Bhi01G000648 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi01G000648
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Glutelin type-A
Location	chr1 : 16686451 .. 16686785 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGAGGTTGTTATTATTCTTGATCTCCCAAGGAGATTCCAATGCTTAGTGAAGGAAACATCGACGCTTCTAAGCTCGCCCTCGAGGGGCTTTGCTCTTCCTCACTACTTTGATTCTGCCAAGGTCGCTCACATTCTTCGAGGTAAATTTTAATTTTGTTTACTTTCTACTCTATCTGAAAGTTTCAATTTTAGTACGAGTATGATCTAATTGATGAACAAAATGTTTCAGGCAATGGAGTAGCTGGAATCATTCTACTAGAATCGAAGGAGAAGGTTATCGCAATCAAGAAAGGAGATGCAATCGCTCTCCCATTTCGCATGGTTTGTTAG

mRNA sequence

ATGATAGAGGTTGTTATTATTCTTGATCTCCCAAGGAGATTCCAATGCTTAGTGAAGGAAACATCGACGCTTCTAAGCTCGCCCTCGAGGGGCTTTGCTCTTCCTCACTACTTTGATTCTGCCAAGGTCGCTCACATTCTTCGAGGCAATGGAGTAGCTGGAATCATTCTACTAGAATCGAAGGAGAAGGTTATCGCAATCAAGAAAGGAGATGCAATCGCTCTCCCATTTCGCATGGTTTGTTAG

Coding sequence (CDS)

ATGATAGAGGTTGTTATTATTCTTGATCTCCCAAGGAGATTCCAATGCTTAGTGAAGGAAACATCGACGCTTCTAAGCTCGCCCTCGAGGGGCTTTGCTCTTCCTCACTACTTTGATTCTGCCAAGGTCGCTCACATTCTTCGAGGCAATGGAGTAGCTGGAATCATTCTACTAGAATCGAAGGAGAAGGTTATCGCAATCAAGAAAGGAGATGCAATCGCTCTCCCATTTCGCATGGTTTGTTAG

Protein sequence

MIEVVIILDLPRRFQCLVKETSTLLSSPSRGFALPHYFDSAKVAHILRGNGVAGIILLESKEKVIAIKKGDAIALPFRMVC

Homology

[Close]

BLAST of Bhi01G000648 vs. TAIR10
Match: AT1G07750.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 72.4 bits (176), Expect = 1.4e-13
Identity = 34/56 (60.71%), Postives = 46/56 (82.14%), Query Frame = 0


Query: 25 LSSPSRGFALPHYFDSAKVAHILRGNGVAGIILLESKEKVIAIKKGDAIALPFRMV 81
          L+    GFA+P Y DS+KVA++L+G+G AGI+L E +EKVIAIK+GD+IALPF +V
Sbjct: 42 LALEKNGFAVPRYSDSSKVAYVLQGSGTAGIVLPEKEEKVIAIKQGDSIALPFGVV 97

[Close]

BLAST of Bhi01G000648 vs. TAIR10
Match: AT2G28680.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 69.7 bits (169), Expect = 9.3e-13
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 0


Query: 31 GFALPHYFDSAKVAHILRGNGVAGIILLESKEKVIAIKKGDAIALPFRMV 81
          G ALP Y DS KVA++L+G G AGI+L E +EKVIAIKKGD+IALPF +V
Sbjct: 48 GLALPRYSDSPKVAYVLQGAGTAGIVLPEKEEKVIAIKKGDSIALPFGVV 97

[Close]

BLAST of Bhi01G000648 vs. TrEMBL
Match: tr|A0A0A0K666|A0A0A0K666_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G281380 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.9e-13
Identity = 42/56 (75.00%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 25 LSSPSRGFALPHYFDSAKVAHILRGNGVAGIILLESKEKVIAIKKGDAIALPFRMV 81
          L+    GFALP Y DSAKVA++L+GNGVAGIIL ES+EKVIAIKKGDAIALPF +V
Sbjct: 42 LALEKNGFALPRYSDSAKVAYVLQGNGVAGIILPESEEKVIAIKKGDAIALPFGVV 97

[Close]

BLAST of Bhi01G000648 vs. TrEMBL
Match: tr|A0A2I4F8Z8|A0A2I4F8Z8_9ROSI (glutelin type-B 5-like OS=Juglans regia OX=51240 GN=LOC108996597 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.6e-13
Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 25 LSSPSRGFALPHYFDSAKVAHILRGNGVAGIILLESKEKVIAIKKGDAIALPFRMV 81
          L+    GFALP Y DSAKVA++L+GNGVAGI+L ES+EKVIAIKKGDAIALPF +V
Sbjct: 42 LALGKNGFALPRYSDSAKVAYVLQGNGVAGIVLPESEEKVIAIKKGDAIALPFGVV 97

[Close]

BLAST of Bhi01G000648 vs. TrEMBL
Match: tr|A0A2P4I660|A0A2P4I660_QUESU (Glutelin type-b 5 OS=Quercus suber OX=58331 GN=CFP56_02024 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 8.7e-13
Identity = 40/56 (71.43%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 25 LSSPSRGFALPHYFDSAKVAHILRGNGVAGIILLESKEKVIAIKKGDAIALPFRMV 81
          L+    GFALP Y DSAKVA++L+GNGVAGI+L ES+EKV+AIKKGDAIALPF +V
Sbjct: 42 LALDKNGFALPRYSDSAKVAYVLQGNGVAGIVLPESEEKVLAIKKGDAIALPFGVV 97

[Close]

BLAST of Bhi01G000648 vs. TrEMBL
Match: tr|A0A2P4I640|A0A2P4I640_QUESU (Glutelin type-b 5 OS=Quercus suber OX=58331 GN=CFP56_02024 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 8.7e-13
Identity = 40/56 (71.43%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 25 LSSPSRGFALPHYFDSAKVAHILRGNGVAGIILLESKEKVIAIKKGDAIALPFRMV 81
          L+    GFALP Y DSAKVA++L+GNGVAGI+L ES+EKV+AIKKGDAIALPF +V
Sbjct: 42 LALDKNGFALPRYSDSAKVAYVLQGNGVAGIVLPESEEKVLAIKKGDAIALPFGVV 97

[Close]

BLAST of Bhi01G000648 vs. TrEMBL
Match: tr|A0A2N9IRW9|A0A2N9IRW9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56109 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-12
Identity = 40/56 (71.43%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 25 LSSPSRGFALPHYFDSAKVAHILRGNGVAGIILLESKEKVIAIKKGDAIALPFRMV 81
          L+    GFALP Y DSAKVA++L+GNGVAGI+L E++EKVIAIKKGDAIALPF +V
Sbjct: 42 LAIEKNGFALPRYSDSAKVAYVLQGNGVAGIVLPEAEEKVIAIKKGDAIALPFGVV 97

[Close]

BLAST of Bhi01G000648 vs. NCBI nr
Match: XP_004150394.1 (PREDICTED: glutelin type-B 5-like isoform X1 [Cucumis sativus] >KGN44409.1 hypothetical protein Csa_7G281380 [Cucumis sativus])

HSP 1 Score: 82.8 bits (203), Expect = 5.9e-13
Identity = 42/56 (75.00%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 25 LSSPSRGFALPHYFDSAKVAHILRGNGVAGIILLESKEKVIAIKKGDAIALPFRMV 81
          L+    GFALP Y DSAKVA++L+GNGVAGIIL ES+EKVIAIKKGDAIALPF +V
Sbjct: 42 LALEKNGFALPRYSDSAKVAYVLQGNGVAGIILPESEEKVIAIKKGDAIALPFGVV 97

[Close]

BLAST of Bhi01G000648 vs. NCBI nr
Match: XP_022159414.1 (legumin type B-like, partial [Momordica charantia])

HSP 1 Score: 82.8 bits (203), Expect = 5.9e-13
Identity = 42/56 (75.00%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 25 LSSPSRGFALPHYFDSAKVAHILRGNGVAGIILLESKEKVIAIKKGDAIALPFRMV 81
          L+    GFALP Y DSAKVA++L+GNGVAGIIL ES+EKVIAIKKGDAIALPF +V
Sbjct: 42 LALEKNGFALPRYSDSAKVAYVLQGNGVAGIILPESEEKVIAIKKGDAIALPFGVV 97

[Close]

BLAST of Bhi01G000648 vs. NCBI nr
Match: XP_022932542.1 (glutelin type-D 1-like [Cucurbita moschata])

HSP 1 Score: 82.8 bits (203), Expect = 5.9e-13
Identity = 42/56 (75.00%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 25 LSSPSRGFALPHYFDSAKVAHILRGNGVAGIILLESKEKVIAIKKGDAIALPFRMV 81
          L+    GFALP Y DSAKVA++L+GNGVAGIIL ES+EKVIAIKKGDAIALPF +V
Sbjct: 42 LALEKNGFALPRYSDSAKVAYVLQGNGVAGIILPESEEKVIAIKKGDAIALPFGVV 97

[Close]

BLAST of Bhi01G000648 vs. NCBI nr
Match: XP_022976927.1 (glutelin type-D 1-like [Cucurbita maxima])

HSP 1 Score: 82.8 bits (203), Expect = 5.9e-13
Identity = 42/56 (75.00%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 25 LSSPSRGFALPHYFDSAKVAHILRGNGVAGIILLESKEKVIAIKKGDAIALPFRMV 81
          L+    GFALP Y DSAKVA++L+GNGVAGIIL ES+EKVIAIKKGDAIALPF +V
Sbjct: 42 LALEKNGFALPRYSDSAKVAYVLQGNGVAGIILPESEEKVIAIKKGDAIALPFGVV 97

[Close]

BLAST of Bhi01G000648 vs. NCBI nr
Match: XP_023535755.1 (glutelin type-D 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 82.8 bits (203), Expect = 5.9e-13
Identity = 42/56 (75.00%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 25 LSSPSRGFALPHYFDSAKVAHILRGNGVAGIILLESKEKVIAIKKGDAIALPFRMV 81
          L+    GFALP Y DSAKVA++L+GNGVAGIIL ES+EKVIAIKKGDAIALPF +V
Sbjct: 42 LALEKNGFALPRYSDSAKVAYVLQGNGVAGIILPESEEKVIAIKKGDAIALPFGVV 97

The following BLAST results are available for this feature:

BLAST of Bhi01G000648 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G07750.1	1.4e-13	60.71	RmlC-like cupins superfamily protein	[more]
AT2G28680.1	9.3e-13	68.00	RmlC-like cupins superfamily protein	[more]

BLAST of Bhi01G000648 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi01G000648 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K666\|A0A0A0K666_CUCSA	3.9e-13	75.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G281380 PE=4 SV=1	[more]
tr\|A0A2I4F8Z8\|A0A2I4F8Z8_9ROSI	6.6e-13	73.21	glutelin type-B 5-like OS=Juglans regia OX=51240 GN=LOC108996597 PE=4 SV=1	[more]
tr\|A0A2P4I660\|A0A2P4I660_QUESU	8.7e-13	71.43	Glutelin type-b 5 OS=Quercus suber OX=58331 GN=CFP56_02024 PE=4 SV=1	[more]
tr\|A0A2P4I640\|A0A2P4I640_QUESU	8.7e-13	71.43	Glutelin type-b 5 OS=Quercus suber OX=58331 GN=CFP56_02024 PE=4 SV=1	[more]
tr\|A0A2N9IRW9\|A0A2N9IRW9_FAGSY	1.1e-12	71.43	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56109 PE=4 SV=1	[more]

BLAST of Bhi01G000648 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150394.1	5.9e-13	75.00	PREDICTED: glutelin type-B 5-like isoform X1 [Cucumis sativus] >KGN44409.1 hypot...	[more]
XP_022159414.1	5.9e-13	75.00	legumin type B-like, partial [Momordica charantia]	[more]
XP_022932542.1	5.9e-13	75.00	glutelin type-D 1-like [Cucurbita moschata]	[more]
XP_022976927.1	5.9e-13	75.00	glutelin type-D 1-like [Cucurbita maxima]	[more]
XP_023535755.1	5.9e-13	75.00	glutelin type-D 1-like [Cucurbita pepo subsp. pepo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0045735	nutrient reservoir activity

Vocabulary: **INTERPRO**
Term	Definition
IPR011051	RmlC_Cupin_sf
IPR006045	Cupin_1
IPR014710	RmlC-like_jellyroll

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0045735	nutrient reservoir activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M000648	Bhi01M000648	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014710	RmlC-like jelly roll fold	GENE3D	G3DSA:2.60.120.10		coord: 10..80 e-value: 1.5E-8 score: 36.1
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 28..80 e-value: 7.6E-6 score: 25.5
None	No IPR available	PANTHER	PTHR31189:SF24	SUBFAMILY NOT NAMED	coord: 29..80
None	No IPR available	PANTHER	PTHR31189	FAMILY NOT NAMED	coord: 29..80
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	SSF51182	RmlC-like cupins	coord: 25..79

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi01G000648	Wax gourd	wgowgoB028
Bhi01G000648	Cucumber (Gy14) v1	cgywgoB522
Bhi01G000648	Cucumber (Gy14) v1	cgywgoB730
Bhi01G000648	Cucumber (Gy14) v2	cgybwgoB257
Bhi01G000648	Cucumber (Gy14) v2	cgybwgoB532
Bhi01G000648	Cucurbita maxima (Rimu)	cmawgoB0328
Bhi01G000648	Cucurbita maxima (Rimu)	cmawgoB0473
Bhi01G000648	Cucurbita maxima (Rimu)	cmawgoB1006
Bhi01G000648	Cucurbita maxima (Rimu)	cmawgoB1107
Bhi01G000648	Cucurbita moschata (Rifu)	cmowgoB0317
Bhi01G000648	Cucurbita moschata (Rifu)	cmowgoB0472
Bhi01G000648	Cucurbita moschata (Rifu)	cmowgoB1005
Bhi01G000648	Cucurbita moschata (Rifu)	cmowgoB1104
Bhi01G000648	Cucurbita pepo (Zucchini)	cpewgoB0188
Bhi01G000648	Cucurbita pepo (Zucchini)	cpewgoB0401
Bhi01G000648	Cucurbita pepo (Zucchini)	cpewgoB0783
Bhi01G000648	Cucurbita pepo (Zucchini)	cpewgoB1110
Bhi01G000648	Wild cucumber (PI 183967)	cpiwgoB269
Bhi01G000648	Wild cucumber (PI 183967)	cpiwgoB562
Bhi01G000648	Cucumber (Chinese Long) v3	cucwgoB272
Bhi01G000648	Cucumber (Chinese Long) v3	cucwgoB575
Bhi01G000648	Cucumber (Chinese Long) v2	cuwgoB269
Bhi01G000648	Cucumber (Chinese Long) v2	cuwgoB557
Bhi01G000648	Bottle gourd (USVL1VR-Ls)	lsiwgoB041
Bhi01G000648	Bottle gourd (USVL1VR-Ls)	lsiwgoB432
Bhi01G000648	Melon (DHL92) v3.6.1	medwgoB106
Bhi01G000648	Melon (DHL92) v3.6.1	medwgoB530
Bhi01G000648	Melon (DHL92) v3.5.1	mewgoB105
Bhi01G000648	Melon (DHL92) v3.5.1	mewgoB529
Bhi01G000648	Watermelon (Charleston Gray)	wcgwgoB426
Bhi01G000648	Watermelon (Charleston Gray)	wcgwgoB521
Bhi01G000648	Watermelon (97103) v2	wgowmbB178
Bhi01G000648	Watermelon (97103) v2	wgowmbB203
Bhi01G000648	Watermelon (97103) v1	wgowmB201
Bhi01G000648	Watermelon (97103) v1	wgowmB238
Bhi01G000648	Silver-seed gourd	carwgoB0086
Bhi01G000648	Silver-seed gourd	carwgoB0411
Bhi01G000648	Silver-seed gourd	carwgoB0722
Bhi01G000648	Silver-seed gourd	carwgoB0972