CU087023 (transcribed_cluster) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
GAATGATGAGTCCGTCACCAGAGAGATTGCAATGGCGCTAGTTCAGCCACACACTCCAGCTTCTTCAATTTCATCTTCATCCGCTTCATTGTTCGGAACTTATCTTCAACAATTCCGTCCGCTCACCACAACCCTTAATCTTCGAAGCAACCACTCTATCTCTCATCGTTCCACCTGCAGAGCTTCCTGGCAGGAGCTTGCAGGTGTTCTAATATTCTCTGCAATTCCTTTCACGGCGGTTAAAGCCATTGCTAATAGCCCCACTTGGAGGGGTCGCTCCAGAGACAATTGGAAAAGAAGAAAAATTCTGCCGTAGCCAACTCTTCCAAGTTCAAGGCTCTTGCTGAGGAGGCTAGAAAAGATAGCTTT
BLAST of CU087023 vs. TrEMBL
Match: A0A0A0L3G2_CUCSA (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus GN=Csa_4G664560 PE=3 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 9.2e-29 Identity = 69/90 (76.67%), Postives = 71/90 (78.89%), Query Frame = 2
BLAST of CU087023 vs. TrEMBL
Match: A0A0D2QHW9_GOSRA (Chlorophyll a-b binding protein, chloroplastic OS=Gossypium raimondii GN=B456_003G092700 PE=3 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 3.6e-09 Identity = 37/64 (57.81%), Postives = 43/64 (67.19%), Query Frame = 2
BLAST of CU087023 vs. TrEMBL
Match: A0A087HIX2_ARAAL (Chlorophyll a-b binding protein, chloroplastic OS=Arabis alpina GN=AALP_AA2G207800 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.1e-08 Identity = 37/64 (57.81%), Postives = 42/64 (65.62%), Query Frame = 2
BLAST of CU087023 vs. TrEMBL
Match: B9H5X9_POPTR (Chlorophyll a-b binding protein, chloroplastic OS=Populus trichocarpa GN=POPTR_0005s28000g PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 6.8e-08 Identity = 43/97 (44.33%), Postives = 52/97 (53.61%), Query Frame = 2
BLAST of CU087023 vs. TrEMBL
Match: D7UDH1_VITVI (Chlorophyll a-b binding protein, chloroplastic OS=Vitis vinifera GN=VIT_18s0122g00430 PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 8.9e-08 Identity = 35/57 (61.40%), Postives = 40/57 (70.18%), Query Frame = 2
BLAST of CU087023 vs. NCBI nr
Match: gi|659105213|ref|XP_008453033.1| (PREDICTED: chlorophyll a-b binding protein of LHCII type 1 isoform X2 [Cucumis melo]) HSP 1 Score: 134.4 bits (337), Expect = 1.3e-28 Identity = 67/94 (71.28%), Postives = 72/94 (76.60%), Query Frame = 2
BLAST of CU087023 vs. NCBI nr
Match: gi|659105211|ref|XP_008453032.1| (PREDICTED: chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis melo]) HSP 1 Score: 134.4 bits (337), Expect = 1.3e-28 Identity = 67/94 (71.28%), Postives = 72/94 (76.60%), Query Frame = 2
BLAST of CU087023 vs. NCBI nr
Match: gi|659105215|ref|XP_008453034.1| (PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic isoform X3 [Cucumis melo]) HSP 1 Score: 134.4 bits (337), Expect = 1.3e-28 Identity = 67/94 (71.28%), Postives = 72/94 (76.60%), Query Frame = 2
BLAST of CU087023 vs. NCBI nr
Match: gi|659105217|ref|XP_008453035.1| (PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic isoform X4 [Cucumis melo]) HSP 1 Score: 134.4 bits (337), Expect = 1.3e-28 Identity = 67/94 (71.28%), Postives = 72/94 (76.60%), Query Frame = 2
BLAST of CU087023 vs. NCBI nr
Match: gi|778697301|ref|XP_011654292.1| (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like isoform X2 [Cucumis sativus]) HSP 1 Score: 134.0 bits (336), Expect = 1.7e-28 Identity = 69/90 (76.67%), Postives = 71/90 (78.89%), Query Frame = 2
The following BLAST results are available for this feature:
The following terms have been associated with this transcribed_cluster:
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
This transcribed_cluster is associated with the following gene feature(s):
The following EST feature(s) are a part of this transcribed_cluster:
Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
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