Cucurbit Expression Atlas


Overview of this BioProject:

BioProjectPRJEB15551
Melon RNA-Seq analysis was used to identify candidate resistance genes and to understand the early molecular processes deployed during melon versus Fusarium oxysporum f.sp. melonis Snyd. & Hans race 1.2 (FOM1.2) interaction in the resistant doubled haploid line NAD as opposed to the susceptible genotype Charentais-T at 24 and 48 hours post inoculation (hpi).

Properties this BioBroject:

Property NameValue
Data typeTranscriptome or Gene expression
Sample scopeMonoisolate
MaterialTranscriptome
CaptureRandomSurvey
Experimental_design
# CHT: melon Charentais-T
# NAD: melon NAD
# FOM: FOM1.2 inoculated
# control: mock treatment
# h: hours post treatment

BioSamples of this BioProject:

BioSampleOrganismDescription
CHT_control_24hMelonPooled stems of melon Charentais-T at 24 hours post mock treatment ; tissue : Stem; cultivar : Charentais-T;
CHT_control_48hMelonPooled stems of melon Charentais-T at 48 hours post mock treatment ; tissue : Stem; cultivar : Charentais-T;
CHT_FOM_24hMelonPooled stems of melon Charentais-T at 24 hours post FOM1.2 inoculation ; tissue : Stem; cultivar : Charentais-T;
CHT_FOM_48hMelonPooled stems of melon Charentais-T at 48 hours post FOM1.2 inoculation ; tissue : Stem; cultivar : Charentais-T;
NAD_control_24hMelonPooled stems of melon NAD at 24 hours post mock treatment ; tissue : Stem; cultivar : NAD;
NAD_control_48hMelonPooled stems of melon NAD at 48 hours post mock treatment ; tissue : Stem; cultivar : NAD;
NAD_FOM_24hMelonPooled stems of melon NAD at 24 hours post FOM1.2 inoculation ; tissue : Stem; cultivar : NAD;
NAD_FOM_48hMelonPooled stems of melon NAD at 48 hours post FOM1.2 inoculation ; tissue : Stem; cultivar : NAD;