MU53016 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU53016
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Nucleolar protein 8
Location	chr2 : 10906731 .. 10907796 (+)
Sequence length	785

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CTCAACTGGGGCTTGAACCCTGACAACTTGAGCCAAGCGAAGTGCATTTGGGCAACTGCTGGAAGCCTGCAACTTGAAGCGCTCCGAAGAAGAAGAAAAGCCATGGAAAGAGGACAAAGTGCTTCCGAAAAGATGAGAATTTACGTCGGAGGACTGGGTGCCTCCATGACCGAAGACGATCTTCGAAAGGTTTTTCACAGCGTCGGCGGTGTGGTGGAGGCCGTCGATTTCGTTCGTACCAAATCTCGCAGCTTTGCTTATGTCGACTTCTTTCCGTCCTCCCAATCTTCCCTCTCCAAACTTTTCAGCACTTACAATGGATGTGCTTGGAAAGGAGGAAAGTTAAGGCTTGAGAAAGCCAAGGAAAATTATCTTGCTCGTTTGAAGCGGGAGTGGGAGGAAGATGCTCAAATTAGGGATAGTAATGTTGGTGCAGACATGGAGGTTGTGGCTCCAGAATCTACTCAGCATGTCACCAAGTCGGAGCACATTAATATTTTCTTTCCAAGCTTAGGAGAGGTGAAGTCTTTGCCAATTAGTGGAACAGGGACTCACAAATATGACTTTCCACATGTTGAGGTGCCTCCTTTTCCTGTGCATTTTTGTGACTGTGAAGAGCATGATGTTTCTTCTCCCATTGGCAATTCTAAGGACACAAAAACAAGAGATTTGAATGCTGAGAATGGTGGAATGGCTGAAGATGAAATTGAGATGATGAATGCAGTTATGAACAAGCTCTTTGAGAGGGAAGAAGCTTCTCAATCTAATTGTAACGGTTCCATGGC

Library


Library category	ESTs
melon CM-PEa library	1
melon PS library	1

Homology

[Close]

BLAST of MU53016 vs. TrEMBL
Match: A0A0A0LXQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G651690 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.4e-98
Identity = 183/227 (80.62%), Postives = 193/227 (85.02%), Query Frame = 1


Query: 103 MERGQSASEKMRIYVGGLGASMTEDDLRKVFHSVGGVVEAVDFVRTKSRSFAYVDXXXXX 162
           ME+GQSASE MRIYVGGLGA+MTEDDLRKVFHSVGGVVEAVDFVRTKSRSFAYVD     
Sbjct: 1   MEKGQSASENMRIYVGGLGAAMTEDDLRKVFHSVGGVVEAVDFVRTKSRSFAYVDFFPSS 60

Query: 163 XXXXXXXXXTYNGCAWKGGKLRLEKAKENYLARLKREWEEDAQIRDSNVGADMEVVAPES 222
                    TYNGCAWKGGKLRLEKAKENYLARL REWEEDAQIRD+NVGADME+VAPES
Sbjct: 61  QSSLSKLFSTYNGCAWKGGKLRLEKAKENYLARLNREWEEDAQIRDNNVGADMELVAPES 120

Query: 223 TQHVTKSEHINIFFPSLGEVKSLPISGTGTHKYDXXXXXXXXXXXXXCDCEEHDVSSPIG 282
           T+HVTKSEHINIFFPSLGEVK LPISGTGTHKYD             CDCEEH+ SSPIG
Sbjct: 121 TEHVTKSEHINIFFPSLGEVKPLPISGTGTHKYDFPHVEVPPFPVHFCDCEEHNASSPIG 180

Query: 283 NSKDTKTRDLNAENGGMAEDEIEMMNAVMNKLFEREEASQSNCNGSM 342
           NSK TKTRDLNAENGGM EDEI+MMNAV++KLFER+EASQSNCN SM
Sbjct: 181 NSKYTKTRDLNAENGGMDEDEIKMMNAVLSKLFERKEASQSNCNDSM 227

Query: 343  402
           
Sbjct: 241  227

Query: 403  462
           
Sbjct: 301  227

Query: 463  522
           
Sbjct: 361  227

Query: 523  582
           
Sbjct: 421  227

Query: 583  642
           
Sbjct: 481  227

Query: 643  702
           
Sbjct: 541  227

Query: 703  762
           
Sbjct: 601  227

Query: 763  784
           
Sbjct: 661  227

[Close]

BLAST of MU53016 vs. TrEMBL
Match: M4CEN9_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.3e-45
Identity = 103/215 (47.91%), Postives = 134/215 (62.33%), Query Frame = 1


Query: 112 GQSASEKMRIYVGGLGASMTEDDLRKVFHSVGGVVEAVDFVRTKSRSFAYVDXXXXXXXX 171
           G      +R++VGGLG S+  DDL K+F  +G  VEAV+FVRTK RSFAY+D        
Sbjct: 5   GSGGGGGVRLHVGGLGESVGRDDLLKIFSPMG-FVEAVEFVRTKGRSFAYIDFSPASENS 64

Query: 172 XXXXXXTYNGCAWKGGKLRLEKAKENYLARLKREWEEDAQIRDSNVGADMEVVAPESTQH 231
                 TYNGC WKGGKLRLEKAKE+Y+ARLKREW E A +   +  +D  V APE    
Sbjct: 65  LTKLFSTYNGCKWKGGKLRLEKAKEHYMARLKREWAESASV---SASSDDTVKAPEK--- 124

Query: 232 VTKSEHINIFFPSLGEVKSLPISGTGTHKYD-XXXXXXXXXXXXXCDCEEHDVSSPIGNS 291
           +T S H+NIFFP L +VK++P+SGTG HKY               CDCEEH  S      
Sbjct: 125 LTPSTHLNIFFPRLRKVKAMPLSGTGKHKYSFQRVAVPSLLPKTFCDCEEHSASL---TP 184

Query: 292 KDTKTRDLNAENGGMAEDEIEMMNAVMNKLFEREE 351
           ++T  RD+ A N G+ E+E+ +MN+VMNKL ++++
Sbjct: 185 QETHARDVEALNVGINEEEVNIMNSVMNKLLQKDD 209

Query: 352  411
           
Sbjct: 245  209

Query: 412  471
           
Sbjct: 305  209

Query: 472  531
           
Sbjct: 365  209

Query: 532  591
           
Sbjct: 425  209

Query: 592  651
           
Sbjct: 485  209

Query: 652  711
           
Sbjct: 545  209

Query: 712  754
           
Sbjct: 605  209

[Close]

BLAST of MU53016 vs. TrEMBL
Match: R0EZ19_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10027727mg PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.0e-45
Identity = 107/215 (49.77%), Postives = 136/215 (63.26%), Query Frame = 1


Query: 115 QSASEKMRIYVGGLGASMTEDDLRKVFHSVGGVVEAVDFVRTKSRSFAYVDXXXXXXXXX 174
           +S+   +R++VGGLG S+  DDL K+F  +G  V+AV+FVRTK RSFAY+D         
Sbjct: 4   KSSGGGVRLHVGGLGESVGRDDLLKIFSPMG-TVDAVEFVRTKGRSFAYIDFSPSSDKSL 63

Query: 175 XXXXXTYNGCAWKGGKLRLEKAKENYLARLKREWEEDAQIRDSNVGA--DMEVVAPESTQ 234
                TYNGC WKGG+LRLEKAKE+YLARLKREWEE +   DS + A  D  + AP  + 
Sbjct: 64  IKLFSTYNGCVWKGGRLRLEKAKEHYLARLKREWEEASSPCDSTIKAPSDNTIKAPSDS- 123

Query: 235 HVTKSEHINIFFPSLGEVKSLPISGTGTHKYD-XXXXXXXXXXXXXCDCEEHDVS-SPIG 294
             T S H+NIFFP L +VK++P+SGTG HKY               CDCEEH  S +P+ 
Sbjct: 124 --TPSTHLNIFFPRLRKVKAMPLSGTGKHKYSFQRVPLTSSLPKSICDCEEHSNSLTPL- 183

Query: 295 NSKDTKTRDLNAENGGMAEDEIEMMNAVMNKLFER 354
              +T   DL A N G  EDE+ +MN+VMNKLFE+
Sbjct: 184 ---ETHLHDLEALNVGRNEDEVNVMNSVMNKLFEK 210

Query: 355  414
           
Sbjct: 244  210

Query: 415  474
           
Sbjct: 304  210

Query: 475  534
           
Sbjct: 364  210

Query: 535  594
           
Sbjct: 424  210

Query: 595  654
           
Sbjct: 484  210

Query: 655  714
           
Sbjct: 544  210

Query: 715  748
           
Sbjct: 604  210

[Close]

BLAST of MU53016 vs. TrEMBL
Match: A0A078I2R0_BRANA (BnaC09g33640D protein OS=Brassica napus GN=BnaC09g33640D PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 6.7e-45
Identity = 105/219 (47.95%), Postives = 137/219 (62.56%), Query Frame = 1


Query: 103 MERGQSASEKMRIYVGGLGASMTEDDLRKVFHSVGGVVEAVDFVRTKSRSFAYVDXXXXX 162
           ME G S    +R++VGGLG S+  DDL K+F  +G V EAV+FVRTK RSFAY+D     
Sbjct: 1   MEGGGSGGG-VRLHVGGLGESVGRDDLLKIFSPMGSV-EAVEFVRTKGRSFAYIDFSPAS 60

Query: 163 XXXXXXXXXTYNGCAWKGGKLRLEKAKENYLARLKREWEEDAQIRDSNVGADMEVVAPES 222
                    TYNGC WKGGKLRLEKAKE+Y+ARLKREW E A +   +  +D  V APE 
Sbjct: 61  ENSLTKLFSTYNGCKWKGGKLRLEKAKEHYMARLKREWAESASV---SASSDDTVKAPEE 120

Query: 223 TQHVTKSEHINIFFPSLGEVKSLPISGTGTHKYD-XXXXXXXXXXXXXCDCEEHDVSSPI 282
           +     S H+NIFFP L +VK++P+SGTG HKY               CDCEEH  S   
Sbjct: 121 S---PPSTHLNIFFPRLRKVKAMPLSGTGKHKYSFQRVAVPSLLPKTFCDCEEHSASL-- 180

Query: 283 GNSKDTKTRDLNAENGGMAEDEIEMMNAVMNKLFEREEA 342
              ++T  RD+ A N G+ E+E+ +MN+VMNKL +++++
Sbjct: 181 -TPQETHARDVEALNVGINEEEVNIMNSVMNKLLQKDDS 208

Query: 343  402
           
Sbjct: 241  208

Query: 403  462
           
Sbjct: 301  208

Query: 463  522
           
Sbjct: 361  208

Query: 523  582
           
Sbjct: 421  208

Query: 583  642
           
Sbjct: 481  208

Query: 643  702
           
Sbjct: 541  208

Query: 703  757
           
Sbjct: 601  208

[Close]

BLAST of MU53016 vs. TrEMBL
Match: A0A067K686_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19789 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.5e-44
Identity = 101/227 (44.49%), Postives = 133/227 (58.59%), Query Frame = 1


Query: 103 MERGQSASEKMRIYVGGLGASMTEDDLRKVFHSVGGVVEAVDFVRTKSRSFAYVDXXXXX 162
           ME G+  S   RIYVGGLG S+T DDL  +F  +GG ++AVD +RTK RSFAY+D     
Sbjct: 1   MEGGEDDSTT-RIYVGGLGESVTSDDLCTIFSKIGGDIKAVDIIRTKGRSFAYIDFSPSS 60

Query: 163 XXXXXXXXXTYNGCAWKGGKLRLEKAKENYLARLKREWEEDAQI--------RDSNVGAD 222
                    TYNGC WKG +LRLEKAKE+YL RLK+EW EDAQ+         D +   +
Sbjct: 61  HNSLSKLFSTYNGCVWKGKRLRLEKAKEHYLDRLKQEWAEDAQLASSTYTAAADDDTDKN 120

Query: 223 MEVVAPESTQHVTKSEHINIFFPSLGEVKSLPISGTGTHKYDXXXXXXXXXXXXXCDCEE 282
           ME       +  ++ + + IFFP L ++KSLP SGTG H+Y              CDCEE
Sbjct: 121 MESFKKPMKELSSEKKQLRIFFPRLQKLKSLPFSGTGKHRYSFRRVEVPPLPTHFCDCEE 180

Query: 283 HDVSSPIGNSKDTKTRDLNAENGGMAEDEIEMMNAVMNKLFEREEAS 342
           H  S  +  ++      L  + GGM+++E++MMN+VMNKLFE E  S
Sbjct: 181 H--SGSVYTTEKKAIPVLEEQGGGMSKEELDMMNSVMNKLFEIENVS 224

Query: 343  402
           
Sbjct: 241  224

Query: 403  462
           
Sbjct: 301  224

Query: 463  522
           
Sbjct: 361  224

Query: 523  582
           
Sbjct: 421  224

Query: 583  642
           
Sbjct: 481  224

Query: 643  702
           
Sbjct: 541  224

Query: 703  760
           
Sbjct: 601  224

[Close]

BLAST of MU53016 vs. TAIR10
Match: AT5G58130.1 (AT5G58130.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 180.6 bits (457), Expect = 1.2e-45
Identity = 101/221 (45.70%), Postives = 128/221 (57.92%), Query Frame = 1


Query: 115 QSASEKMRIYVGGLGASMTEDDLRKVFHSVGGVVEAVDFVRTKSRSFAYVDXXXXXXXXX 174
           +S+   +R++VGGLG S+  DDL K+F  +G  V+AV+FVRTK RSFAY+D         
Sbjct: 4   KSSGGGVRLHVGGLGESVGRDDLLKIFSPMG-TVDAVEFVRTKGRSFAYIDFSPSSTNSL 63

Query: 175 XXXXXTYNGCAWKGGKLRLEKAKENYLARLKREWEEDAQIRDSNVGADMEVVAPESTQHV 234
                TYNGC WKGG+LRLEKAKE+YLARLKREWE  +   D+ + A  +  +P +T   
Sbjct: 64  TKLFSTYNGCVWKGGRLRLEKAKEHYLARLKREWEAASSTSDNTIKAPSD--SPPAT--- 123

Query: 235 TKSEHINIFFPSLGEVKSLPISGTGTHKYD-XXXXXXXXXXXXXCDCEEHDVSSPIGNSK 294
               H+NIFFP L +VK +P+SGTG HKY               CDCEEH  SS     +
Sbjct: 124 ----HLNIFFPRLRKVKPMPLSGTGKHKYSFQRVPVSSSLPRSFCDCEEHSNSSL--TPR 183

Query: 295 DTKTRDLNAENGGMAEDEIEMMNAVMNKLFEREEASQSNCN 354
           +    DL A N G  E E+ +MN+VMNKLFE+        N
Sbjct: 184 EIHLHDLEAVNVGRQEAEVNVMNSVMNKLFEKNNVDPEEDN 212

Query: 355  414
           
Sbjct: 244  212

Query: 415  474
           
Sbjct: 304  212

Query: 475  534
           
Sbjct: 364  212

Query: 535  594
           
Sbjct: 424  212

Query: 595  654
           
Sbjct: 484  212

Query: 655  714
           
Sbjct: 544  212

Query: 715  774
           
Sbjct: 604  212

[Close]

BLAST of MU53016 vs. NCBI nr
Match: gi|659085871|ref|XP_008443653.1| (PREDICTED: uncharacterized protein LOC103487200 [Cucumis melo])

HSP 1 Score: 389.4 bits (999), Expect = 4.9e-105
Identity = 199/227 (87.67%), Postives = 200/227 (88.11%), Query Frame = 1


Query: 103 MERGQSASEKMRIYVGGLGASMTEDDLRKVFHSVGGVVEAVDFVRTKSRSFAYVDXXXXX 162
           MERGQSASEKMRIYVGGLGA+MTEDDLRKVFHSVGGVVEAVDFVRTKSRSFAYVD     
Sbjct: 1   MERGQSASEKMRIYVGGLGAAMTEDDLRKVFHSVGGVVEAVDFVRTKSRSFAYVDFFPSS 60

Query: 163 XXXXXXXXXTYNGCAWKGGKLRLEKAKENYLARLKREWEEDAQIRDSNVGADMEVVAPES 222
                    TYNGCAWKGGKLRLEKAKENYLARLKREWEEDAQIRDSNVGADMEVVAPES
Sbjct: 61  QSSLSKLFSTYNGCAWKGGKLRLEKAKENYLARLKREWEEDAQIRDSNVGADMEVVAPES 120

Query: 223 TQHVTKSEHINIFFPSLGEVKSLPISGTGTHKYDXXXXXXXXXXXXXCDCEEHDVSSPIG 282
           TQHVTKSEHINIFFPSLGEVKSLPISGTGTHKYD             CDCEEHDVSSPIG
Sbjct: 121 TQHVTKSEHINIFFPSLGEVKSLPISGTGTHKYDFPHVEVPPFPVHFCDCEEHDVSSPIG 180

Query: 283 NSKDTKTRDLNAENGGMAEDEIEMMNAVMNKLFEREEASQSNCNGSM 342
           NSKDTKTRDLNAENGGMAEDEIEMMNAVMNKLFEREEASQSNCNGSM
Sbjct: 181 NSKDTKTRDLNAENGGMAEDEIEMMNAVMNKLFEREEASQSNCNGSM 227

Query: 343  402
           
Sbjct: 241  227

Query: 403  462
           
Sbjct: 301  227

Query: 463  522
           
Sbjct: 361  227

Query: 523  582
           
Sbjct: 421  227

Query: 583  642
           
Sbjct: 481  227

Query: 643  702
           
Sbjct: 541  227

Query: 703  762
           
Sbjct: 601  227

Query: 763  784
           
Sbjct: 661  227

[Close]

BLAST of MU53016 vs. NCBI nr
Match: gi|778664026|ref|XP_004139156.2| (PREDICTED: uncharacterized protein LOC101203716 [Cucumis sativus])

HSP 1 Score: 360.9 bits (925), Expect = 1.9e-96
Identity = 183/227 (80.62%), Postives = 193/227 (85.02%), Query Frame = 1


Query: 103 MERGQSASEKMRIYVGGLGASMTEDDLRKVFHSVGGVVEAVDFVRTKSRSFAYVDXXXXX 162
           ME+GQSASE MRIYVGGLGA+MTEDDLRKVFHSVGGVVEAVDFVRTKSRSFAYVD     
Sbjct: 1   MEKGQSASENMRIYVGGLGAAMTEDDLRKVFHSVGGVVEAVDFVRTKSRSFAYVDFFPSS 60

Query: 163 XXXXXXXXXTYNGCAWKGGKLRLEKAKENYLARLKREWEEDAQIRDSNVGADMEVVAPES 222
                    TYNGCAWKGGKLRLEKAKENYLARL REWEEDAQIRD+NVGADME+VAPES
Sbjct: 61  QSSLSKLFSTYNGCAWKGGKLRLEKAKENYLARLNREWEEDAQIRDNNVGADMELVAPES 120

Query: 223 TQHVTKSEHINIFFPSLGEVKSLPISGTGTHKYDXXXXXXXXXXXXXCDCEEHDVSSPIG 282
           T+HVTKSEHINIFFPSLGEVK LPISGTGTHKYD             CDCEEH+ SSPIG
Sbjct: 121 TEHVTKSEHINIFFPSLGEVKPLPISGTGTHKYDFPHVEVPPFPVHFCDCEEHNASSPIG 180

Query: 283 NSKDTKTRDLNAENGGMAEDEIEMMNAVMNKLFEREEASQSNCNGSM 342
           NSK TKTRDLNAENGGM EDEI+MMNAV++KLFER+EASQSNCN SM
Sbjct: 181 NSKYTKTRDLNAENGGMDEDEIKMMNAVLSKLFERKEASQSNCNDSM 227

Query: 343  402
           
Sbjct: 241  227

Query: 403  462
           
Sbjct: 301  227

Query: 463  522
           
Sbjct: 361  227

Query: 523  582
           
Sbjct: 421  227

Query: 583  642
           
Sbjct: 481  227

Query: 643  702
           
Sbjct: 541  227

Query: 703  762
           
Sbjct: 601  227

Query: 763  784
           
Sbjct: 661  227

[Close]

BLAST of MU53016 vs. NCBI nr
Match: gi|565436443|ref|XP_006281609.1| (hypothetical protein CARUB_v10027727mg [Capsella rubella])

HSP 1 Score: 186.8 bits (473), Expect = 4.8e-44
Identity = 107/215 (49.77%), Postives = 136/215 (63.26%), Query Frame = 1


Query: 115 QSASEKMRIYVGGLGASMTEDDLRKVFHSVGGVVEAVDFVRTKSRSFAYVDXXXXXXXXX 174
           +S+   +R++VGGLG S+  DDL K+F  +G  V+AV+FVRTK RSFAY+D         
Sbjct: 4   KSSGGGVRLHVGGLGESVGRDDLLKIFSPMG-TVDAVEFVRTKGRSFAYIDFSPSSDKSL 63

Query: 175 XXXXXTYNGCAWKGGKLRLEKAKENYLARLKREWEEDAQIRDSNVGA--DMEVVAPESTQ 234
                TYNGC WKGG+LRLEKAKE+YLARLKREWEE +   DS + A  D  + AP  + 
Sbjct: 64  IKLFSTYNGCVWKGGRLRLEKAKEHYLARLKREWEEASSPCDSTIKAPSDNTIKAPSDS- 123

Query: 235 HVTKSEHINIFFPSLGEVKSLPISGTGTHKYD-XXXXXXXXXXXXXCDCEEHDVS-SPIG 294
             T S H+NIFFP L +VK++P+SGTG HKY               CDCEEH  S +P+ 
Sbjct: 124 --TPSTHLNIFFPRLRKVKAMPLSGTGKHKYSFQRVPLTSSLPKSICDCEEHSNSLTPL- 183

Query: 295 NSKDTKTRDLNAENGGMAEDEIEMMNAVMNKLFER 354
              +T   DL A N G  EDE+ +MN+VMNKLFE+
Sbjct: 184 ---ETHLHDLEALNVGRNEDEVNVMNSVMNKLFEK 210

Query: 355  414
           
Sbjct: 244  210

Query: 415  474
           
Sbjct: 304  210

Query: 475  534
           
Sbjct: 364  210

Query: 535  594
           
Sbjct: 424  210

Query: 595  654
           
Sbjct: 484  210

Query: 655  714
           
Sbjct: 544  210

Query: 715  748
           
Sbjct: 604  210

[Close]

BLAST of MU53016 vs. NCBI nr
Match: gi|923891342|ref|XP_013716743.1| (PREDICTED: dentin sialophosphoprotein-like [Brassica napus])

HSP 1 Score: 186.4 bits (472), Expect = 6.3e-44
Identity = 102/208 (49.04%), Postives = 133/208 (63.94%), Query Frame = 1


Query: 133 MRIYVGGLGASMTEDDLRKVFHSVGGVVEAVDFVRTKSRSFAYVDXXXXXXXXXXXXXXT 192
           +R++VGGLG S+  DDL K+F  +G  VEAV+FVRTK RSFAY+D              T
Sbjct: 14  VRLHVGGLGESVGRDDLLKIFSPMG-FVEAVEFVRTKGRSFAYIDFSPASENSLTKLFST 73

Query: 193 YNGCAWKGGKLRLEKAKENYLARLKREWEEDAQIRDSNVGADMEVVAPESTQHVTKSEHI 252
           YNGC WKGGKLRLEKAKE+Y+ARLKREW E A +   +  +D  V APE    +T S H+
Sbjct: 74  YNGCKWKGGKLRLEKAKEHYMARLKREWAESASV---SASSDDTVKAPEK---LTPSTHL 133

Query: 253 NIFFPSLGEVKSLPISGTGTHKYD-XXXXXXXXXXXXXCDCEEHDVSSPIGNSKDTKTRD 312
           NIFFP L +VK++P+SGTG HKY               CDCEEH  S      ++T  RD
Sbjct: 134 NIFFPRLRKVKAMPLSGTGKHKYSFQRVAVPSLLPKTFCDCEEHSASL---TPQETHARD 193

Query: 313 LNAENGGMAEDEIEMMNAVMNKLFEREE 372
           + A N G+ E+E+ +MN+VMNKL ++++
Sbjct: 194 VEALNVGINEEEVNIMNSVMNKLLQKDD 211

Query: 373  432
           
Sbjct: 254  211

Query: 433  492
           
Sbjct: 314  211

Query: 493  552
           
Sbjct: 374  211

Query: 553  612
           
Sbjct: 434  211

Query: 613  672
           
Sbjct: 494  211

Query: 673  732
           
Sbjct: 554  211

Query: 733  754
           
Sbjct: 614  211

[Close]

BLAST of MU53016 vs. NCBI nr
Match: gi|685374083|ref|XP_009120326.1| (PREDICTED: dentin sialophosphoprotein [Brassica rapa])

HSP 1 Score: 186.4 bits (472), Expect = 6.3e-44
Identity = 103/215 (47.91%), Postives = 134/215 (62.33%), Query Frame = 1


Query: 112 GQSASEKMRIYVGGLGASMTEDDLRKVFHSVGGVVEAVDFVRTKSRSFAYVDXXXXXXXX 171
           G      +R++VGGLG S+  DDL K+F  +G  VEAV+FVRTK RSFAY+D        
Sbjct: 5   GSGGGGGVRLHVGGLGESVGRDDLLKIFSPMG-FVEAVEFVRTKGRSFAYIDFSPASENS 64

Query: 172 XXXXXXTYNGCAWKGGKLRLEKAKENYLARLKREWEEDAQIRDSNVGADMEVVAPESTQH 231
                 TYNGC WKGGKLRLEKAKE+Y+ARLKREW E A +   +  +D  V APE    
Sbjct: 65  LTKLFSTYNGCKWKGGKLRLEKAKEHYMARLKREWAESASV---SASSDDTVKAPEK--- 124

Query: 232 VTKSEHINIFFPSLGEVKSLPISGTGTHKYD-XXXXXXXXXXXXXCDCEEHDVSSPIGNS 291
           +T S H+NIFFP L +VK++P+SGTG HKY               CDCEEH  S      
Sbjct: 125 LTPSTHLNIFFPRLRKVKAMPLSGTGKHKYSFQRVAVPSLLPKTFCDCEEHSASL---TP 184

Query: 292 KDTKTRDLNAENGGMAEDEIEMMNAVMNKLFEREE 351
           ++T  RD+ A N G+ E+E+ +MN+VMNKL ++++
Sbjct: 185 QETHARDVEALNVGINEEEVNIMNSVMNKLLQKDD 209

Query: 352  411
           
Sbjct: 245  209

Query: 412  471
           
Sbjct: 305  209

Query: 472  531
           
Sbjct: 365  209

Query: 532  591
           
Sbjct: 425  209

Query: 592  651
           
Sbjct: 485  209

Query: 652  711
           
Sbjct: 545  209

Query: 712  754
           
Sbjct: 605  209

The following BLAST results are available for this feature:

BLAST of MU53016 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXQ1_CUCSA	2.4e-98	80.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G651690 PE=4 SV=1	[more]
M4CEN9_BRARP	2.3e-45	47.91	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]
R0EZ19_9BRAS	3.0e-45	49.77	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10027727mg PE=4 SV=1	[more]
A0A078I2R0_BRANA	6.7e-45	47.95	BnaC09g33640D protein OS=Brassica napus GN=BnaC09g33640D PE=4 SV=1	[more]
A0A067K686_JATCU	1.5e-44	44.49	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19789 PE=4 SV=1	[more]

BLAST of MU53016 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G58130.1	1.2e-45	45.70	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

BLAST of MU53016 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659085871\|ref\|XP_008443653.1\|	4.9e-105	87.67	PREDICTED: uncharacterized protein LOC103487200 [Cucumis melo]	[more]
gi\|778664026\|ref\|XP_004139156.2\|	1.9e-96	80.62	PREDICTED: uncharacterized protein LOC101203716 [Cucumis sativus]	[more]
gi\|565436443\|ref\|XP_006281609.1\|	4.8e-44	49.77	hypothetical protein CARUB_v10027727mg [Capsella rubella]	[more]
gi\|923891342\|ref\|XP_013716743.1\|	6.3e-44	49.04	PREDICTED: dentin sialophosphoprotein-like [Brassica napus]	[more]
gi\|685374083\|ref\|XP_009120326.1\|	6.3e-44	47.91	PREDICTED: dentin sialophosphoprotein [Brassica rapa]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C010014	MELO3C010014	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
PEa0009B19	PEa0009B19	EST
PS30A11	PS30A11	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 47..91 score: 1.
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 46..118 score: 3.
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 45..122 score: 12
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	G3DSA:3.30.70.330		coord: 33..123 score: 7.8
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 32..125 score: 1.11
None	No IPR available	PANTHER	PTHR23099	TRANSCRIPTIONAL REGULATOR	coord: 34..258 score: 8.7
None	No IPR available	PANTHER	PTHR23099:SF0	ACIDIC REPEAT-CONTAINING PROTEIN	coord: 34..258 score: 8.7