116 (56.03%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 33  MAALATPSMAAIIPLLLLLIPTGSTLNDTA----CDGRHPEKCHLVRDKIADSEFMMESE 92
           MAAL+TPS+  II LLLLLIP+G T+NDTA    C+  H +KCHLVRD + D EFMMESE
Sbjct: 1   MAALSTPSIGTII-LLLLLIPSGFTVNDTAASASCNSSHSKKCHLVRDDVGDYEFMMESE 60

Query: 93  IGRML-LDFNKFQTHQTQTPNQPSV-SSCGRPPRYDSCVGEKRQTPPQEKCDIFKR 143
           +G ML ++++K+++  T+  N+  V   CGRPPRY+SC+G KR T  QEKC ++KR
Sbjct: 61  MGWMLSINYDKYKSPPTRIANKQVVKDDCGRPPRYESCLGRKRDTLIQEKCAVYKR 115

[Close]

BLAST of Bhi01G001480 vs. NCBI nr
Match: KGN53800.1 (hypothetical protein Csa_4G131140 [Cucumis sativus])

HSP 1 Score: 101.7 bits (252), Expect = 2.2e-18
Identity = 56/110 (50.91%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 39  PSMAAIIPLLLLLIPT--GSTLNDTACDGRHPEKCHLVRDKIADSEFMMESEIGRMLLDF 98
           P+MA +I L LL  PT   +T+N+T  +  +  +  LV D+  DSEF+ME+E  RMLLDF
Sbjct: 8   PTMAILI-LTLLFNPTRCNTTVNETTSEWCYGSENCLVGDESLDSEFLMETETSRMLLDF 67

Query: 99  NKFQTHQTQTPNQPSVSSCGRPPRYDSCVGEKRQTPPQEKCDIFKRV-PC 146
              QT  T  PN+ SV+ CGRPPRYDSC GE+RQ P  E CD+  R  PC
Sbjct: 68  QNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 116

[Close]

BLAST of Bhi01G001480 vs. NCBI nr
Match: XP_022948338.1 (uncharacterized protein LOC111452044 [Cucurbita moschata])

HSP 1 Score: 89.4 bits (220), Expect = 1.1e-14
Identity = 54/122 (44.26%), Postives = 68/122 (55.74%), Query Frame = 0


Query: 33  MAALATPSMAAIIPLLLLLIPTGSTL--------NDTACDGRHPEKCHLVRDKIADSEFM 92
           MAA A    AA+  ++LLL PT S          NDT+  G+     +L+ D+  DSEF+
Sbjct: 1   MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGK-----YLIGDQDLDSEFL 60

Query: 93  MESEIGRMLLDFNKFQTHQTQTPNQPSVSSCGRPPRYDSCVGEKRQTPPQEKCDIFKR-V 146
           MES I R+L     FQT +T   N+ S   CGRPPRYDSC+G+K   PP E C  F R  
Sbjct: 61  MESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNN 117

[Close]

BLAST of Bhi01G001480 vs. NCBI nr
Match: XP_022998105.1 (uncharacterized protein LOC111492854 [Cucurbita maxima])

HSP 1 Score: 87.0 bits (214), Expect = 5.7e-14
Identity = 53/122 (43.44%), Postives = 67/122 (54.92%), Query Frame = 0


Query: 33  MAALATPSMAAIIPLLLLLIPTGSTL--------NDTACDGRHPEKCHLVRDKIADSEFM 92
           MAA A    AA+  ++LLL PT S          NDT+  G+     +L+ D+  DSEF+
Sbjct: 1   MAAAAVMIPAAMAIMILLLNPTSSDALTTFKPLNNDTSAAGK-----YLIGDQDIDSEFL 60

Query: 93  MESEIGRMLLDFNKFQTHQTQTPNQPSVSSCGRPPRYDSCVGEKRQTPPQEKCDIFKR-V 146
           MES I R+L     FQT +T   N+ S   C RPPRYDSC+G+K   PP E C  F R  
Sbjct: 61  MESHISRILAGSQDFQTSKTNDANKASGGGCERPPRYDSCLGQKSNNPPPENCGTFNRNN 117

[Close]

BLAST of Bhi01G001480 vs. NCBI nr
Match: KGN53798.1 (hypothetical protein Csa_4G130630 [Cucumis sativus])

HSP 1 Score: 86.7 bits (213), Expect = 7.4e-14
Identity = 60/128 (46.88%), Postives = 74/128 (57.81%), Query Frame = 0


Query: 25  VGLSSSNTMAA-LATPSMAAIIPLLLL-LIPTGSTLNDTA---CDGRHPEKCHLVRDKIA 84
           +G   SN+MAA L  PSMA +I +LLL  I + + +NDT    CD    E C LV D  +
Sbjct: 1   MGRLPSNSMAATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGLENC-LVGDLNS 60

Query: 85  DSEFMMESEIGRMLLD-FNKFQTHQTQTPNQPSVSSCGRPPRYDSCVGEKRQTPPQEKCD 144
            SEF+M +E   ML+D F  FQT +    N+ SV  C RPPRYDSC+G KR  P  E C 
Sbjct: 61  HSEFLMLTESSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKRSIPNPEPCS 120

Query: 145 IFKRV-PC 146
              RV PC
Sbjct: 121 TLNRVNPC 127

The following BLAST results are available for this feature:

BLAST of Bhi01G001480 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi01G001480 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi01G001480 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LCI8\|A0A0A0LCI8_CUCSA	2.3e-24	56.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298050 PE=4 SV=1	[more]
tr\|A0A0A0KVZ2\|A0A0A0KVZ2_CUCSA	1.5e-18	50.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G131140 PE=4 SV=1	[more]
tr\|A0A0A0KW62\|A0A0A0KW62_CUCSA	4.9e-14	46.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G130630 PE=4 SV=1	[more]
tr\|A0A0A0L711\|A0A0A0L711_CUCSA	3.5e-12	41.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1	[more]
tr\|A0A0A0L9X5\|A0A0A0L9X5_CUCSA	7.3e-10	49.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298070 PE=4 SV=1	[more]

BLAST of Bhi01G001480 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57776.1	3.5e-24	56.03	hypothetical protein Csa_3G298050 [Cucumis sativus]	[more]
KGN53800.1	2.2e-18	50.91	hypothetical protein Csa_4G131140 [Cucumis sativus]	[more]
XP_022948338.1	1.1e-14	44.26	uncharacterized protein LOC111452044 [Cucurbita moschata]	[more]
XP_022998105.1	5.7e-14	43.44	uncharacterized protein LOC111492854 [Cucurbita maxima]	[more]
KGN53798.1	7.4e-14	46.88	hypothetical protein Csa_4G130630 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M001480	Bhi01M001480	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..131

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi01G001480	ClCG05G011600	Watermelon (Charleston Gray)	wcgwgoB441

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi01G001480	Cucumber (Gy14) v1	cgywgoB005
Bhi01G001480	Cucumber (Gy14) v2	cgybwgoB259
Bhi01G001480	Cucumber (Gy14) v2	cgybwgoB290
Bhi01G001480	Cucurbita maxima (Rimu)	cmawgoB0319
Bhi01G001480	Cucurbita maxima (Rimu)	cmawgoB0562
Bhi01G001480	Cucurbita moschata (Rifu)	cmowgoB0307
Bhi01G001480	Cucurbita moschata (Rifu)	cmowgoB0559
Bhi01G001480	Cucurbita pepo (Zucchini)	cpewgoB0673
Bhi01G001480	Cucurbita pepo (Zucchini)	cpewgoB0773
Bhi01G001480	Wild cucumber (PI 183967)	cpiwgoB271
Bhi01G001480	Wild cucumber (PI 183967)	cpiwgoB303
Bhi01G001480	Cucumber (Chinese Long) v3	cucwgoB274
Bhi01G001480	Cucumber (Chinese Long) v3	cucwgoB305
Bhi01G001480	Cucumber (Chinese Long) v2	cuwgoB271
Bhi01G001480	Bottle gourd (USVL1VR-Ls)	lsiwgoB447
Bhi01G001480	Melon (DHL92) v3.6.1	medwgoB540
Bhi01G001480	Melon (DHL92) v3.6.1	medwgoB546
Bhi01G001480	Melon (DHL92) v3.5.1	mewgoB539
Bhi01G001480	Melon (DHL92) v3.5.1	mewgoB542
Bhi01G001480	Watermelon (97103) v2	wgowmbB194
Bhi01G001480	Watermelon (97103) v1	wgowmB215
Bhi01G001480	Silver-seed gourd	carwgoB0584
Bhi01G001480	Silver-seed gourd	carwgoB0896