MELO3C011410 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C011410
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	MADS-box transcription factor
Location	chr3 : 23930814 .. 23931032 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGGGGAAGAGTAGAGTTGAAGAAGATAGAGAACAAAATAAATCGACAAGTTACATTCACAAAAAGAAGAAATGGACTTCTTAAAAAGGCTTATGAACTCTCCATTTTGTGTGATGCTGAAGTTGCTTTGATCGTCTTCTCCGCTCGTGGCAAACTCTATGAATTCTCAAGCTCTTCCAGGCATGTTTTCAATCATTTTCTTTCTTTTTATTAA

mRNA sequence

ATGGGAAGGGGAAGAGTAGAGTTGAAGAAGATAGAGAACAAAATAAATCGACAAGTTACATTCACAAAAAGAAGAAATGGACTTCTTAAAAAGGCTTATGAACTCTCCATTTTGTGTGATGCTGAAGTTGCTTTGATCGTCTTCTCCGCTCGTGGCAAACTCTATGAATTCTCAAGCTCTTCCAGGCATGTTTTCAATCATTTTCTTTCTTTTTATTAA

Coding sequence (CDS)

ATGGGAAGGGGAAGAGTAGAGTTGAAGAAGATAGAGAACAAAATAAATCGACAAGTTACATTCACAAAAAGAAGAAATGGACTTCTTAAAAAGGCTTATGAACTCTCCATTTTGTGTGATGCTGAAGTTGCTTTGATCGTCTTCTCCGCTCGTGGCAAACTCTATGAATTCTCAAGCTCTTCCAGGCATGTTTTCAATCATTTTCTTTCTTTTTATTAA

Protein sequence

MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSSSSRHVFNHFLSFY*

Homology

[Close]

BLAST of MELO3C011410 vs. Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 3.4e-24
Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 1


Query: 1  MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSSS 60
          MGRGRVELK+IENKINRQVTF KRRNGLLKKAYELS+LCDAEVALI+FS RGKLYEF SS
Sbjct: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61 S 62
          S
Sbjct: 61 S 61

[Close]

BLAST of MELO3C011410 vs. Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 3.4e-24
Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 1


Query: 1  MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSSS 60
          MGRGRVELK+IENKINRQVTF KRRNGLLKKAYELS+LCDAEVALI+FS RGKLYEF SS
Sbjct: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61 S 62
          S
Sbjct: 61 S 61

[Close]

BLAST of MELO3C011410 vs. Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 3.4e-24
Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 1


Query: 1  MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSSS 60
          MGRGRVELK+IENKINRQVTF KRRNGLLKKAYELS+LCDAEVALI+FS RGKLYEF SS
Sbjct: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61 S 62
          S
Sbjct: 61 S 61

[Close]

BLAST of MELO3C011410 vs. Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 3.4e-24
Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 1


Query: 1  MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSSS 60
          MGRGRVELK+IENKINRQVTF KRRNGLLKKAYELS+LCDAEVALI+FS RGKLYEF SS
Sbjct: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61 S 62
          S
Sbjct: 61 S 61

[Close]

BLAST of MELO3C011410 vs. Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 5.8e-24
Identity = 53/60 (88.33%), Postives = 57/60 (95.00%), Query Frame = 1


Query: 1  MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSSS 60
          MGRGRVELK+IENKINRQVTF+KRRNGLLKKAYELS+LCDAEVALI+FS+RGKLYEF S+
Sbjct: 1  MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

[Close]

BLAST of MELO3C011410 vs. TrEMBL
Match: A0A118JYX2_CYNCS (Transcription factor, K-box OS=Cynara cardunculus var. scolymus GN=Ccrd_023302 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.4e-24
Identity = 59/72 (81.94%), Postives = 65/72 (90.28%), Query Frame = 1


Query: 1  MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSSS 60
          MGRGRVELK+IENKINRQVTF KRRNGLLKKAYELS+LCDAEVALI+FS RGKLYEF SS
Sbjct: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61 SRHVFNHFLSFY 73
          SR++    LSF+
Sbjct: 61 SRYITFFLLSFF 72

[Close]

BLAST of MELO3C011410 vs. TrEMBL
Match: A0A151TY11_CAJCA (Developmental protein SEPALLATA 3 OS=Cajanus cajan GN=KK1_011131 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-23
Identity = 56/65 (86.15%), Postives = 62/65 (95.38%), Query Frame = 1


Query: 1  MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSSS 60
          MGRGRVELK+IENKINRQVTF KRRNGLLKKAYELS+LCDAEVALI+FS RGKLYEF SS
Sbjct: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61 SRHVF 66
          SR+++
Sbjct: 61 SRYIY 65

[Close]

BLAST of MELO3C011410 vs. TrEMBL
Match: M0ZP50_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001938 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-23
Identity = 57/70 (81.43%), Postives = 63/70 (90.00%), Query Frame = 1


Query: 1  MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSSS 60
          MGRG+VELK+IENKINRQVTF KRRNGLLKKAYELSILC+AEVALI+FS RGKLYEF S+
Sbjct: 1  MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSILCEAEVALIIFSNRGKLYEFCST 60

Query: 61 SRHVFNHFLS 71
          SRH+    LS
Sbjct: 61 SRHILGEDLS 70

[Close]

BLAST of MELO3C011410 vs. TrEMBL
Match: A0A151RCR0_CAJCA (Agamous-like MADS-box protein AGL9 isogeny OS=Cajanus cajan GN=KK1_038257 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.6e-23
Identity = 57/64 (89.06%), Postives = 60/64 (93.75%), Query Frame = 1


Query: 1  MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSSS 60
          MGRGRVELK+IENKINRQVTF KRRNGLLKKAYELS+LCDAEVALI+FS RGKLYEF SS
Sbjct: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCSS 60

Query: 61 SRHV 65
          SR V
Sbjct: 61 SRFV 64

[Close]

BLAST of MELO3C011410 vs. TrEMBL
Match: A0A151SPN8_CAJCA (Agamous-like MADS-box protein AGL9 isogeny OS=Cajanus cajan GN=KK1_002968 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.5e-23
Identity = 56/63 (88.89%), Postives = 61/63 (96.83%), Query Frame = 1


Query: 1  MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSSS 60
          MGRGRVELK+IENKINRQVTF KRRNGLLKKAYELS+LCDAEVALI+FS RGKLYEFSS+
Sbjct: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFSST 60

Query: 61 SRH 64
          SR+
Sbjct: 61 SRY 63

[Close]

BLAST of MELO3C011410 vs. TAIR10
Match: AT1G24260.2 (AT1G24260.2 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 111.7 bits (278), Expect = 1.9e-25
Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 1


Query: 1  MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSSS 60
          MGRGRVELK+IENKINRQVTF KRRNGLLKKAYELS+LCDAEVALI+FS RGKLYEF SS
Sbjct: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61 S 62
          S
Sbjct: 61 S 61

[Close]

BLAST of MELO3C011410 vs. TAIR10
Match: AT5G15800.2 (AT5G15800.2 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 111.7 bits (278), Expect = 1.9e-25
Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 1


Query: 1  MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSSS 60
          MGRGRVELK+IENKINRQVTF KRRNGLLKKAYELS+LCDAEVALI+FS RGKLYEF SS
Sbjct: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61 S 62
          S
Sbjct: 61 S 61

[Close]

BLAST of MELO3C011410 vs. TAIR10
Match: AT3G02310.1 (AT3G02310.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 109.8 bits (273), Expect = 7.3e-25
Identity = 54/61 (88.52%), Postives = 56/61 (91.80%), Query Frame = 1


Query: 1  MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSSS 60
          MGRGRVELK+IENKINRQVTF KRRNGLLKKAYELS+LCDAEV+LIVFS RGKLYEF S+
Sbjct: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST 60

Query: 61 S 62
          S
Sbjct: 61 S 61

[Close]

BLAST of MELO3C011410 vs. TAIR10
Match: AT2G45650.1 (AT2G45650.1 AGAMOUS-like 6)

HSP 1 Score: 109.8 bits (273), Expect = 7.3e-25
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = 1


Query: 1  MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSS 60
          MGRGRVE+K+IENKINRQVTF+KRRNGLLKKAYELS+LCDAEVALI+FS+RGKLYEF S
Sbjct: 1  MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 59

[Close]

BLAST of MELO3C011410 vs. TAIR10
Match: AT2G03710.1 (AT2G03710.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 107.8 bits (268), Expect = 2.8e-24
Identity = 51/60 (85.00%), Postives = 55/60 (91.67%), Query Frame = 1


Query: 1  MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSSS 60
          MGRG+VELK+IENKINRQVTF KRRNGLLKKAYELS+LCDAE+AL++FS RGKLYEF SS
Sbjct: 1  MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60

[Close]

BLAST of MELO3C011410 vs. NCBI nr
Match: gi|976911832|gb|KVH98467.1| (Transcription factor, K-box [Cynara cardunculus var. scolymus])

HSP 1 Score: 119.8 bits (299), Expect = 2.0e-24
Identity = 59/72 (81.94%), Postives = 65/72 (90.28%), Query Frame = 1


Query: 1  MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSSS 60
          MGRGRVELK+IENKINRQVTF KRRNGLLKKAYELS+LCDAEVALI+FS RGKLYEF SS
Sbjct: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61 SRHVFNHFLSFY 73
          SR++    LSF+
Sbjct: 61 SRYITFFLLSFF 72

[Close]

BLAST of MELO3C011410 vs. NCBI nr
Match: gi|659089304|ref|XP_008445436.1| (PREDICTED: truncated transcription factor CAULIFLOWER A [Cucumis melo])

HSP 1 Score: 119.8 bits (299), Expect = 2.0e-24
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 1


Query: 1  MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSSS 60
          MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSSS
Sbjct: 1  MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSSS 60

Query: 61 S 62
          S
Sbjct: 61 S 61

[Close]

BLAST of MELO3C011410 vs. NCBI nr
Match: gi|778715500|ref|XP_011657406.1| (PREDICTED: MADS-box protein CMB1 [Cucumis sativus])

HSP 1 Score: 117.9 bits (294), Expect = 7.6e-24
Identity = 59/60 (98.33%), Postives = 60/60 (100.00%), Query Frame = 1


Query: 1  MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSSS 60
          MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALI+FSARGKLYEFSSS
Sbjct: 1  MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIIFSARGKLYEFSSS 60

[Close]

BLAST of MELO3C011410 vs. NCBI nr
Match: gi|1012360670|gb|KYP71854.1| (Developmental protein SEPALLATA 3 [Cajanus cajan])

HSP 1 Score: 116.7 bits (291), Expect = 1.7e-23
Identity = 56/65 (86.15%), Postives = 62/65 (95.38%), Query Frame = 1


Query: 1  MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSSS 60
          MGRGRVELK+IENKINRQVTF KRRNGLLKKAYELS+LCDAEVALI+FS RGKLYEF SS
Sbjct: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61 SRHVF 66
          SR+++
Sbjct: 61 SRYIY 65

[Close]

BLAST of MELO3C011410 vs. NCBI nr
Match: gi|1012328788|gb|KYP40408.1| (Agamous-like MADS-box protein AGL9 isogeny [Cajanus cajan])

HSP 1 Score: 115.5 bits (288), Expect = 3.8e-23
Identity = 57/64 (89.06%), Postives = 60/64 (93.75%), Query Frame = 1


Query: 1  MGRGRVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSARGKLYEFSSS 60
          MGRGRVELK+IENKINRQVTF KRRNGLLKKAYELS+LCDAEVALI+FS RGKLYEF SS
Sbjct: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCSS 60

Query: 61 SRHV 65
          SR V
Sbjct: 61 SRFV 64

The following BLAST results are available for this feature:

BLAST of MELO3C011410 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AGL9_SINAL	3.4e-24	90.16	Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1	[more]
AGL9_PETHY	3.4e-24	90.16	Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2	[more]
SEP1_ARATH	3.4e-24	90.16	Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2	[more]
SEP3_ARATH	3.4e-24	90.16	Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1	[more]
MADS6_ORYSJ	5.8e-24	88.33	MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV...	[more]

BLAST of MELO3C011410 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A118JYX2_CYNCS	1.4e-24	81.94	Transcription factor, K-box OS=Cynara cardunculus var. scolymus GN=Ccrd_023302 P...	[more]
A0A151TY11_CAJCA	1.2e-23	86.15	Developmental protein SEPALLATA 3 OS=Cajanus cajan GN=KK1_011131 PE=4 SV=1	[more]
M0ZP50_SOLTU	1.5e-23	81.43	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001938 PE=4 SV=1	[more]
A0A151RCR0_CAJCA	2.6e-23	89.06	Agamous-like MADS-box protein AGL9 isogeny OS=Cajanus cajan GN=KK1_038257 PE=4 S...	[more]
A0A151SPN8_CAJCA	3.5e-23	88.89	Agamous-like MADS-box protein AGL9 isogeny OS=Cajanus cajan GN=KK1_002968 PE=4 S...	[more]

BLAST of MELO3C011410 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G24260.2	1.9e-25	90.16	K-box region and MADS-box transcription factor family protein	[more]
AT5G15800.2	1.9e-25	90.16	K-box region and MADS-box transcription factor family protein	[more]
AT3G02310.1	7.3e-25	88.52	K-box region and MADS-box transcription factor family protein	[more]
AT2G45650.1	7.3e-25	88.14	AGAMOUS-like 6	[more]
AT2G03710.1	2.8e-24	85.00	K-box region and MADS-box transcription factor family protein	[more]

BLAST of MELO3C011410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|976911832\|gb\|KVH98467.1\|	2.0e-24	81.94	Transcription factor, K-box [Cynara cardunculus var. scolymus]	[more]
gi\|659089304\|ref\|XP_008445436.1\|	2.0e-24	100.00	PREDICTED: truncated transcription factor CAULIFLOWER A [Cucumis melo]	[more]
gi\|778715500\|ref\|XP_011657406.1\|	7.6e-24	98.33	PREDICTED: MADS-box protein CMB1 [Cucumis sativus]	[more]
gi\|1012360670\|gb\|KYP71854.1\|	1.7e-23	86.15	Developmental protein SEPALLATA 3 [Cajanus cajan]	[more]
gi\|1012328788\|gb\|KYP40408.1\|	3.8e-23	89.06	Agamous-like MADS-box protein AGL9 isogeny [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002100	TF_MADSbox

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0046983	protein dimerization activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001708	cell fate specification
biological_process	GO:0048438	floral whorl development
biological_process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
biological_process	GO:0048443	stamen development
biological_process	GO:0048442	sepal development
biological_process	GO:0048441	petal development
biological_process	GO:0010076	maintenance of floral meristem identity
biological_process	GO:0048440	carpel development
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0048827	phyllome development
biological_process	GO:0048437	floral organ development
biological_process	GO:0048833	specification of floral organ number
biological_process	GO:0048507	meristem development
biological_process	GO:0010093	specification of floral organ identity
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0048481	plant ovule development
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C011410T1	MELO3C011410T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 5.5E-33coord: 38..59 score: 5.5E-33coord: 23..38 score: 5.5
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 score: 1.3
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 score: 1.7
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57 scor
IPR002100	Transcription factor, MADS-box	PROFILE	PS50066	MADS_BOX_2	coord: 1..61 score: 33
IPR002100	Transcription factor, MADS-box	unknown	SSF55455	SRF-like	coord: 2..65 score: 1.07
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 2..61 score: 2.9
None	No IPR available	PANTHER	PTHR11945:SF194	AGAMOUS-LIKE MADS-BOX PROTEIN AGL3-RELATED	coord: 2..61 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C011410	Cla022037	Watermelon (97103) v1	mewmB301
MELO3C011410	Cla97C08G153390	Watermelon (97103) v2	mewmbB303
MELO3C011410	Cla97C04G078450	Watermelon (97103) v2	mewmbB292
MELO3C011410	Bhi04G000928	Wax gourd	mewgoB328
MELO3C011410	Bhi08G000889	Wax gourd	mewgoB360
MELO3C011410	CSPI06G19780	Wild cucumber (PI 183967)	cpimeB464
MELO3C011410	CSPI01G06340	Wild cucumber (PI 183967)	cpimeB063
MELO3C011410	Cucsa.113420	Cucumber (Gy14) v1	cgymeB162
MELO3C011410	Cucsa.327970	Cucumber (Gy14) v1	cgymeB539
MELO3C011410	CmaCh12G001070	Cucurbita maxima (Rimu)	cmameB157
MELO3C011410	CmoCh12G000870	Cucurbita moschata (Rifu)	cmomeB147
MELO3C011410	CsGy1G006030	Cucumber (Gy14) v2	cgybmeB058
MELO3C011410	Carg20580	Silver-seed gourd	carmeB0649
MELO3C011410	CsaV3_1G006210	Cucumber (Chinese Long) v3	cucmeB062
MELO3C011410	CsaV3_6G033790	Cucumber (Chinese Long) v3	cucmeB475

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
MELO3C011410	MELO3C002049	Melon (DHL92) v3.5.1	memeB070

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C011410	Cucurbita pepo (Zucchini)	cpemeB036
MELO3C011410	Cucurbita pepo (Zucchini)	cpemeB088
MELO3C011410	Cucurbita pepo (Zucchini)	cpemeB755
MELO3C011410	Bottle gourd (USVL1VR-Ls)	lsimeB470
MELO3C011410	Cucumber (Gy14) v2	cgybmeB406
MELO3C011410	Silver-seed gourd	carmeB0103
MELO3C011410	Silver-seed gourd	carmeB0142
MELO3C011410	Cucurbita maxima (Rimu)	cmameB724
MELO3C011410	Cucurbita moschata (Rifu)	cmomeB367
MELO3C011410	Cucurbita moschata (Rifu)	cmomeB715
MELO3C011410	Cucumber (Chinese Long) v2	cumeB466
MELO3C011410	Watermelon (Charleston Gray)	mewcgB296