MELO3C004926 (gene) Melon (DHL92) v3.5.1

NameMELO3C004926
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionLysM domain-containing GPI-anchored protein 1
Locationchr12 : 6553058 .. 6553778 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTACAATAACAACCCAATAACTCTCTTCTTGTAACCCCAACCATCCATATTATTTATAGTCCTGACAAACTTTTCTTTCTAATTCCATTTTTTCATCAAAAAGAAAAATGAGAATTAGAAACAACCCATCGTTATTGTTAATTGGTTTGTTTTTGTTATTGCTTTTGAGCTGCTCTTGCTTGACTTCAGCTGATGCAAAGCAATTTCAGGCCATGGAAGAAGCTCAGAAAAATAAATTGAATGAAGATGGGAAGCCTTATGTTATTGCTCGTCATTATCCAGAAGACGGTGGTTCAAAGAACCATCACTTTATCCCAAGAGAAGCTTTCAACAACTATGGTGGGAGTGATAATGGTGGTGGCTAACAACGCGTTTGGATTGCTTTCTAGGCGTTTATATAAGTGTTTATAATGCAAAAAAAATGTCAATCCTTATAAACACTTAGAAAGATTGTCTAAACAAAACTTGAAAATTCACTCTCTCCAGTTTTTTTTCTTTCTTTTTTAAGGTTAGCAATCAATCTAGGGGAGTAATTTGAACTGCTAACCTTTTAACCTCTGTCTAAGTCGGTTGAACTAGACTATGAATTGCATTGTGTGTACTTAGAGTATTGTTTGTTTGCAAACAACATCTTAGGCAAAGAAACAGTTTATCAAATATATGATAAAGGTTTGAAATTTGCATGTCTAAATATGTTGATTGTTGAACATCAAATGGTTTA

mRNA sequence

CTACAATAACAACCCAATAACTCTCTTCTTGTAACCCCAACCATCCATATTATTTATAGTCCTGACAAACTTTTCTTTCTAATTCCATTTTTTCATCAAAAAGAAAAATGAGAATTAGAAACAACCCATCGTTATTGTTAATTGGTTTGTTTTTGTTATTGCTTTTGAGCTGCTCTTGCTTGACTTCAGCTGATGCAAAGCAATTTCAGGCCATGGAAGAAGCTCAGAAAAATAAATTGAATGAAGATGGGAAGCCTTATGTTATTGCTCGTCATTATCCAGAAGACGGTGGTTCAAAGAACCATCACTTTATCCCAAGAGAAGCTTTCAACAACTATGGTGGGAGTGATAATGGTGGTGGCTAACAACGCGTTTGGATTGCTTTCTAGGCGTTTATATAAGTGTTTATAATGCAAAAAAAATGTCAATCCTTATAAACACTTAGAAAGATTGTCTAAACAAAACTTGAAAATTCACTCTCTCCAGTTTTTTTTCTTTCTTTTTTAAGGTTAGCAATCAATCTAGGGGAGTAATTTGAACTGCTAACCTTTTAACCTCTGTCTAAGTCGGTTGAACTAGACTATGAATTGCATTGTGTGTACTTAGAGTATTGTTTGTTTGCAAACAACATCTTAGGCAAAGAAACAGTTTATCAAATATATGATAAAGGTTTGAAATTTGCATGTCTAAATATGTTGATTGTTGAACATCAAATGGTTTA

Coding sequence (CDS)

ATGAGAATTAGAAACAACCCATCGTTATTGTTAATTGGTTTGTTTTTGTTATTGCTTTTGAGCTGCTCTTGCTTGACTTCAGCTGATGCAAAGCAATTTCAGGCCATGGAAGAAGCTCAGAAAAATAAATTGAATGAAGATGGGAAGCCTTATGTTATTGCTCGTCATTATCCAGAAGACGGTGGTTCAAAGAACCATCACTTTATCCCAAGAGAAGCTTTCAACAACTATGGTGGGAGTGATAATGGTGGTGGCTAA

Protein sequence

MRIRNNPSLLLIGLFLLLLLSCSCLTSADAKQFQAMEEAQKNKLNEDGKPYVIARHYPEDGGSKNHHFIPREAFNNYGGSDNGGG*
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU45077melon EST collection version 4.0transcribed_cluster
MU55977melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C004926T1MELO3C004926T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU45077MU45077transcribed_cluster
MU55977MU55977transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..22
score: